Malate: Quinone oxidoreductase is essential for growth on ethanol or acetate in Pseudomonas aeruginosa

Microbiology

Volumn 148, Issue 12, 2002, Pages 3839-3847

  Kretzschmar, Utta ^a   Rückert, Andreas ^a   Jeoung, Jae Hun ^a   Görisch, Helmut ^a  

^a TECHNISCHE UNIVERSITÄT BERLIN   (Germany)

Author keywords

Ethanol oxidation; Malate conversion; Malic enzyme; Pyruvate carboxylase

Indexed keywords

ACETIC ACID; ALCOHOL; GLUCOSE; GLYOXYLIC ACID; LACTIC ACID; MALATE DEHYDROGENASE (NADP); OXALOACETIC ACID; PYRUVATE CARBOXYLASE; QUINONE DERIVATIVE; SUCCINIC ACID;

ALLELE; BACTERIAL GENOME; BACTERIAL GROWTH; CARBOXYLATION; CITRIC ACID CYCLE; CONTROLLED STUDY; ENZYME ACTIVITY; GENE EXPRESSION; GENE MUTATION; GENETIC CODE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PRIORITY JOURNAL; PSEUDOMONAS AERUGINOSA; REVIEW;

BACTERIA (MICROORGANISMS); NEGIBACTERIA; PSEUDOMONAS; PSEUDOMONAS AERUGINOSA;

EID: 0036956336     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/00221287-148-12-3839     Document Type: Review

References (40)

1. Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
2. Armstrong, J. McD. (1964). The molar extinction coefficient of 2,6-dichlorophenol indophenol. Biochim Biophys Acta 86, 194-197.
3. Austin, D. & Larson, T. J. (1991). Nucleotide sequence of the glpD gene encoding aerobic sn-glycerol 3-phosphate dehydrogenase of Escherichia coli K-12. J Bacteriol 173, 101-107.
4. Bergmeyer, J. & Gralßl, M. (1987). Methods of Enzymatic Analysis, 3rd edn. Weinheim: VCH.
5. Boyer, H. W. & Roulland-Dussoix, D. (1969). A complementation analysis of the restriction and modification of DNA in Escherichia coli. J Mol Biol 14, 459-472.
6. Cetin, E. T., Töreci, K. I. & Ang, Ö. (1965). Encapsulated Pseudomonas aeruginosa (Pseudomonas mucosus) strains. J Bacteriol 89, 1432-1433.
7. Diehl, A., von Wintzingerode, F. & Görisch, H. (1998). Quinoprotein ethanol dehydrogenase of Pseudomonas aeruginosa is a homodimer - sequence of the gene and deduced structural properties of the enzyme. Eur J Biochem 257, 409-419.
8. Diesterhaft, M. D. & Freese, E. (1973). Role of pyruvate carboxylase, phosphoenolpyruvate carboxykinase, and malic enzyme during growth and sporulation of Bacillus subtilis. J Biol Chem 248, 6062-6070.
9. Figurski, D. H. & Helinski, D. R. (1979). Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in trans. Proc Natl Acad Sci USA 76, 1648-1652.
10. Geiger, O. & Görisch, H. (1987). Enzymatic determination of pyrroloquinoline quinone using crude membranes from Escherichia coli. Anal Biochem 164, 418-423.
11. Groves, W. E., Davis, F. C., Jr & Sells, B. H. (1968). Spectrophotometric determination of microgram quantities of protein without nucleic acid interference. Anal Biochem 22, 195-210.
12. Hanahan, D. (1983). Studies on transformation of Escherichia coli with plasmids. J Mol Biol 166, 557-580.
13. Hauck, R., Adrian, L., Wendler, P., Amidjojo, M., Hegemann, W. & Görisch, H. (2001). Transformation of 2,2′-dichlorodiisopropyl ether in mixed and pure culture. Appl Microbiol Biotechnol 56, 491-495.
14. Hopper, D. J., Chapman, P. J. & Dagley, S. (1970). Metabolism of L-malate and D-malate by a species of Pseudomonas. J Bacteriol 104, 1197-1202.
15. Horecker, B. L. & Kornberg, A. (1948). The extinction coefficients of the reduced band of pyridine nucleotides. J Biol Chem 175, 385-390.
16. Kather, B., Stingl, K., van der Rest, M. E., Altendorf, K. & Molenaar, D. (2000). Another unusual type of citric acid cycle enzyme in Helicobacter pylori: the malate:quinone oxidoreductase. J Bacteriol 182, 3204-3209.
17. Kretzschmar, U., Schobert, M. & Görisch, H. (2001). The Pseudomonas aeruginosa acsA gene, encoding an acetyl-CoA synthetase, is essential for growth on ethanol. Microbiology 147, 2671-2677.
18. Leighton, M. P., Kelly, D. J., Williamson, M. P. & Shaw, J. G. (2001). An NMR and enzyme study of the carbon metabolism of Neisseria meningitidis. Microbiology 147, 1473-1482.
19. Mizuno, T. & Kageyama, M. (1978). Separation and characterization of the outer membrane of Pseudomonas aeruginosa. J Biochem 84, 179-191.
20. Molenaar, D., van der Rest, M. E. & Petroviæ, S. (1998). Biochemical and genetic characterization of the membrane-associated malate dehydrogenase (acceptor) from Corynebacterium glutamicum. Eur J Biochem 254, 395-403.
21. Molenaar, D., van der Rest, M. E., Drysch, A. & Yücel, R. (2000). Functions of the membrane-associated and cytoplasmic malate dehydrogenases in the citric acid cycle of Corynebacterium glutamicum. J Bacteriol 182, 6884-6891.
22. O'Brien, R. W. & Taylor, B. L. (1977). Formation and dissimilation of oxaloacetate and pyruvate in Pseudomonas citronellolis grown on noncarbohydrate substrates. J Bacteriol 130, 131-135.
23. O'Brien, R. W., Chuang, D. T., Taylor, B. L. & Utter, M. F. (1977). Novel enzymic machinery for the metabolism of oxaloacetate, phosphoenolpyruvate, and pyruvate in Pseudomonas citronellolis. J Biol Chem 252, 1257-1263.
24. Peters-Wendisch, P. G., Wendisch, V. F., Paul, S., Eikmanns, B. J. & Sahm, H. (1997). Pyruvate carboxylase as an anaplerotic enzyme in Corynebacterium glutamicum. Microbiology 143, 1095-1103.
25. 550 from Pseudomonas aeruginosa. Biochem J 289, 173-178.
26. Roehl, R. A., Feary, T. W. & Phibbs, P. V., Jr (1983). Clustering of mutations affecting central pathway enzymes of carbohydrate catabolism in Pseudomonas aeruginosa. J Bacteriol 156, 1123-1129.
27. Rothmel, R. K., Chakrabarty, A. M., Berry, A. & Darzins, A. (1991). Genetic systems in Pseudomonas. Methods Enzymol 204, 485-514.
28. Rupp, M. & Görisch, H. (1988). Purification, crystallization and characterization of quinoprotein ethanol dehydrogenase from Pseudomonas aeruginosa. Biol Chem Hoppe Seyler 369, 431-439.
29. Saeki, A., Matsushita, K., Takeno, S., Taniguchi, M., Toyama, H., Theeragool, G., Lotong, N. & Adachi, O. (1999). Enzymes responsible for acetate oxidation by acetic acid bacteria. Biosci Biotechnol Biochem 63, 2102-2109.
30. Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
31. 550 and an adjacent acetaldehyde dehydrogenase. Microbiology 145, 471-481.
32. 550 of the ethanol-oxidation system in Pseudomonas aeruginosa. Microbiology 147, 363-372.
33. Schweizer, H. P., Klassen, T. R. & Hoang, T. (1996). Improved methods for gene analysis in Pseudomonas. In Molecular Biology of Pseudomonads, pp. 229-237. Edited by T. Nakazawa, K. Furukawa, D. Haas & S. Silver. Washington, DC: American Society for Microbiology.
34. Simon, R., O'Connell, M., Labes, M. & Pühler, A. (1986). Plasmid vectors for the genetic analysis and manipulation of rhizobia and other gram-negative bacteria. Methods Enzymol 118, 640-659.
35. Smith, A. W. & Iglewski, B. H. (1989). Transformation of Pseudomonas aeruginosa by electroporation. Nucleic Acids Res 17, 10509.
36. Staskawicz, B., Dahlbeck, D., Keen, N. & Napoli, C. (1987). Molecular characterization of cloned avirulence genes from race 0 to race 1 of Pseudomonas syringae pv. glycinea. J Bacteriol 169, 5789-5794.
37. van der Rest, M. E., Frank, C. & Molenaar, D. (2000). Functions of the membrane-associated and cytoplasmic malate dehydrogenases in the citric acid cycle of Escherichia coli. J Bacteriol 182, 6892-6899.
38. Voegele, R. T., Mitsch, M. J. & Finan, T. M. (1999). Characterization of two members of a novel malic enzyme class. Biochim Biophys Acta 1432, 275-285.
39. Wendisch, V. F., de Graaf, A. A., Sahm, H. & Eikmann, B. J. (2000). Quantitative determination of metabolic fluxes during coutilization of two carbon sources: comparative analyses with Corynebacterium glutamicum during growth on acetate and/or glucose. J Bacteriol 182, 3088-3096.
40. Yanisch-Perron, C., Vieira, J. & Messing, J. (1985). Improved M13 phage cloning vectors and host strains: nucleotide sequence of the M13mp18 and pUC19 vectors. Gene 33, 103-119.