Physical map-based sizes of the centromeric regions of Arabidopsis thaliana chromosomes 1, 2, and 3

DNA Research

Volumn 9, Issue 4, 2002, Pages 117-121

  Hosouchi, Tsutomu ^a   Kumekawa, Norikazu ^a   Tsuruoka, Hisano ^a   Kotani, Hirokazu ^a  

^a KAZUSA DNA RESEARCH INSTITUTE   (Japan)

Author keywords

Arabidopsis thaliana; Centromere; Genome size

Indexed keywords

DNA; RIBOSOME DNA;

ARABIDOPSIS; ARTICLE; BACTERIAL ARTIFICIAL CHROMOSOME; CENTROMERE; CHROMOSOME 1; CHROMOSOME 2; CHROMOSOME 3; CHROMOSOME MAP; DNA FLANKING REGION; GENOME SIZE; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT; POLYMERASE CHAIN REACTION; PROTOPLAST; SOUTHERN BLOTTING; YEAST ARTIFICIAL CHROMOSOME;

ARABIDOPSIS; CENTROMERE; GENOME, PLANT; MOLECULAR SEQUENCE DATA; PHYSICAL CHROMOSOME MAPPING; SEQUENCE ANALYSIS, DNA;

ARABIDOPSIS; ARABIDOPSIS THALIANA; BACTERIA (MICROORGANISMS); EMBRYOPHYTA;

EID: 0036927583     PISSN: 13402838     EISSN: None     Source Type: Journal    
DOI: 10.1093/dnares/9.4.117     Document Type: Article

References (12)

1. The Arabidopsis Genome Initiative. 2000, Analysis of the genome sequence of the flowering plant Arabidopsis thaliana, Nature, 408, 796-815.
2. Copenhaver, G. P., Nickle, K., Kuromori, T. et al. 1999, Genetic definition and sequence analysis of Arabidopsis centromeres, Science, 286, 2468-2474.
3. Kumekawa, N., Hosouchi, T., Tsuruoka, H., and Kotani, H. 2001, The size and sequence organization of the centromeric region of Arabidopsis thaliana chromosome 4, DNA Res., 8, 285-290.
4. Kumekawa, N., Hosouchi, T., Tsuruoka, H., and Kotani, H. 2000, The size and sequence organization of the centromeric region of Arabidopsis thaliana chromosome 5, DNA Res., 7, 315-321.
5. Kakutani, T., Munakata, K., Richards, E. J., and Hirochika, H. 1999, Meiotically and mitotically stable inheritance of DNA hypomethylation induced by ddm1 mutation of Arabidopsis thaliana, Genetics, 151, 831-838.
6. Creusot, F., Fouilloux, E., Dron, M. et al. 1995, The CIC library: A large insert YAC library for genome mapping in Arabidopsis thaliana, Plant J., 8, 763-770.
7. Mozo, T., Dewar, K., Dunn, P. et al. 1999, A complete BAC-based physical map of the Arabidopsis thaliana, Nature Genet., 22, 271-275.
8. Marra, M., Kucaba, T., Sekhon, M. et al. 1999, A map for sequence analysis of the Arabidopsis thaliana, Nature Genet., 22, 265-270.
9. Kotani, H., Sato, S., Fukami, M. et al. 1997, A fine physical map of Arabidopsis thaliana chromosome 5: Construction of sequence ready contig map, DNA Res., 4, 371-384.
10. Devereux, J., Haeberli, P., and Smithies, O. 1984, A comprehensive set of sequence analysis programs for the VAX, Nucl. Acids Res., 12, 387-395.
11. Burge, D. and Karlin, S. 1997, Prediction of complete gene structures in human genomic DNA, J. Mol. Bio., 268, 78-94.
12. Copenhaver, G. C. and Pikaard, C. S. 1998. Two-dimensional RFLP analyses reveal megabases-sized clusters of rRNA gene variants in Arabidopsis thaliana, suggesting local spreading of variants as the mode for gene homogenization during concerted evolution, Plant J., 9, 273-282.