The size and sequence organization of the centromeric region of arabidopsis thaliana chromosome 4

DNA Research

Volumn 8, Issue 6, 2001, Pages 285-290

  Kumekawa, Norikazu ^a   Hosouchi, Tsutomu ^a   Tsuruoka, Hisano ^a   Kotani, Hirokazu ^a  

^a KAZUSA DNA RESEARCH INSTITUTE   (Japan)

Author keywords

Arabidopsis thaliana; Centromere; Physical map

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA;

PLANT DNA;

ARABIDOPSIS; ARTICLE; BIOLOGICAL MODEL; CENTROMERE; CHROMOSOME; CHROMOSOME MAP; DNA SEQUENCE; GENETICS; GENOME; MOLECULAR CLONING; MOLECULAR GENETICS; SOUTHERN BLOTTING;

ARABIDOPSIS; BLOTTING, SOUTHERN; CENTROMERE; CHROMOSOME MAPPING; CHROMOSOMES; CLONING, MOLECULAR; DNA, PLANT; GENOME, PLANT; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; PHYSICAL CHROMOSOME MAPPING; SEQUENCE ANALYSIS, DNA;

EID: 0035981207     PISSN: 13402838     EISSN: None     Source Type: Journal    
DOI: 10.1093/dnares/8.6.285     Document Type: Article

References (16)

1. The Arabidopsis Genome Initiative. 2000, Analysis of the genome sequence of the flowering plant Arabidopsis thaliana, Nature, 408, 796-815.
2. Kumekawa, N., Hosouchi, T., Tsuruoka, H., and Kotani, H. 2000, The size and sequence organization of the centromeric region of Arabidopsis thaliana chromosome 5, DNA Res., 7, 315-321.
3. Fleig, U., Beinhauer, J. D., and Hegemann, J. H. 1995, Functional selection for the centromere DNA from yeast chromosome VIII, Nucl. Acids Res., 23, 922-924.
4. Copenhaver, G. P., Nickle, K., Kuromori, T. et al. 1999, Genetic definition and sequence analysis of Arabidopsis centromeres, Science, 286, 2468-2474.
5. Copenhaver, G. C. and Pikaard, C. S. 1998, Two dimensional RFLP analyses reveal megabases-sized clusters of rRNA gene variants in Arabidopsis thaliana, suggesting local spreading of variants as the mode for gene homogenization during concerted evolution, Plant J., 9, 273-282.
6. Franzs, P. F., Armstrong, S., Hans de Jong, J. et al. 2000, Integrated cytogenetic map of chromosome arm 4S of A. thaliana: Structural organization of heterochroinatin knob and centromere region, Cell, 100, 367-376.
7. Kakutani, T., Munakata, K., Richards, E. J., and Hirochika, H. 1999, Meiotically and mitotically stable inheritance of DNA hypomethylation induced by ddm1 mutation of Arabidopsis thaliana, Genetics, 151, 831-838.
8. Creusot, F., Fouilloux, E., Dron, M. et al. 1995, The CIC library: A large insert YAC library for genome mapping in Arabidopsis thaliana, Plant J., 8, 763-770.
9. Mozo, T., Dewar, K., Dunn, P. et al. 1999, A complete BAC-based physical map of the Arabidopsis thaliana, Nature Genet, 22, 271-275.
10. Marra, M., Kucaba, T., Sekhon, M. et al. 1999, A map for sequence analysis of the Arabidopsis thaliana, Nature Genet., 22, 265-270.
11. Kotani, H., Sato, S., Fukami, M. et al. 1997, A fine physical map of Arabidopsis thaliana chromosome 5: Construction of sequence ready contig map. DNA Res., 4, 371-384.
12. Devereux, J., Haeberli, P., and Smithies, O. 1984, A comprehensive set of sequence analysis programs for the VAX, Nucl. Acids Res., 12, 387-395.
13. Burge, D. and Karlin, S. 1997, Prediction of complete gene structures in human genomic DNA, J. Mol. Bio., 268, 78-94.
14. Kunz, R., Saedler, H., and Lonnig, W. E. 1997, Plant transposable elements, Advance in Botanical Research., Academic Press. NY. 27, 331-470.
15. Kumar, A. and Bennetzen, J. F. 1999, Plant retrotransposons, Annu. Rev. Genet., 33, 479-532.
16. Simoens, C. R., Gielen, J., Van Montagu, M., and Inze, D. 1988, Characterization of highly repetitive sequences of Arabidopsis thaliana, Nucl. Acids Res., 16, 6753-6766.