Effect of sulfate and nitrate on acetate conversion by anaerobic microorganisms in a freshwater sediment

FEMS Microbiology Ecology

Volumn 42, Issue 3, 2002, Pages 375-385

  Scholten, Johannes C M ^a,d   Van Bodegom, Peter M ^b   Vogelaar, Jaap ^a   Van Ittersum, Alexander ^a   Hordijk, Kees ^c   Roelofsen, Wim ^a   Stams, Alfons J M ^a  

^a WAGENINGEN UNIVERSITY   (Netherlands)

^b VU UNIVERSITY AMSTERDAM   (Netherlands)

^c NETHERLANDS INSTITUTE OF ECOLOGY NIOO KNAW   (Netherlands)

^d UNIVERSITY OF WARWICK   (United Kingdom)

Author keywords

Competition; Denitrification; Inhibition; Methanogenesis; Most probable number enumeration; Sulfate reduction

Indexed keywords

ACETIC ACID; FRESH WATER; NITRATE; SULFATE;

ACETATE; FRESHWATER SEDIMENT; METHANOGENESIS; NITRATE; SULFATE-REDUCING BACTERIUM;

ANAEROBIC BACTERIUM; ARTICLE; DENITRIFICATION; FRESHWATER ENVIRONMENT; METHANOGENESIS; NONHUMAN; PRIORITY JOURNAL; SEDIMENT;

NETHERLANDS;

EID: 0036889704     PISSN: 01686496     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0168-6496(02)00359-8     Document Type: Article

References (53)

1. Schütz H., Seiler W., Conrad R. Processes involved in formation and emission of methane in rice paddies. Biogeochemistry. 7:1989;33-53.
2. Keine, R.P. (1991) Production and consumption of methane in aquatic systems. In: Microbial Production and Consumption of Greenhouse Gases: Methane, Nitrogen Oxides, and Halomethanes (Rogers, J.E. and Whitman, W.B., Eds.), pp. 111-146. American Society for Microbiology, Washington, DC.
3. Rothfuss F., Conrad R. Thermodynamics of methanogenic intermediary metabolism in littoral sediment of Lake Constance. FEMS Microbiol. Ecol. 12:1993;265-276.
4. Scholten J.C.M., Conrad R., Stams A.J.M. Effect of 2-bromo-ethane sulfonate, molybdate and chloroform on acetate consumption by methanogenic and sulfate-reducing populations in freshwater sediment. FEMS Microbiol. Ecol. 32:2000;35-42.
5. s values for hydrogen of methanogenic bacteria and sulfate reducing bacteria; an explanation for the apparent inhibition of methanogenesis by sulfate. Arch. Microbiol. 131:1982;278-282.
6. Lovley D.R., Dwyer D.F., Klug M.J. Kinetic analysis of competition between sulfate reducers and methanogens for hydrogen in sediments. Appl. Environ. Microbiol. 43:1982;1373-1379.
7. Lupton F.S., Zeikus J.G. Physiological basis for sulfate-dependent hydrogen competition between sulfidogens and methanogens. Curr. Microbiol. 11:1984;7-12.
8. 2 under resting and growing conditions. Arch. Microbiol. 137:1984;26-32.
9. Schönheit P., Kristjansson J.K., Thauer R.K. Kinetic mechanism for the ability of sulfate reducers to out-compete methanogens for acetate. Arch. Microbiol. 132:1982;285-288.
10. Lay J.-J., Miyahara T., Noike T. Methane release rate and methanogenic bacterial populations in lake sediments. Water Res. 30:1996;901-908.
11. Oude Elferink S.J.W.H., Visser A., Hulshoff Pol L.W., Stams A.J.M. Sulfate reduction in methanogenic bioreactors. FEMS Microbiol. Rev. 15:1994;119-136.
12. Oude Elferink S.J.W.H., Luppens S.B.I., Marcelis C.L.M., Stams A.J.M. Kinetics of acetate oxidation by two sulfate reducers isolated from anaerobic granular sludge. Appl. Environ. Microbiol. 64:1998;2301-2303.
13. Balderston W.L., Payne W.J. Inhibition of methanogenesis in salt marsh sediments and whole-cell suspensions of methanogenic bacteria by nitrogen oxides. Appl. Environ. Microbiol. 32:1976;264-269.
14. Westermann P., Ahring B.K. Dynamics of methane production, sulfate reduction, and denitrification in a permanently waterlogged alder swamp. Appl. Environ. Microbiol. 53:1987;2554-2559.
15. Belay N., Jung K-Y., Rajagopal B.S., Kremer J.D., Daniels L. Nitrate as sole nitrogen source for Methanococcus thermolithotrophicus and its effect on growth of several methanogenic bacteria. Curr. Microbiol. 21:1990;193-198.
16. 2O on methanogenesis and other redox processes in anoxic rice field soil. FEMS Microbiol. Ecol. 25:1998;301-318.
17. Clarens M., Bernet N., Delgenes J.-P., Moletta R. Effects of nitrogen oxides and denitrification by Pseudomonas stutzeri on acetotrophic methanogenesis by Methanosarcina mazei. FEMS Microbiol. Ecol. 25:1998;271-276.
18. 2O on methanogenesis by Methanosarcina barkeri and Methanobacterium bryantii. FEMS Microbiol. Ecol. 25:1998;331-339.
19. Roy R., Conrad R. Effect of methanogenic precursors (acetate, hydrogen, propionate) on the suppression of methane production by nitrate in anoxic rice field soil. FEMS Microbiol. Ecol. 28:1999;49-61.
20. Borger, G.J. (1992) Draining-digging-dredging; the creation of a new landscape in the peat areas of the countries. In: Fens and Bogs in The Netherlands; Vegetation, History, Nutrient Dynamics and Conservation. Geobotany 18 (Verhoeven, J.T.A., Ed.), pp. 132-171. Kluwer Academic Publishers, Dordrecht.
21. Van de Ven, G.P. (1993) Man-made Lowlands; History of Water Management and Land Reclamation in The Netherlands. Matrijs, Utrecht.
22. Van Marwijk, A.J.M.J. (1994) The water quality of five hydrobiological precious sites around Woerden. Final Rapport for Groot-Waterschap of Woerden, Leiden, The Netherlands.
23. Scholten J.C.M., Stams A.J.M. The effect of sulfate and nitrate on methane formation in a freshwater sediment. Antonie van Leeuwenhoek. 68:1995;309-315.
24. Huser B.A., Wuhrmann K., Zehnder A.J.B. Methanothrix soehngenii gen. nov. sp. nov., a new acetotrophic non-hydrogen-oxidizing methane bacterium. Arch. Microbiol. 132:1982;1-9.
25. Wolin E.A., Wolin M.J., Wolfe R.S. Formation of methane by bacterial extracts. J. Biol. Chem. 238:1963;2882-2886.
26. Stams A.J.M., van Dijk J.B., Dijkema C., Plugge C.M. Growth of syntrophic propionate-oxidizing bacteria with fumarate in the absence of methanogenic bacteria. Appl. Environ. Microbiol. 59:1993;1114-1119.
27. Hurley M.A., Roscoe M.E. Automated statistical analysis of microbial enumeration by dilution series. J. Appl. Bacteriol. 55:1983;159-164.
28. Scholten J.C.M., Stams A.J.M. Isolation and characterization of acetate-utilizing anaerobes from a freshwater sediment. Microb. Ecol. 40:2000;292-299.
29. m and the rate of endogenous substrate production (R) from progress curve data. Microb. Ecol. 10:1984;165-178.
30. Seitz H.-J., Schink B., Pfennig N., Conrad R. Energetics of syntrophic ethanol oxidation in defined chemostat cocultures 2. Energy sharing in biomass production. Arch. Microbiol. 155:1990;89-93.
31. Scholten, J.C.M. (1994) De invloed van nitraat en sulfaat op de methaanvorming in sedimenten. In: Optimaal Ontwerpen van Proeven bij Enige AIO-Projecten (Rasch, D. and Vervuurt, A., Eds.), pp. 51-80. Department of Mathematics, Wageningen University, Wageningen (in Dutch).
32. De Graaf W., Wellsbury P., Parkes R.J., Cappenberg T.E. Comparison of acetate turnover in methanogenic and sulfate-reducing sediments by radiolabeling and stable isotope labeling and by use of specific inhibitors: evidence for isotopic exchange. Appl. Environ. Microbiol. 62:1996;772-777.
33. 4 production in a rice paddy soil: model and experimental validation. Geochim. Cosmochim. Acta. 65:2001;2055-2066.
34. Segers R., Kengen S.W.M. Methane production as a function of anaerobic carbon mineralization - a process model. Soil Biol. Biochem. 30:1998;1107-1117.
35. Van Bodegom P.M., Stams A.J.M. Influence of alternative electron acceptors on methanogenesis in rice soils. Chemosphere. 39:1999;167-182.
36. Trüper H.G., Schlegel H.G. Sulphur metabolism in Thiorhodaceae 1. Quantitative measurements on growing cells of Chromatium okenii. Antonie van Leeuwenhoek. 30:1964;225-238.
37. Houwen F.P., Dijkema C., Schoenmakers C.H.H., Stams A.J.M., Zehnder A.J.B. 13C-NMR study of propionate degradation by a methanogenic coculture. FEMS Microbiol. Lett. 41:1987;269-274.
38. Scholten, J.C.M. (1999) The Influence of Sulfate and Nitrate on the Methane Formation by Methanogenic Archaea in Freshwater Sediments. PhD thesis, Wageningen University, Wageningen.
39. Sweerts J.-P.R.A., de Beer D., Nielsen L.P., Verdouw H., van den Heuvel J.C., Cohen Y., Cappenberg T.E. Denitrification by sulphur oxidizing Beggiatoa spp. mats on freshwater sediments. Nature. 344:1990;762-763.
40. De Mars H., Garritsen A.C. Interrelationship between water quality and groundwater flow dynamics in a small wetland system along a sandy hill ridge. Hydrol. Process. 11:1997;335-351.
41. Asawaka S., Akagawa-Matsushita M., Koga Y., Hayano K. Communities of methanogenic bacteria in paddy field soils with long-term application of organic matter. Soil Biol. Biochem. 30:1998;299-303.
42. Wind T., Stubner S., Conrad R. Sulfate-reducing bacteria in rice field soil and on rice roots. Syst. Appl. Microbiol. 22:1999;269-279.
43. Lay J-J., Miyahara T., Noike T. Methane release rate and methanogenic bacterial populations in lake sediments. Water Res. 30:1996;901-908.
44. Jones W., Paynter M.J.B. populations of methane-producing bacteria and in vitro methanogenesis in salt marsh and estuarine sediments. Appl. Environ. Microbiol. 39:1980;864-871.
45. Bak F., Pfennig N. Sulfate reducing bacteria in littoral sediment of Lake Constance. FEMS Microbiol. Ecol. 85:1991;43-52.
46. Both G.J., Laanbroek H.J. The effect of the incubation period on the result of MPN enumerations of nitrite-oxidizing bacteria: theoretical considerations. FEMS Microbiol. Ecol. 85:1991;335-344.
47. Sublette K.L., Silvester N.P. Oxidation of hydrogen sulfide by mixed cultures of Thiobacillus denitrificans and heterotrophs. Biotechnol. Bioeng. 29:1987;759-761.
48. Golterman H.L. Influence of FeS on denitrification in shallow waters. Verh. Int. Ver. Limnol. 24:1989;3025-3029.
49. Garcia-Gil L.J., Golterman H.L. Kinetics of FeS-mediated denitrification in sediments from the Camargue (Rhone delta, Southern France). FEMS Microbiol. Ecol. 13:1993;85-91.
50. Koster I.W., Rinzema A., de Vegt A.L., Lettinga G. Sulfide inhibition of the methanogenic activity of granular sludge at different pH levels. Water Res. 12:1986;1561-1567.
51. Visser A., Hulshoff Pol W.H., Lettinga G. Competition of methanogenic and sulfidogenic bacteria. Water Sci. Technol. 33:1996;99-110.
52. Brunet R.C., Garcia-Gil L.J. Sulfide-induced dissimilatory nitrate reduction to ammonia in anaerobic freshwater sediments. FEMS Microbiol. Ecol. 21:1996;131-138.
53. Sorensen J., Tiedje J.M., Firestone R.B. Inhibition of sulfide of nitric and nitrous oxide reduction by denitrifying Pseudomonas fluorescens. Appl. Environ. Microbiol. 39:1980;105-108.