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Volumn 22, Issue 2, 1999, Pages 269-279

Sulfate-reducing bacteria in rice field soil and on rice roots

Author keywords

16S rDNA; Desulfobotulus; Desulfobulbus; Desulforhabdus; Desulfotomaculum; Desulfovibrio; Isolation; MPN; Phylogenetic analysis; Rhizosphere; Rice roots; Sulfate reducing bacteria

Indexed keywords

SULFATE;

EID: 0033030412     PISSN: 07232020     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0723-2020(99)80074-5     Document Type: Article
Times cited : (67)

References (50)
  • 1
    • 84989732179 scopus 로고
    • Radial oxygen losses from intact rice roots as affected by the distance from the apex, respiration and waterlogging
    • ARMSTRONG, W.: Radial oxygen losses from intact rice roots as affected by the distance from the apex, respiration and waterlogging. Physiol. Plant. 25, 192-197 (1971)
    • (1971) Physiol. Plant. , vol.25 , pp. 192-197
    • Armstrong, W.1
  • 3
    • 0025925582 scopus 로고
    • Microbial sulfate reduction in littoral sediment of Lake Constance
    • BAK, E, PFENNIG, N.: Microbial sulfate reduction in littoral sediment of Lake Constance. FEMS Microbiol. Ecol. 85, 31-42 (1991)
    • (1991) FEMS Microbiol. Ecol. , vol.85 , pp. 31-42
    • Bak, E.1    Pfennig, N.2
  • 4
    • 0025925592 scopus 로고
    • A rapid and sensitive ion Chromatographic technique for the determination of sulfate reduction rates in freshwater lake sediments
    • BAK, F., SCHEFF, G., JANSEN, K.-H.: A rapid and sensitive ion Chromatographic technique for the determination of sulfate reduction rates in freshwater lake sediments. FEMS Microbiol. Ecol. 85, 23-30 (1991)
    • (1991) FEMS Microbiol. Ecol. , vol.85 , pp. 23-30
    • Bak, F.1    Scheff, G.2    Jansen, K.-H.3
  • 6
    • 0029886455 scopus 로고    scopus 로고
    • Isolation and characterization of a novel toluene-degrading, sulfate-reducing bacterium
    • BELLER, H. R., SPORMANN, A. M., SHARMA, P. K., COLE, J. R., REINHARD, M.: Isolation and characterization of a novel toluene-degrading, sulfate-reducing bacterium. Appl. Environm. Microbiol. 62, 1188-1196 (1996)
    • (1996) Appl. Environm. Microbiol. , vol.62 , pp. 1188-1196
    • Beller, H.R.1    Spormann, A.M.2    Sharma, P.K.3    Cole, J.R.4    Reinhard, M.5
  • 7
    • 0000221365 scopus 로고    scopus 로고
    • Sulphate reduction with roots and rhizomes of the marine macrophyte Zostera marina
    • BLAABJERG, V., FINSTER, K.: Sulphate reduction with roots and rhizomes of the marine macrophyte Zostera marina. Aquat. Microb. Ecol. 15, 311-314 (1998)
    • (1998) Aquat. Microb. Ecol. , vol.15 , pp. 311-314
    • Blaabjerg, V.1    Finster, K.2
  • 8
    • 1842362290 scopus 로고
    • Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli
    • BROSIUS, J., PALMER, M. L., KENNEDY, P. J., NOLLER, H. R.: Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli. Proc. Natl. Acad. Sci. 75, 4801-4805 (1978)
    • (1978) Proc. Natl. Acad. Sci. , vol.75 , pp. 4801-4805
    • Brosius, J.1    Palmer, M.L.2    Kennedy, P.J.3    Noller, H.R.4
  • 9
    • 0025774452 scopus 로고
    • Aerobic sulfate reduction in microbial mats
    • CANFIELD, D. E., DES MARAIS, D. J.: Aerobic sulfate reduction in microbial mats. Science 251, 1471-1473 (1991)
    • (1991) Science , vol.251 , pp. 1471-1473
    • Canfield, D.E.1    Des Marais, D.J.2
  • 10
    • 0031873023 scopus 로고    scopus 로고
    • Methanogenic degradation of polysaccharides and the characterization of polysaccharolytic Clostridia from anoxic rice field soil
    • CHIN, K.-C., RAINEY, F. A., JANSSEN, P. H., CONRAD, R.: Methanogenic degradation of polysaccharides and the characterization of polysaccharolytic Clostridia from anoxic rice field soil. Syst. Appl. Microbiol. 21, 185-200 (1998)
    • (1998) Syst. Appl. Microbiol. , vol.21 , pp. 185-200
    • Chin, K.-C.1    Rainey, F.A.2    Janssen, P.H.3    Conrad, R.4
  • 11
    • 84944816274 scopus 로고
    • Spectrophotometric determination of hydrogen sulfide in natural waters
    • CLINE, J. D.: Spectrophotometric determination of hydrogen sulfide in natural waters. Limnol. Oceanogr. 14, 454-458 (1969)
    • (1969) Limnol. Oceanogr. , vol.14 , pp. 454-458
    • Cline, J.D.1
  • 12
    • 76549256965 scopus 로고
    • Estimation of bacterial densities by means of the "most probable number"
    • COCHRAN, W. G.: Estimation of bacterial densities by means of the "most probable number". Biometrics 6, 105-116 (1950)
    • (1950) Biometrics , vol.6 , pp. 105-116
    • Cochran, W.G.1
  • 13
    • 0021836170 scopus 로고
    • A quick method for the determination of dissolved and precipitated sulfides in cultures of sulfate-reducing bacteria
    • CORD-RUWISCH, R.: A quick method for the determination of dissolved and precipitated sulfides in cultures of sulfate-reducing bacteria. Journal of Microbial Methods 4, 33-36 (1985)
    • (1985) Journal of Microbial Methods , vol.4 , pp. 33-36
    • Cord-Ruwisch, R.1
  • 16
    • 0029125546 scopus 로고
    • Desulforhabdus amnigenus gen. nov. sp. nov., a sulfate reducer isolated from anaerobic granular sludge
    • ELFERINK, S. J. W. H. O., MAAS, R. N., HARMSEN, H. J. M., STAMS, A. J. M.: Desulforhabdus amnigenus gen. nov. sp. nov., a sulfate reducer isolated from anaerobic granular sludge. Arch. Microbiol. 164, 119-124 (1995)
    • (1995) Arch. Microbiol. , vol.164 , pp. 119-124
    • Elferink, S.J.W.H.O.1    Maas, R.N.2    Harmsen, H.J.M.3    Stams, A.J.M.4
  • 17
    • 0000073756 scopus 로고
    • The significance of the biological sulfur cycle in rice production
    • Y. R. DOMMERGUES, and H. G. DIEM, eds, The Hague/ Boston/London
    • FRENEY, J. R., JACQ, V. A., BALDENSPERGER, J. F: The significance of the biological sulfur cycle in rice production. In: Microbiology of Tropical Soils and Plant Productivity (Y. R. DOMMERGUES, and H. G. DIEM, eds), pp. 271-317, The Hague/ Boston/London, (1982)
    • (1982) Microbiology of Tropical Soils and Plant Productivity , pp. 271-317
    • Freney, J.R.1    Jacq, V.A.2    Baldensperger, J.F.3
  • 18
    • 0025198891 scopus 로고
    • Survival of sulfate-reducing bacteria in oxic surface sediment of a seawater lake
    • FUKUI, M., TAKII, S.: Survival of sulfate-reducing bacteria in oxic surface sediment of a seawater lake. FEMS Microbiol. Ecol. 73, 317-322 (1990)
    • (1990) FEMS Microbiol. Ecol. , vol.73 , pp. 317-322
    • Fukui, M.1    Takii, S.2
  • 19
    • 0028977494 scopus 로고
    • Sulphate reduction in the hypolimnion and sediments of Lake Kinneret, Israel
    • HADAS, O., PINKAS, R.: Sulphate reduction in the hypolimnion and sediments of Lake Kinneret, Israel. Fresh. Biol. 33, 63-72 (1995)
    • (1995) Fresh. Biol. , vol.33 , pp. 63-72
    • Hadas, O.1    Pinkas, R.2
  • 20
    • 0344918715 scopus 로고
    • La sulfato-réduction en relation avec l'excrétion racinaire
    • Soc. Bot. Fr.
    • JACQ, V. A.: La sulfato-réduction en relation avec l'excrétion racinaire. Soc. Bot. Fr., Coll. Rhizosphère, 169-181 (1975)
    • (1975) Coll. Rhizosphère , pp. 169-181
    • Jacq, V.A.1
  • 21
    • 0029813330 scopus 로고    scopus 로고
    • Disproportionation of inorganic sulfur compounds by the sulfate-reducing bacterium Desulfocapsa thiozymogenes gen. nov., sp. nov.
    • JANSSEN, P. H., SCHUHMANN, A., BAK, F., LIESACK, W.: Disproportionation of inorganic sulfur compounds by the sulfate-reducing bacterium Desulfocapsa thiozymogenes gen. nov., sp. nov., Arch. Microbiol. 166, 184-192 (1996)
    • (1996) Arch. Microbiol. , vol.166 , pp. 184-192
    • Janssen, P.H.1    Schuhmann, A.2    Bak, F.3    Liesack, W.4
  • 22
    • 0028981813 scopus 로고
    • The preferred electron acceptor of Desulfovibrio desulfuricans CSN
    • KREKELER, D., CYPIONKA, H.: The preferred electron acceptor of Desulfovibrio desulfuricans CSN. FEMS Microbiol. Ecol. 17(4), 271-277 (1995)
    • (1995) FEMS Microbiol. Ecol. , vol.17 , Issue.4 , pp. 271-277
    • Krekeler, D.1    Cypionka, H.2
  • 23
    • 0024526211 scopus 로고
    • Methane production, sulfate reduction and competition for substrates in the sediments of Lake Washington
    • KUIVILA, K. M., MURRAY, J. W., DEVOL, A. H.: Methane production, sulfate reduction and competition for substrates in the sediments of Lake Washington. Geochim. Cosmochim. Acta 53, 409-416 (1989)
    • (1989) Geochim. Cosmochim. Acta , vol.53 , pp. 409-416
    • Kuivila, K.M.1    Murray, J.W.2    Devol, A.H.3
  • 24
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • STACKEBRANDT, E., GOODFELLOW, M. eds, John Wiley and Sons, Chichester, England
    • LANE, D. J.: 16S/23S rRNA sequencing. In: Nucleic acid techniques in bacterial systematics (STACKEBRANDT, E., GOODFELLOW, M. eds), John Wiley and Sons, Chichester, England, pp 205-248 (1991).
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 205-248
    • Lane, D.J.1
  • 26
    • 0027079306 scopus 로고
    • Sulfur cycling in rice wetlands
    • R. W. Howarth, J. W. B. Stewart, and M. V. Ivanov, eds, John Wiley & Sons
    • LEFROY, R. D. B., MAMARIL, C. P., BLAIR, G. J., GONZALES, P. J.: Sulfur cycling in rice wetlands, in: Sulfur Cycling on the Continents (R. W. Howarth, J. W. B. Stewart, and M. V. Ivanov, eds), Vol. 11, pp. 279-300, John Wiley & Sons (1992)
    • (1992) Sulfur Cycling on the Continents , vol.11 , pp. 279-300
    • Lefroy, R.D.B.1    Mamaril, C.P.2    Blair, G.J.3    Gonzales, P.J.4
  • 27
    • 0016753240 scopus 로고
    • A more reliable Gram staining technique for diagnosis of surgial infections
    • MAGEE, C. M., RODEHEAVER, G., EGERTON, M. T., EDLICH, R. F.: A more reliable Gram staining technique for diagnosis of surgial infections . Amer.J. Surgery 130, 341-346 (1975)
    • (1975) Amer.J. Surgery , vol.130 , pp. 341-346
    • Magee, C.M.1    Rodeheaver, G.2    Egerton, M.T.3    Edlich, R.F.4
  • 28
    • 0024325620 scopus 로고
    • Measurement of desoxyguanosine/thymidine ratios in complex mixtures by high-perfor-mance liquid chromatography for determination of the mole percentage guanine + cytosine of DNA
    • MESBAH, C. M., WITHMAN, W: Measurement of desoxyguanosine/thymidine ratios in complex mixtures by high-perfor-mance liquid chromatography for determination of the mole percentage guanine + cytosine of DNA. J. Chromatogr. 479, 297-306 (1989)
    • (1989) J. Chromatogr. , vol.479 , pp. 297-306
    • Mesbah, C.M.1    Withman, W.2
  • 29
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of desoxyribonucleic acid by high performance liquid chromatography
    • MESBAH, C. M., PREMACHANDRAN, U., WITHMAN, W: Precise measurement of the G+C content of desoxyribonucleic acid by high performance liquid chromatography. J. Syst. Bacteriol. 39, 159-167 (1989)
    • (1989) J. Syst. Bacteriol. , vol.39 , pp. 159-167
    • Mesbah, C.M.1    Premachandran, U.2    Withman, W.3
  • 30
    • 0026616145 scopus 로고
    • Characterization of sulfate-reducing bacteria isolated from Senegal ricefields
    • OUATTARA, A. S., JACQ, V. A.: Characterization of sulfate-reducing bacteria isolated from Senegal ricefields. FEMS Micro-biol. Ecol. 101, 217-228 (1992)
    • (1992) FEMS Micro-biol. Ecol. , vol.101 , pp. 217-228
    • Ouattara, A.S.1    Jacq, V.A.2
  • 31
    • 0002135088 scopus 로고
    • Natural sources of nutrients in rice soils
    • Laguna, The International Rice Research Institute-Los Banos
    • PATNAIK, S.: Natural sources of nutrients in rice soils. In: Soils and Rice, pp. 501-519, Laguna, The International Rice Research Institute-Los Banos 1978
    • (1978) Soils and Rice , pp. 501-519
    • Patnaik, S.1
  • 32
    • 0022471712 scopus 로고
    • An improved method of preparing wet mounts for photomicrographs of microorganisms
    • PFENNIG, N., WAGENER, S.: An improved method of preparing wet mounts for photomicrographs of microorganisms. J. Microbiol. Meth. 4, 303-306 (1986)
    • (1986) J. Microbiol. Meth. , vol.4 , pp. 303-306
    • Pfennig, N.1    Wagener, S.2
  • 33
    • 0002968910 scopus 로고
    • A study of the development of the root surface microflora during the initial stages of plant growth
    • ROVIRA, A. D.: A study of the development of the root surface microflora during the initial stages of plant growth. J. Appl. Bacteriol. 19(1), 72-79 (1956)
    • (1956) J. Appl. Bacteriol. , vol.19 , Issue.1 , pp. 72-79
    • Rovira, A.D.1
  • 34
    • 0030744956 scopus 로고    scopus 로고
    • Vertical distribution of sulfate-reducing bacteria at the oxic-anoxic interface in sediments of the oligotrophic lake stechlin
    • SASS, H., CYPIONKA, H., BABENZIEN, H.-D.: Vertical distribution of sulfate-reducing bacteria at the oxic-anoxic interface in sediments of the oligotrophic lake Stechlin. FEMS Microbiol. Ecol. 22, 245-255 (1997)
    • (1997) FEMS Microbiol. Ecol. , vol.22 , pp. 245-255
    • Sass, H.1    Cypionka, H.2    Babenzien, H.-D.3
  • 35
    • 0027038902 scopus 로고
    • Seasonal variation in sulfate reduction and methanogenesis in peaty sediments of eutrophic Lake Loosdrecht, The Netherlands
    • SINKE, A. J. C., CORNELESE, A. A., CAPPENBERC;, T. E., ZEHNDER, A. J. B.: Seasonal variation in sulfate reduction and methanogenesis in peaty sediments of eutrophic Lake Loosdrecht, The Netherlands. Biogeochem. 16,43-61 (1992)
    • (1992) Biogeochem. , vol.16 , pp. 43-61
    • Sinke, A.J.C.1    Cornelese, A.A.2    Cappenberc, T.E.3    Zehnder, A.J.B.4
  • 36
    • 0000612080 scopus 로고
    • Phenotypic characterization
    • P. Gerhardt, R. G. E. Merray, W. A. Wood, N. R. Krieg, eds, Washington, ASM
    • SMIBERT, R. M., KRIEG, N. R.: Phenotypic characterization. In: Methods for General and Molecular Bacteriology, pp. 607-654. (P. Gerhardt, R. G. E. Merray, W. A. Wood, N. R. Krieg, eds), Washington, ASM (1994)
    • (1994) Methods for General and Molecular Bacteriology , pp. 607-654
    • Smibert, R.M.1    Krieg, N.R.2
  • 37
    • 0030833456 scopus 로고    scopus 로고
    • Phylogenetic analysis of the genus Desulfotomaculum: Evidence for the missclassification of Desulfotomaculum guttoideum and description of Desulfotomaculum orientis as Desulfosporosinus orientis gen. nov., comb. nov.
    • STACKEBRANDT, E., SPROER, C., RAINEY, F. A., BURGHARDT, J., PAUKER, O., HIPPE, H.: Phylogenetic analysis of the genus Desulfotomaculum: Evidence for the missclassification of Desulfotomaculum guttoideum and description of Desulfotomaculum orientis as Desulfosporosinus orientis gen. nov., comb. nov. Intern. J. System. Bacteriol. 47, 1134-1139 (1997)
    • (1997) Intern. J. System. Bacteriol. , vol.47 , pp. 1134-1139
    • Stackebrandt, E.1    Sproer, C.2    Rainey, F.A.3    Burghardt, J.4    Pauker, O.5    Hippe, H.6
  • 39
    • 0032428054 scopus 로고    scopus 로고
    • Sulfur oxidation in rice field soil: Activity, enumeration, isolation and characterization of thiosulfate-oxidizing bacteria
    • STUBNER, S., WIND, T., CONRAD, R.: Sulfur oxidation in rice field soil: Activity, enumeration, isolation and characterization of thiosulfate-oxidizing bacteria. System. Appl. Microbiol. 21, 569-578 (1998)
    • (1998) System. Appl. Microbiol. , vol.21 , pp. 569-578
    • Stubner, S.1    Wind, T.2    Conrad, R.3
  • 42
    • 0026615613 scopus 로고
    • Rates of sulfate reduction and thiosulfate consumption in a marine microbial mat
    • VISSCHER, P. T., PRINS, R. A., VAN GEMERDEN, H.: Rates of sulfate reduction and thiosulfate consumption in a marine microbial mat. FEMS Microbiol. Ecol. 86, 283-294 (1992)
    • (1992) FEMS Microbiol. Ecol. , vol.86 , pp. 283-294
    • Visscher, P.T.1    Prins, R.A.2    Van Gemerden, H.3
  • 43
    • 0026067797 scopus 로고
    • 16S ribosomal DNA amplification for phylogenetic study
    • WEISBURG, W. G., BARNS, S. M., PELLETIER, A., LANE, D. J.: 16S ribosomal DNA amplification for phylogenetic study. J. Bacteriol. 173, 697-703 (1991).
    • (1991) J. Bacteriol. , vol.173 , pp. 697-703
    • Weisburg, W.G.1    Barns, S.M.2    Pelletier, A.3    Lane, D.J.4
  • 44
    • 0022170677 scopus 로고
    • Interactions between methanogenic and sulfate-reducing bacteria in sediments
    • WARD, D. M., WINFREY, M. R.: Interactions between methanogenic and sulfate-reducing bacteria in sediments. Adv. Aquat. Microbiol. 3, 141-179(1985)
    • (1985) Adv. Aquat. Microbiol. , vol.3 , pp. 141-179
    • Ward, D.M.1    Winfrey, M.R.2
  • 46
    • 0000974367 scopus 로고
    • Dissimilatory sulfate- or sulfur-reducing bacteria
    • N. R. Krieg, J. G. Hott, eds. Baltimore, MD, Williams and Wilkins
    • WIDDEL, F., PFENNIG, N.: Dissimilatory sulfate- or sulfur-reducing bacteria, p. 663-679 In: Bergey's Manual of Systematic Bacteriology (N. R. Krieg, J. G. Hott, eds.) Baltimore, MD, Williams and Wilkins, (1984)
    • (1984) Bergey's Manual of Systematic Bacteriology , pp. 663-679
    • Widdel, F.1    Pfennig, N.2
  • 47
    • 0002076521 scopus 로고
    • The genus Desulfuromonas and other Gram-negative sulfur-reducing eubacteria
    • nd edition, New York, Springer
    • nd edition, New York, Springer (1992)
    • (1992) The Procaryotes , pp. 3379-3389
    • Widdel, F.1    Pfennig, N.2
  • 48
    • 0002019238 scopus 로고
    • The genus desulfotomaculum
    • nd edition, New York, Springer
    • nd edition, New York, Springer (1992)
    • (1992) The Procaryotes , pp. 1792-1799
    • Widdel, F.1
  • 49
    • 0029416554 scopus 로고
    • Sulfur compounds, potential turnover of sulfate reduction and thiosulfate, and numbers of sulfate-reducing bacteria in planted and unplanted paddy soil
    • WIND, T., CONRAD, R.: Sulfur compounds, potential turnover of sulfate reduction and thiosulfate, and numbers of sulfate-reducing bacteria in planted and unplanted paddy soil. FEMS Microb. Ecol. 18, 257-266 (1995)
    • (1995) FEMS Microb. Ecol. , vol.18 , pp. 257-266
    • Wind, T.1    Conrad, R.2
  • 50
    • 0030613612 scopus 로고    scopus 로고
    • Localization of sulfate reduction in planted and unplanted rice field soil
    • WIND, T., CONRAD, R.: Localization of sulfate reduction in planted and unplanted rice field soil. Biogeochem. 37, 253-278 (1997)
    • (1997) Biogeochem. , vol.37 , pp. 253-278
    • Wind, T.1    Conrad, R.2


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