Interspecific mitochondrial DNA restriction fragment length polymorphisms in Aspergillus section Flavi

Mycologia

Volumn 94, Issue 6, 2002, Pages 1078-1086

  Quirk, Jeffrey T ^a   Kupinski, John M ^b  

^a EDINBORO UNIVERSITY OF PENNSYLVANIA   (United States)

^b ST BONAVENTURE UNIVERSITY   (United States)

Author keywords

Fungal identification; Haplotype; Taxonomy

Indexed keywords

FUNGUS; MITOCHONDRIAL DNA; TAXONOMY;

ASPERGILLUS; ASPERGILLUS AVENACEUS; ASPERGILLUS FLAVOFURCATIS; ASPERGILLUS FLAVUS; ASPERGILLUS LEPORIS; ASPERGILLUS NOMIUS; ASPERGILLUS ORYZAE; ASPERGILLUS PARASITICUS; ASPERGILLUS SOJAE; ASPERGILLUS SUBOLIVACEUS; ASPERGILLUS TAMARII; ASPERGILLUS ZONATUS; FUNGI; MYXOGASTRIA; NOMIUS;

EID: 0036864829     PISSN: 00275514     EISSN: None     Source Type: Journal    
DOI: 10.1080/15572536.2003.11833164     Document Type: Article

References (32)

1. Brown TA. 1990. Mitochondrial genome of Aspergillus nidulans. In: O'Brien SJ, ed. Genetic maps, locus maps of complex genomes: Book 3. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press. p 109-110.
2. Brown TA, Waring RB, Scazzocchio C, Davies RW. 1985. The Aspergillus nidulans mitochondrial genome. Curr Genet 9:113-117.
3. Bruns TD, White TJ, Taylor JW. 1991. Fungal molecular systematics. Annu Rev Ecol Syst 22:525-564.
4. Cesarone CF, Bolognesi C, Santi L. 1979. Improved microfluorometric DNA determination in biological material using 33258 Hoechst. Anal Biochem 100:100-107.
5. Chang PK, Bhatnagar D, Cleveland TE, Bennett JW. 1995. Sequence variability in homologs of the aflatoxin pathway gene aflR distinguishes species of Aspergillus section Flavi. Appl Environ Microbiol 61:40-43.
6. Christensen M. 1981. A synoptic key and evaluation of species in the Aspergillus flavus group. Mycologia 73:1056-1084.
7. Croft JH, Varga J. 1994. Applications of RFLPs in systematics and population genetics of Aspergilli. In: Powell KA, Renwick A, Peberdy JF, eds. The Genus Aspergillus: From Taxonomy and Genetics to Industrial Application. New York: Plenum Press. p 277-289.
8. Feibelman TP, Cotty PJ, Doster MA, Michailides TJ. 1998. A morphologically distinct strain of Aspergillus nomius. Mycologia 90:618-623.
9. Gams W, Christensen M, Onions AH, Pitt JI, Samson RA. 1985. Infrageneric taxa of Aspergillus. In: Samson RA, Pitt JI, eds. Advances in Penicillium and Aspergillus systematics. New York: Plenum Press. p 55-62.
10. Garber RC, Yoder OC. 1983. Isolation of DNA from filamentous fungi and separation into nuclear, mitochondrial, ribosomal, and plasmid components. Anal Biochem 135:416-422.
11. Geiser DM, Pitt JI, Taylor JW. 1998. Cryptic speciation and recombination in the aflatoxin-producing fungus Aspergillus flavus. Proc Natl Acad Sci USA 95:388-393.
12. Gomi K, Tanaka A, Iimura Y, Takahashi K. 1989. Rapid differentiation of four related species of koji molds by agarose gel electrophoresis of genomic DNA digested with SmaI restriction enzyme. J Gen Appl Microbiol 35: 225-232.
13. Horn BW. 1997. Aspergillus caelatus, a new species in section Flavi. Mycotaxon 61:185-191.
14. Keller NP, Cleveland TE, Bhatnagar D. 1992. Variable electrophoretic karyotypes of members of Aspergillus section Flavi. Curr Genet 21:371-375.
15. Klich MA, Mullaney EJ. 1987. DNA restriction enzyme fragment length polymorphism as a tool for differentiation of Aspergillus flavus and Aspergillus oryzae. Exp Mycol 11:170-175.
16. _, _, Daly CB. 1993. Analysis of intraspecific and interspecific variability of three common species in Aspergillus section Versicolores using DNA restriction fraginent length polymorphisms. Mycologia 85:852-855.
17. _, Pitt JI. 1988. Differentiation of Aspergillus flavus from A. parasiticus and other closely related species. Trans Br Mycol Soc 91:99-108.
18. Kozlowski M, Stepien PP. 1982. Restriction enzyme analysis of mitochondrial DNA of members of the genus Aspergillus as an aid in taxonomy. J Gen Microbiol 128:471-476.
19. Kurtzman CP, Smiley MJ, Robnett CJ, Wicklow DT. 1986. DNA relatedness among wild and domesticated species in the Aspergillus flavus group. Mycologia 78:955-959.
20. _, Horn BW, Hesseltine CW. 1987. Aspergillus nomius, a new aflatoxin-producing species related to Aspergillus flavus and Aspergillus tamarii. Antonie Van Leeuwenhoek 53:147-158.
21. McAlpin CE, Mannarelli B. 1995. Construction and characterization of a DNA probe for distinguishing strains of Aspergillus flavus. Appl Environ Microbiol 61:1068-1072.
22. Moody SF, Tyler BM. 1990a. Restriction enzyme analysis of mitochondrial DNA of the Aspergillus flavus group: A. flavus, A. parasiticus, and A. nomius. Appl Environ Microbiol 56:2441-2452.
23. _, _. 1990b. Use of nuclear DNA restriction fragment length polymorphisms to analyze the diversity of the Aspergillus flavus group: A. flavus, A. parasiticus and A. nomius. Appl Environ Microbiol 56:2453-2461.
24. Peterson SW. 1995. Phylogenetic analysis of Aspergillus sections Crèmei and Wentii, based on ribosomal DNA sequences. Mycol Res 99:1349-1355.
25. _. 2000. Phylogenetic relationships in Aspergillus based on rDNA sequence analysis. In: Samson RA, Pitt JI, eds. Integration of Modern Taxonomic Methods for Penicillium and Aspergillus Classification. Amsterdam: Harwood Academic Publishers. p 323-355.
26. _, Horn BW, Ito Y, Goto T. 2000. Genetic variation and aflatoxin production in A. tamarii and A. caelatus. In: Samson RA, Pitt JI, eds. Integration of Modern Taxonomic Methods for Penicillium and Aspergillius Classification. Amsterdam: Harwood Academic Publishers. p 447-458.
27. Raper KB, Fennell DI. 1965. The genus Aspergillus. Baltimore, Maryland: Williams and Wilkins. 686 p.
28. Samson RA. 1994. Taxonomy: Current concepts of Aspergillus systematics. In: Smith JE, ed. Aspergillus. New York: Plenum Press. p 1-22.
29. Stepien PP, Bernard U, Cooke HJ, Kuntzel H. 1978. Restriction endonuclease cleavage map of mitochondrial DNA from Aspergillus nidulans. Nucleic Acids Res 5: 317-330.
30. Taylor JW, Geiser DM, Burt A, Koufopanou V. 1999. The evolutionary biology and population genetics underlying fungal strain typing. Clin Microbiol Rev 12:126-146.
31. Varga J, Kevei F, Vriesema A, Debets F, Kozakiewicz Z, Croft JH. 1994. Mitochondrial DNA restriction fragment length polymorphisms in field isolates of the Aspergillus niger aggregate. Can J Microbiol 40:612-621.
32. Yuan GF, Liu CS, Chen CC. 1995. Differentiation of Aspergillus parasiticus from Aspergillus sojae by random amplification of polymorphic DNA. Appl Environ Microbiol 61:2384-2387.