Genomic and phylogenetic analyses of an adenovirus isolated from a corn snake (Elaphe guttata) imply a common origin with members of the proposed new genus Atadenovirus

Journal of General Virology

Volumn 83, Issue 10, 2002, Pages 2403-2410

  Farkas, Szilvia L ^a   Benko, Mária ^a   Élo, Péter ^a   Ursu, Krisztina ^a   Dán, Ádám ^a   Ahne, Winfried ^a   Harrach, Balázs ^a  

^a INSTITUTE OF EXPERIMENTAL MEDICINE   (Hungary)

Author keywords

[No Author keywords available]

Indexed keywords

CORE PROTEIN; CYTOSINE; GUANINE; PROTEINASE; STRUCTURAL PROTEIN; VIRUS DNA; VIRUS PROTEIN;

ADENOVIRUS; ARTICLE; ATADENOVIRUS; CONTROLLED STUDY; DNA BASE COMPOSITION; DNA SEQUENCE; DNA VIRUS; GENE CLUSTER; GENE SEQUENCE; GENETIC ANALYSIS; HYPOTHESIS; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; PROTEIN DEGRADATION; REPTILE; SEQUENCE HOMOLOGY; SNAKE; VIRUS GENOME; VIRUS ISOLATION;

ADENOVIRIDAE; ANIMALIA; ATADENOVIRUS; DNA VIRUSES; ELAPHE; ELAPHE GUTTATA; PANTHEROPHIS GUTTATUS; PROKARYOTA; REPTILIA; SERPENTES; ZEA MAYS;

EID: 0036788159     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/0022-1317-83-10-2403     Document Type: Article

References (58)

1. Altschul, S.F., Gish, W., Miller, W., Myers, E. W. & Lipman, D. J. (1990). Basic local alignment search tool. Journal of Molecular Biology 215, 403-410.
2. Anderson, C. W. (1990). The protemase polypeptide of adenovirus serotype 2 virions. Virology 177, 259-272.
3. Barbezange, C., Benko, M., Dán, Á. & Harrach, B. (2000). DNA sequencing and phylogenetic analysis of the protease gene of ovine adenovirus 3 suggest that adenoviruses of sheep belong to two different genera. Virus Research 66, 79-80.
4. Bartha, A. (1969). Proposal for subgrouping of bovine adenoviruses. Acta Veterinaria Academiae Scientiarum Hungaricae 19, 319-321.
5. Benko, M. & Harrach, B. (1998). A proposal for establishing a new (third) genus within the Adenoviridae family. Archives of Virology 143, 829-837.
6. Benko, M., Harrach, B. & Russell, W. C. (2000). Family Adenoviridae. In Virus Taxonomy. Seventh Report of the International Committee on Taxonomy of Viruses, pp. 227-238. Edited by M. H. V. van Regenmortel, C. M. Fauquet, D. H. L. Bishop, E. B. Carstens, M. K. Estes, S. M. Lemon, J. Maniloff, M. A. Mayo, D. J. McGeoch, C. R. Pringle & R. B. Wickner. San Diego: Academic Press.
7. Benko, M., Élo, P., Ursu, K., Ahne, W., LaPatra, S. E., Thomson, D. & Harrach, B. (2002). First molecular evidence for the existence of distinct fish and snake adenoviruses. Journal of Virology (in press).
8. Both, G. W. (2002). Afadenovirus. In The Springer Index of Viruses, pp. 2-8. Edited by C. A. Tidona & G. Darai. Berlin: Springer-Verlag.
9. Boyle, D. B., Pye, A. D., Kocherhans, R., Adair, B. M., Vrati, S. & Both, G. W. (1994). Characterization of Australian ovine adenovirus isolates. Veterinary Microbiology 41, 281-291.
10. Chiocca, S., Kurzbauer, R., Schaffner, G., Baker, A., Mautner, V. & Cotton, M. (1996). The complete DNA sequence and genomic organization of the avian adenovirus CELO. Journal of Virology 70, 2939-2949.
11. Clark, H. F., Michalski, F., Tweedell, K. S., Yohn, D. & Zeigel, R. F. (1973). An adenovirus, FAV-1, isolated from the kidney of a frog (Rana pipiens). Virology 51, 392-400.
12. Corpet, F. (1988). Multiple sequence alignment with hierarchical clustering. Nucleic Acids Research 16, 10881-10890.
13. Dán, Á., Ruzsics, Zs., Russell, W. C., Benko, M. & Harrach, B. (1998). Analysis of the hexon gene sequence of bovine adenovirus type 4 provides further suppprt for a new adenovirus genus (Atadenovirus). Journal of General Virology 79, 1453-1460.
14. Davison, A. J. & Harrach, B. (2002). Siadenovirus. In The Springer Index of Viruses, pp. 29-33. Edited by C. A. Tidona & G. Darai. New York: Springer-Verlag.
15. Davison, A. J., Telford, E. A., Watson, M. S., McBride, K. & Mautner, V. (1993). The DNA sequence of adenovirus type 40. Journal of Molecular Biology 234, 1308-1316.
16. Davison, A. J., Wright, K. M. & Harrach, B. (2000). DNA sequence of frog adenovirus. Journal of General Virology 81, 2431-2439.
17. Ding, J., McGrath, W. J., Sweet, R. M. & Mangel, W. F. (1996). Crystal structure of the human adenovirus protemase with its 11 amino acid cofactor. EMBO Journal 15, 1778-1783.
18. Dingwall, C. & Laskey, R. A. (199 1). Nuclear targeting sequences-a consensus? Trends in Biochemical Sciences 16, 478-481.
19. Essbauer, S. & Ahne, W. (2001). Viruses of lower vertebrates. Journal of Veterinary Medicine. B, Infectious Diseases and Veterinary Public Health 48, 403-475.
20. Felsenstein, J. (1989). PHYLIP-Phylogeny inference package. Cladistics 5, 164-166.
21. Frye, F. L., Munn, R. J., Gardner, M., Barten, S. L. & Hadfy, L. B. (1994). Adenovirus-like hepatitis in a group of related Rankin's dragon lizards (Pogona henrylawsoni). Journal of Zoo and Wildlife Medicine 25, 167-171.
22. Harrach, B. (2000). Reptile adenoviruses in cattle? Acta Veterinaria Hungarica 48, 484-490.
23. Harrach, B. & Benko, M. (1998). Phylogenetic analysis of adenovirus sequences; proof of the necessity of establishing a third genus in the Adenoviridae family. In Adenovirus Methods and Protocols 21, pp. 309-339. Edited by W. S. M. Wold. Totowa, NJ: Humana Press.
24. Harrach, B., Meehan, B. M., Benko, M., Adair, B. M. & Todd, D. (1997). Close phylogenelic relationship between egg drop syndrome virus, bovine adenovirus serotype 7, and ovine adenovirus strain 287. Virology 229, 302-308.
25. Hess, M., Blöcker, H. & Brandt, P. (1997). The complete nucleotide sequence of the egg drop syndrome virus: an intermediate between mastadenoviruses and aviadenoviruses. Virology 238, 145-156.
26. Jacobson, E. R. & Kollias, G. V. (1986). Adenovirus-like infection in a savannah monitor. Journal of Zoo Animal Medicine 17, 149-151.
27. Jacobson, E. R. & Gardiner, C. H. (1990). Adeno-like virus in esophageal and tracheal mucosa of a Jackson's chameleon (Chamaeleo jacksoni). Veterinary Pathology 27, 210-212.
28. Jacobson, E. R., Gardiner, C. H. & Foggin, C. M. (1984). Adenovirus-like infection in two Nile crocodiles. Journal of the American Veterinary Medical Association 185, 1421-1422.
29. Jacobson, E. R., Gaskin, J. M. & Gardiner, C. H. (1985). Adenovirus-like infection in a boa constrictor. Journal of the American Veterinary Medical Association 187, 1226-1227.
30. Jacobson, E. R., Kopit, W., Kennedy, F. A. & Funk, R. S. (1996). Coinfection of a bearded dragon (Pogona vilticeps) with adenovirus- and dependovirus-like viruses. Veterinary Pathology 33, 343-346.
31. Juhasz, A. & Ahne, W. (1992). Physico-chemical properties and cytopathogenicity of an adenovirus-like agent isolated from corn snake (Elaphe gutfafa). Archives of Virology 130, 429-439.
32. Khatri, A. & Both, G. W. (1998). Identification of transcripts and promoter regions of ovine adenovirus OAV287. Virology 245, 128-141.
33. Kinsel, M. J., Barbiers, R. B., Manharth, A. & Murnane, R. D. (1997). Small intestinal adeno-like virus in a mountain chameleon (Chameleo montium). Journal of Zoo and Wildlife Medicine 28, 498-500.
34. Lehmkuhl, H. D. & Cutlip, R. C. (1999). A new goat adenovirus isolate proposed as the prototype strain for goat adenovirus serotype 1. Archives of Virology 144, 1611-1618.
35. Lehmkuhl, H. D., Hobbs, L. A. & Woods, L. W. (2001). Characterization of a new adenovirus isolated from black-tailed deer in California. Archives of Virology 146, 1687-1196.
36. McFerran, J. B. & Smyth, J. A. (2000). Avian adenoviruses. Revue Scientifique et Technique Office International des Epizooties 19, 589-601.
37. Ogawa, M., Ahne, W. & Essbauer, S. (1992). Reptilian viruses: adenovirus-like agent isolated from royal python (Python regius). Journal of Veterinary Medicine. B, Infectious Diseases and Veterinary Public Health 39, 732-736.
38. Ojkic, D. & Nagy, É. (2000). The complete nucleolide sequence of fowl adenovirus type 8. Journal of General Virology 81, 1833-1837.
39. Page, R. D. M. (1996). TreeView: an application to display phylogenetic trees on personal computers. Computer Applications in the Biosciences 12, 357-358.
40. Perkins, L. E., Campagnoli, R. P., Harmon, B. G., Gregory, C. R., Steffens, W. L., Latimer, K., Clubb, S. & Crane, M. (2001). Detection and confirmation of reptilian adenovirus infection by in situ hybridization. Journal of Veterinary Diagnostic Investigations 13, 365-368.
41. Pierson, F. W. & Domermuth, C. H. (1997). Haemorrhagic enteritis, marble spleen disease, and related infections. In Diseases of Poultry, 10th edn, pp. 624-633. Edited by B. W. Calnek, H. J. Barnes, C. W. Beard, L. R. McDougald, & Y. M. Saif. Ames, IA: Iowa State University Press.
42. Pitcovski, J., Mualem, M., Rei-Koren, Z., Krispel, S., Shmueli, E., Peretz, Y., Gutter, B., Gallili, G. E., Michael, A. & Goldberg, D. (1998). The complete DNA sequence and genome organization of the avian adenovirus, haemorrhagic enIteribs virus. Virology 249, 307-315.
43. Ramis, A., Fernandez-Bellon, H., Majo, N., Martinez-Silvestre, A., Latimer, K., Campagnoli, R., Harmon, B. G., Gregory, C. R., Steffens, W. L., Clubb, S. & Crane, M. (2000). Adenovirus hepatitis in a boa constrictor (Boa constrictor). Journal of Veterinary Diagnostic Investigations 12, 573-576.
44. Rancourt, C., Keyvani-Amineh, H., Sircar, S., Labrecque, P. & Weber, J. M. (1995). Proline 137 is critical for adenovirus prolease encapsidation and activation but not enzyme activity. Virology 209, 167-173.
45. Russell, W. C. & Kemp, G. D. (1995). Role of adenovirus structural components in the regulation of adenovirus infection. Current Topics in Microbiology and Immunology 199, 81-98.
46. Russell, W. C. & Benko, M. (1999). Animal adenoviruses. In Encyclopedia of Virology, 2nd edn. pp. 14-21. Edited by A. Granoff & R. G. Webster. New York: Academic Press.
47. Rusvai, M., Harrach, B., Bánrévi, A., Evans, P. S. & Benko, M. (2000). Identification and sequence analysis of the core protein genes of bovine adenovirus 2. Virus Research 70, 25-30.
48. Schumacher, J., Jacobson, E. R., Burns, R. & Tramontin, R. R. (1994). Adenovirus-like infection in two rosy boas (Lichanura trivirgata). Journal of Zoo and Wildlife Medicine 25, 461-465.
49. Sheppard, M. & Trist, H. (1992). Characterization of the avian adenovirus penton base. Virology 188, 881-886.
50. Sheppard, M. & Trist, H. (1993). The identification of genes for the major core proteins of fowl adenovirus serotype 10. Archives of Virology 132, 443-449.
51. Sorden, S. D., Woods, L. W. & Lehmkuhl, H. D. (2000). Fatal pulmonary oedema in white-tailed deer (Odocoileus virginianus) associated with adenovirus infection. Journal of Veterinary Diagnostic Investigations 12, 378-380.
52. Thomson, D., Meers, J. & Harrach, B. (2002). Molecular confirmation of an adenovirus in brushtail possums (Trichosurus vulpecula). Virus Research 83, 189-195.
53. Vrati, S., Boyle, D., Kocherhans, R. & Both, G. W. (1995). Sequence of ovine adenovirus homologues for 100K hexon assembly, 33K, pVIII, and fiber genes: early region E3 is not in the expected location. Virology 209, 400-408.
54. Vrati, S., Brookes, D. E., Strike, P., Khatri, A., Boyle, D. B. & Both, G. W. (1996). Unique genome arrangement of an ovine adenovirus: identification of new proteins and prolemase cleavage sites. Virology 220, 186-199.
55. Weber, J. M. (1995). Adenovirus endopeptidase and its role in virus infection. Current Topics in Microbiology and Immunology 199, 227-235.
56. Webster, A., Russell, S., Talbot, P., Russell, W. C. & Kemp, G. D. (1989). Characterization of the adenovirus proteinase: substrate specificity. Journal of General Virology 70, 3225-3234.
57. Webster, A., Hay, R. T. & Kemp, G. (1993). The adenovirus protease is activated by a virus-encoded disulphide-linked peptide. Cell 72, 97-104.
58. Woods, L. W., Swift, P. K., Barr, B. C., Horzinek, R. C., Nordhausen, R. W., Stillian, M. H., Patton, J. F., Oliver, M. N., Jones, K. R. & MacLachlan, N. J. (1996). Systemic adenovirus infection associated with high mortality in mule deer (Odocoileus hemionus) in California. Veterinary Pathology 33, 125-132.