메뉴 건너뛰기




Volumn 55, Issue 4, 2002, Pages 401-413

The evolution of single-copy Drosophila nuclear 4f-rnp genes: Spliceosomal intron losses create polymorphic alleles

Author keywords

4f rnp gene; Drosophila; Intron evolution; Intron loss; Intron loss polymorphism; Spliceosomal intron

Indexed keywords

COMPLEMENTARY DNA; MESSENGER RNA;

EID: 0036787520     PISSN: 00222844     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00239-002-2336-y     Document Type: Article
Times cited : (30)

References (46)
  • 1
    • 0032097894 scopus 로고    scopus 로고
    • Drosophila melanogaster histone H2B retropseudogene is inserted into a region rich in transposable elements
    • Akhmanova A, Hennig W (1998) Drosophila melanogaster histone H2B retropseudogene is inserted into a region rich in transposable elements. Genome 41:396-401
    • (1998) Genome , vol.41 , pp. 396-401
    • Akhmanova, A.1    Hennig, W.2
  • 2
    • 0027263312 scopus 로고
    • Evolution of the Adh locus in the Drosophila willistoni group: The loss of an intron, and shift in codon usage
    • Anderson CL, Carew EA, Powell JR (1993) Evolution of the Adh locus in the Drosophila willistoni group: The loss of an intron, and shift in codon usage. Mol Biol Evol 10: 605-618
    • (1983) Mol Biol Evol , vol.10 , pp. 605-618
    • Anderson, C.L.1    Carew, E.A.2    Powell, J.R.3
  • 3
    • 0020710981 scopus 로고
    • Pseudogenes for human small nuclear RNA U3 appear to arise by integration of self-primed reverse transcripts of the RNA into new chromosomal sites
    • Bernstein LB, Mount SM, Weiner AM (1983) Pseudogenes for human small nuclear RNA U3 appear to arise by integration of self-primed reverse transcripts of the RNA into new chromosomal sites. Cell 32:461-472
    • (1983) Cell , vol.32 , pp. 461-472
    • Bernstein, L.B.1    Mount, S.M.2    Weiner, A.M.3
  • 4
    • 0035201633 scopus 로고    scopus 로고
    • The intrinsically unstable life of DNA triplet repeats associated with human hereditary disorders
    • Bowater RP, Wells RD (2000) The intrinsically unstable life of DNA triplet repeats associated with human hereditary disorders. Prog Nucl Acid Res Mol Biol 66: 159-202
    • (2000) Prog Nucl Acid Res Mol Biol , vol.66 , pp. 159-202
    • Bowater, R.P.1    Wells, R.D.2
  • 5
    • 0010620687 scopus 로고    scopus 로고
    • A highly invasive group 1 intron in the mitochondrial coxI gene
    • Moller IM, Gardestrom P, Glaser E (eds). Backhuys Press, Leiden
    • Cho Y, Adams K, Qiu Y-L, Kuhlman P, Vaughn JC, Palmer JD (1998a) A highly invasive group 1 intron in the mitochondrial coxI gene. In: Moller IM, Gardestrom P, Glaser E (eds) Plant mitochondria: From gene to function. Backhuys Press, Leiden, pp 19-23
    • (1998) Plant Mitochondria: From Gene to Function , pp. 19-23
    • Cho, Y.1    Adams, K.2    Qiu, Y.-L.3    Kuhlman, P.4    Vaughn, J.C.5    Palmer, J.D.6
  • 6
    • 0032564449 scopus 로고    scopus 로고
    • Explosive invasion of plant mitochondria by a group 1 intron
    • Cho Y, Qiu Y-L, Kuhlman P, Palmer JD (1998b) Explosive invasion of plant mitochondria by a group 1 intron. Proc Natl Acad Sci USA 95:14244-14249
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 14244-14249
    • Cho, Y.1    Qiu, Y.-L.2    Kuhlman, P.3    Palmer, J.D.4
  • 7
    • 0029837344 scopus 로고    scopus 로고
    • Distribution and evolution of introns in Drosophila amylase genes
    • DaLage J-L, Wegnez M, Cariou M-L (1996) Distribution and evolution of introns in Drosophila amylase genes. J Mol Evol 43:334-347
    • (1996) J Mol Evol , vol.43 , pp. 334-347
    • DaLage, J.-L.1    Wegnez, M.2    Cariou, M.-L.3
  • 8
    • 0002594984 scopus 로고
    • A rapid DNA isolation procedure for small quantities of fresh leaf tissue
    • Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 19:11-15
    • (1987) Phytochem Bull , vol.19 , pp. 11-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 9
    • 0029894792 scopus 로고    scopus 로고
    • The yeast genome project: What did we learn?
    • Dujon B (1996) The yeast genome project: What did we learn? Trends Genet 12:263-270
    • (1996) Trends Genet , vol.12 , pp. 263-270
    • Dujon, B.1
  • 10
    • 0023649687 scopus 로고
    • Pseudogenes in yeast?
    • Fink GR (1987) Pseudogenes in yeast? Cell 49:5-6
    • (1987) Cell , vol.49 , pp. 5-6
    • Fink, G.R.1
  • 13
    • 0010587443 scopus 로고
    • Insect systematics, phylogeny and evolution
    • Chapman and Hall, New York
    • Gullan PJ, Cranston PS (1994) Insect systematics, phylogeny and evolution. In: The insects: An outline of entomology. Chapman and Hall, New York, pp 182-197
    • (1994) The Insects: An Outline of Entomology , pp. 182-197
    • Gullan, P.J.1    Cranston, P.S.2
  • 14
    • 0004226825 scopus 로고    scopus 로고
    • Sinauer Associates, Sunderland, MA
    • rd ed. Sinauer Associates, Sunderland, MA, pp 315-395
    • (1997) rd Ed. , pp. 315-395
    • Hartl, D.L.1    Clark, A.G.2
  • 16
    • 0029773693 scopus 로고    scopus 로고
    • Spatial and temporal expression of 4f-rnp gene in Drosophila melanogaster
    • Hess KA, Simone AA, Petschek JP (1996) Spatial and temporal expression of 4f-rnp gene in Drosophila melanogaster. Differentiation 61:103-111
    • (1996) Differentiation , vol.61 , pp. 103-111
    • Hess, K.A.1    Simone, A.A.2    Petschek, J.P.3
  • 18
    • 0025910757 scopus 로고
    • Processed pseudogenes in Drosophila
    • Jeffs P, Ashburner M (1991) Processed pseudogenes in Drosophila. Proc R Soc Lond B 244:151-159
    • (1991) Proc R Soc Lond B , vol.244 , pp. 151-159
    • Jeffs, P.1    Ashburner, M.2
  • 19
    • 0002491467 scopus 로고
    • Preparation of nucleic acids
    • Roberts DB (ed). IRL Press, Oxford
    • Jowett T (1986) Preparation of nucleic acids. In: Roberts DB (ed) Drosophila, a practical approach. IRL Press, Oxford, pp 275-286
    • (1986) Drosophila, a Practical Approach , pp. 275-286
    • Jowett, T.1
  • 20
    • 0033840853 scopus 로고    scopus 로고
    • Phylogenetic position of the subgenus Lordiphoso of the genus Drosophila (Diptera: Drosophilidae) inferred from alcohol dehydrogenase (Adh) gene sequences
    • Katoh T, Tamura K, Aotsuka T (2000) Phylogenetic position of the subgenus Lordiphoso of the genus Drosophila (Diptera: Drosophilidae) inferred from alcohol dehydrogenase (Adh) gene sequences. J Mol Evol 51:122-130
    • (2000) J Mol Evol , vol.51 , pp. 122-130
    • Katoh, T.1    Tamura, K.2    Aotsuka, T.3
  • 21
    • 0028222134 scopus 로고
    • Phylogeny of Drosophila and related genera inferred from the nucleotide sequence of the CuZn Sod gene
    • Kwiatowski J, Skarecky D, Bailey K, Ayala FJ (1994) Phylogeny of Drosophila and related genera inferred from the nucleotide sequence of the CuZn Sod gene. J Mol Evol 38:443-454
    • (1994) J Mol Evol , vol.38 , pp. 443-454
    • Kwiatowski, J.1    Skarecky, D.2    Bailey, K.3    Ayala, F.J.4
  • 22
    • 0020701499 scopus 로고
    • How mammalian RNA returns to its genome
    • Lewin B (1983) How mammalian RNA returns to its genome. Science 219:1052-1054
    • (1983) Science , vol.219 , pp. 1052-1054
    • Lewin, B.1
  • 23
    • 0026813040 scopus 로고
    • The β-tubulin gene family of pea: Primary structures, genomic organization and intron-dependent evolution of genes
    • Liaud M-F, Brinkmann H, Cerff R (1992) The β-tubulin gene family of pea: Primary structures, genomic organization and intron-dependent evolution of genes. Plant Mol Biol 18:639-651
    • (1992) Plant Mol Biol , vol.18 , pp. 639-651
    • Liaud, M.-F.1    Brinkmann, H.2    Cerff, R.3
  • 24
    • 0027905006 scopus 로고
    • Natural selection and the origin of jingwei, a chimeric processed functional gene in Drosophila
    • Long M, Langley CH (1993) Natural selection and the origin of jingwei, a chimeric processed functional gene in Drosophila. Science 260:91-95
    • (1993) Science , vol.260 , pp. 91-95
    • Long, M.1    Langley, C.H.2
  • 25
    • 0032852328 scopus 로고    scopus 로고
    • Origin of new genes and sources for N-terminal domain of the chimerical gene, jingwei, in Drosophila
    • Long M, Wang W, Zhang J (1999) Origin of new genes and sources for N-terminal domain of the chimerical gene, jingwei, in Drosophila. Gene 238:135-141
    • (1999) Gene , vol.238 , pp. 135-141
    • Long, M.1    Wang, W.2    Zhang, J.3
  • 26
    • 0028089808 scopus 로고
    • Structure of the Drosophila melanogaster glutathione-dependent formaldehyde dehydrogenase/octanol dehydrogenase gene (class III alcohol dehydrogenase)
    • Luque T, Atrian S, Danielsson O, Jornvall H, Gonzalez-Duarte R (1994) Structure of the Drosophila melanogaster glutathione-dependent formaldehyde dehydrogenase/octanol dehydrogenase gene (class III alcohol dehydrogenase). Eur J Biochem 225:985-993
    • (1994) Eur J Biochem , vol.225 , pp. 985-993
    • Luque, T.1    Atrian, S.2    Danielsson, O.3    Jornvall, H.4    Gonzalez-Duarte, R.5
  • 27
    • 0025195576 scopus 로고
    • The gain of two chloroplast tRNA introns marks the green algal ancestors of land plants
    • Manhart JR, Palmer JD (1990) The gain of two chloroplast tRNA introns marks the green algal ancestors of land plants. Nature 345:268-270
    • (1990) Nature , vol.345 , pp. 268-270
    • Manhart, J.R.1    Palmer, J.D.2
  • 28
    • 0024974965 scopus 로고
    • Structure, evolution and anaerobic regulation of a nuclear gene encoding cytosolic glyceraldehyde-3-phosphate dehydrogenase from maize
    • Martinez P, Martin W, Cerff R (1989) Structure, evolution and anaerobic regulation of a nuclear gene encoding cytosolic glyceraldehyde-3-phosphate dehydrogenase from maize. J Mol Biol 208:551-565
    • (1989) J Mol Biol , vol.208 , pp. 551-565
    • Martinez, P.1    Martin, W.2    Cerff, R.3
  • 29
    • 0000508541 scopus 로고
    • Phylogeny and classification of the Muscomorpha
    • McAlpine JF, Wood DM (eds). Agriculture Canada, Monograph No. 32, Ottawa, CA
    • McAlpine JF (1989) Phylogeny and classification of the Muscomorpha. In: McAlpine JF, Wood DM (eds) Manual of nearctic Diptera, vol 3. Agriculture Canada, Monograph No. 32, Ottawa, CA, pp 397-1518
    • (1989) Manual of Nearctic Diptera , vol.3 , pp. 397-1518
    • McAlpine, J.F.1
  • 30
    • 0023461268 scopus 로고
    • Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction
    • Mullis KB, Faloona FA (1987) Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction. Methods Enzymol 155:335-350
    • (1987) Methods Enzymol , vol.155 , pp. 335-350
    • Mullis, K.B.1    Faloona, F.A.2
  • 31
    • 0026278999 scopus 로고
    • Molecular phylogeny of the subgenus Sophophora of Drosophila derived from large subunit of ribosomal RNA sequences
    • Pelandakis M, Higgins DC, Solignac M (1991) Molecular phylogeny of the subgenus Sophophora of Drosophila derived from large subunit of ribosomal RNA sequences. Genetica 84:87-94
    • (1991) Genetica , vol.84 , pp. 87-94
    • Pelandakis, M.1    Higgins, D.G.2    Solignac, M.3
  • 32
    • 0030604716 scopus 로고    scopus 로고
    • RNA editing in Drosophila 4f-rnp gene nuclear transcripts by multiple A-to-G conversions
    • Petschek JP, Mermer MJ, Scheckelhoff MR, Simone AA, Vaughn JC (1996) RNA editing in Drosophila 4f-rnp gene nuclear transcripts by multiple A-to-G conversions. J Mol Biol 259:885-890
    • (1996) J Mol Biol , vol.259 , pp. 885-890
    • Petschek, J.P.1    Mermer, M.J.2    Scheckelhoff, M.R.3    Simone, A.A.4    Vaughn, J.C.5
  • 33
    • 0031578712 scopus 로고    scopus 로고
    • RNA editing and alternative splicing generate mRNA transcript diversity from the Drosophila 4f-rnp locus
    • Petschek JP, Scheckelhoff MR, Mermer M J, Vaughn JC (1997) RNA editing and alternative splicing generate mRNA transcript diversity from the Drosophila 4f-rnp locus. Gene 204:267-276
    • (1997) Gene , vol.204 , pp. 267-276
    • Petschek, J.P.1    Scheckelhoff, M.R.2    Mermer, M.J.3    Vaughn, J.C.4
  • 34
    • 0033403583 scopus 로고    scopus 로고
    • Evolution of multiple kinds of female sperm-storage organs in Drosophila
    • Pitnick S, Markow T, Spicer GS (1999) Evolution of multiple kinds of female sperm-storage organs in Drosophila. Evolution 53:1804-1822
    • (1999) Evolution , vol.53 , pp. 1804-1822
    • Pitnick, S.1    Markow, T.2    Spicer, G.S.3
  • 38
    • 0016700864 scopus 로고
    • Detection of specific sequences among DNA fragments separated by gel electrophoresis
    • Southern EM (1975) Detection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol 98:503-517
    • (1975) J Mol Biol , vol.98 , pp. 503-517
    • Southern, E.M.1
  • 39
    • 0023704234 scopus 로고
    • Molecular evolution among some Drosophila species groups as indicated by two-dimensional electrophoresis
    • Spicer GS (1988) Molecular evolution among some Drosophila species groups as indicated by two-dimensional electrophoresis. J Mol Evol 27:250-260
    • (1988) J Mol Evol , vol.27 , pp. 250-260
    • Spicer, G.S.1
  • 40
    • 0001323358 scopus 로고
    • The problem of phylogeny in the genus Drosophila
    • Throckmorton LH (1962) The problem of phylogeny in the genus Drosophila. Univ Tex Publ 6205:207-343
    • (1962) Univ Tex Publ , vol.6205 , pp. 207-343
    • Throckmorton, L.H.1
  • 41
    • 0003884440 scopus 로고
    • Rapid isolation of plasmid DNA
    • Titus DE (ed). Madison, WI
    • nd ed. Madison, WI, pp 106-108
    • (1991) nd Ed. , pp. 106-108
    • Titus, D.E.1
  • 42
    • 0033850591 scopus 로고    scopus 로고
    • The origin of the jingwei gene and the complex modular structure of its parental gene, yellow emperor, in Drosophila melanogaster
    • Wang W, Zhang J, Alvarez C, Llopart A, Long M (2000). The origin of the jingwei gene and the complex modular structure of its parental gene, yellow emperor, in Drosophila melanogaster. Mol Biol Evol 17:1294-1301
    • (2000) Mol Biol Evol , vol.17 , pp. 1294-1301
    • Wang, W.1    Zhang, J.2    Alvarez, C.3    Llopart, A.4    Long, M.5
  • 43
    • 0022555861 scopus 로고
    • Nonviral retroposons: Genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information
    • Weiner AM, Deininger PL, Efstratiadis A (1986) Nonviral retroposons: genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information. Annu Rev Biochem 55:631-661
    • (1986) Annu Rev Biochem , vol.55 , pp. 631-661
    • Weiner, A.M.1    Deininger, P.L.2    Efstratiadis, A.3
  • 44
    • 0001528513 scopus 로고
    • Analysis of the metaphase and salivary chromosome morphology within the genus Drosophila
    • Wharton LT (1943) Analysis of the metaphase and salivary chromosome morphology within the genus Drosophila. Univ Tex Publ 4313:282-319
    • (1943) Univ Tex Publ , vol.4313 , pp. 282-319
    • Wharton, L.T.1
  • 45
    • 0031084115 scopus 로고    scopus 로고
    • The Strepsiptera problem: Phylogeny of the holometabolous insect orders inferred from 18S and 28S ribosomal DNA sequences and morphology
    • Whiting MF, Carpenter JC, Wheeler QD, Wheeler WC (1997) The Strepsiptera problem: phylogeny of the holometabolous insect orders inferred from 18S and 28S ribosomal DNA sequences and morphology. Syst Biol 46:1-68
    • (1997) Syst Biol , vol.46 , pp. 1-68
    • Whiting, M.F.1    Carpenter, J.C.2    Wheeler, Q.D.3    Wheeler, W.C.4
  • 46
    • 0032536847 scopus 로고    scopus 로고
    • sn-Glycerol-3-phosphate dehydrogenase in the honey bee Apis mellifera - An unusual phenotype associated with the loss of introns
    • Wilanowski TM, Gibson JB (1998) sn-Glycerol-3-phosphate dehydrogenase in the honey bee Apis mellifera--An unusual phenotype associated with the loss of introns. Gene 209:71-76
    • (1998) Gene , vol.209 , pp. 71-76
    • Wilanowski, T.M.1    Gibson, J.B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.