Comparison of anaerobic dechlorinating enrichment cultures maintained on tetrachloroethene, trichloroethene, cis-dichloroethene and vinyl chloride

Water Research

Volumn 36, Issue 17, 2002, Pages 4193-4202

  Duhamel, Melanie ^a   Wehr, Stephan D ^a   Yu, Lawrence ^a   Rizvi, Homa ^a   Seepersad, David ^a   Dworatzek, Sandra ^a   Cox, Evan E ^b   Edwards, Elizabeth A ^a  

^a UNIVERSITY OF TORONTO   (Canada)

^b GEOSYNTEC CONSULTANTS   (United States)

Author keywords

Anaerobic reductive dechlorination; Bioaugmentation; DGGE; Microorganisms

Indexed keywords

CHLORINE COMPOUNDS; DECHLORINATION; DNA; ELECTROPHORESIS; RNA; WATER BACTERIOLOGY;

MICROBIAL CULTURES;

WATER ANALYSIS;

1,1,1 TRICHLOROETHANE; CHLORINE DERIVATIVE; CHLOROFORM; DICHLOROETHENE; GROUND WATER; TETRACHLOROETHANE; TRICHLOROETHYLENE; UNCLASSIFIED DRUG; VINYL CHLORIDE; CHLORINE; RNA 16S; TETRACHLOROETHYLENE;

ANAEROBIC PROCESS; MICROORGANISM; TETRACHLOROETHENE; TRICHLOROETHYLENE;

ARTICLE; BACTERIUM; BACTERIUM CULTURE; CHLORINATION; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; DECHLORINATION; DEHALOCOCCOIDES ETHENOGENES; DNA SEQUENCE; ENRICHMENT CULTURE; GENE AMPLIFICATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLLUTANT; PRIORITY JOURNAL; SOIL; ANAEROBIC BACTERIUM; CLASSIFICATION; GENETICS; METABOLISM; METHODOLOGY; SPECIES DIFFERENCE; TIME; WATER MANAGEMENT; WATER POLLUTANT;

BACTERIA (MICROORGANISMS); DEHALOCOCCOIDES ETHENOGENES;

BACTERIA, ANAEROBIC; CHLORINE; RNA, RIBOSOMAL, 16S; SPECIES SPECIFICITY; TETRACHLOROETHYLENE; TIME FACTORS; TRICHLOROETHYLENE; VINYL CHLORIDE; WATER POLLUTANTS, CHEMICAL; WATER PURIFICATION;

EID: 0036771968     PISSN: 00431354     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0043-1354(02)00151-3     Document Type: Article

References (45)

1. Freedman D.L., Gossett J.M. Biological reductive dechlorination of tetrachloroethylene and trichloroethylene to ethylene under methanogenic conditions. Appl Environ Microbiol. 55:1989;2144-2151.
2. Major D.M., Hodgins E.W., Butler B.J. Field and laboratory evidence of in situ biotransformation of tetrachloroethene to ethene and ethane at a chemical transfer facility in North Toronto. Hinchee R.E., Olfenbuttel R.F. On-site bioremediation. 1991;147-171 Butterworth-Heinemann, Stoneham.
3. Chang Y.C., Hatsu M., Jung K., Yoo Y.S., Takamizawa K. Isolation and characterization of a tetrachloroethylene dechlorinating bacterium, Clostridium bifermentans DPH-1. J Biosci Bioeng. 89:2000;489-491.
4. Gerritse J., Drzyzga O., Kloetstra G., Keijmel M., Wiersum L.P., Hutson R., Collins M.D., Gottschal J.C. Influence of different electron donors and accepters on dehalorespiration of tetrachloroethene by Desulfitobacterium frappieri TCE1. Appl Environ Microbiol. 65:1999;5212-5221.
5. Holliger C., Hahn D., Harmsen H., Ludwig W., Schumacher W., Tindall B., Vazquez F., Weiss N., Zehnder A.J.B. Dehalobacter restrictus gen. Nov. and sp. nov., a strictly anaerobic bacterium that reductively dechlorinates tetra- and trichloroethene in an anaerobic respiration. Arch Microbiol. 169:1998;313-321.
6. Krumholz L.R., Sharp R., Fishbain S.S. A freshwater anaerobe coupling acetate oxidation to tetrachloroethylene dehalogenation. Appl Environ Microbiol. 62:1996;4108-4113.
7. Miller E., Wohlfarth G., Diekert G. Studies on tetrachloroethene respiration in Dehalospirillum multivorans. Arch Microbiol. 166:1997;379-387.
8. Scholz-Muramatsu H., Neumann A., Messmer M., Moore E., Diekert G. Isolation and characterization of Dehalospirillum multivorans gen-nov, sp-nov, a tetrachloroethene-utilizing, strictly anaerobic bacterium. Arch Microbiol. 163:1995;48-56.
9. Wild A.P., Hermann R., Leisinger T. Isolation of an anaerobic bacterium which reductively dechlorinateds tetrachloroethene and trichloroethene. Biodegradation. 7:1996;507-511.
10. Maymó-Gatell X., Chien Y.-T., Gossett J.M., Zinder S.H. Isolation of a bacterium that reductively dechlorinates tetrachloroethene to ethene. Science. 276:1997;1568-1571.
11. Elberson MA, Tabinowski JA, Ebersole RC, Ellis DE, Hendrickson ER. Detection and characterization of Dehalococcoides ethenogenes' 16S rRNA sequences in groundwater and soils from waste sites contaminated with PCE and TCE (poster presentation). In: 100th General Meeting of the American Society for Microbiology, Abstract Q-125. Los Angeles, CA: American Society for Microbiology.
12. Fennell D.E., Carroll A.B., Gossett J.M., Zinder S.H. Assessment of indigenous reductive dechlorinating potential at a TCE-contaminated site using microcosms, polymerase chain reaction analysis, and site data. Environ Sci Technol. 35:2001;1830-1839.
13. Hendrickson E.R., Payne J.A., Young RM Starr M.G., Perry M.P., Fahnestock S., Ellis D.E., Ebersole R.C. Molecular analysis of Dehalococcoides 16S rDNA from chloroethene-contaminated sites throughout North America and Europe. Appl Environ Microbiol. 68:2002;485-496.
14. Edwards E, Cox E. Field and laboratory studies of sequential anaerobic-aerobic chlorinated solvent biodegradation. In: In situ and on-site bioremediation, vol. 3, Fourth International Symposium on In Situ and On-Site Bioreclamation, New Orleans, LA. Columbus, OH: Battelle Press, 1997. p. 261-5.
15. Loffler F.E., Sun Q., Li J.R., Tiedje J.M. 16S rRNA gene-based detection of tetrachloroethene-dechlorinating Desulfuromonas and Dehalococcoides species. Appl Environ Microbiol. 66:2000;1369-1374.
16. Magnuson J.K., Romine M.F., Burris D.R., Kingsley M.T. Trichloroethene reductive dehalogenase from Dehalococcoides ethenogenes. sequence of tceA and substrate range characterization Appl Environ Microbiol. 66:2000;5141-5147.
17. Maymó-Gatell X., Nijenhuis I., Zinder S.H. Reductive dechlorination of cis-1,2-dichloroethene and vinyl chloride by "Dehalococcoides ethenogenes" Environ Sci Technol. 35:2001;516-521.
18. Cox E, McMaster M, McAlary TA, Major DW, Lehmicke L, Edwards EA. Accelerated bioremediation of trichloroethene: From field and laboratory studies to full scale. In: First International Conference on Remediation of Chlorinated and Recalcitrant Compounds. Monterey, California: Battelle, 1998.
19. Duhamel M. Optimization of Conditions for Bioaugmentation of TCE-contaminated Sites. B.A.Sc. thesis, University of Toronto, 2000.
20. Major DW, McMaster ML, Cox EE, Lee BJ, Gentry EE, Edwards EA, Dworatzek S. Successful field demonstration of bioaugmentation to degrade PCE and TCE to ethene. In: In Situ and On-site Bioremediation Conference. San Diego, CA: Battelle, 2001.
21. Edwards E.A., Grbic-Galic D. Anaerobic degradation of toluene and o-xylene by a methanogenic consortium. Appl Environ Microbiol. 60:1994;313-322.
22. Miller D.N., Bryant J.E., Madsen E.L., Ghiorse W.C. Evaluation and optimization of DNA extraction and purification procedures for soil and sediment samples. Appl Environ Microbiol. 65:1999;4715-4724.
23. Muyzer G., Dewaal E.C., Uitterlinden A.G. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol. 59:1993;695-700.
24. Maidak B.L., Cole J.R., Lilburn T.G., Parker C.T.J., Saxman P.R., Farris R.J., Garrity G.M., Olsen G.J., Schmidt T.M., Tiedje J.M. The RDP-II (Ribosomal Database Project). Nucleic Acids Res. 29:2001;173-174.
25. Mackay D., Shiu W.Y. A critical review of Henry's Law constants for chemicals of environmental interest. J Phys Chem Ref Data. 10:1981;1175-1199.
26. Bradford M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem. 72:1976;248-254.
27. Flynn S.J., Loffler F.E., Tiedje J.M. Microbial community changes associated with a shift from reductive dechlorination of PCE to reductive dechlorination of cis-DCE and VC. Environ Sci Technol. 34:2000;1056-1061.
28. Maymó-Gatell X., Anguish T., Zinder S.H. Reductive dechlorination of chlorinated ethenes and 1,2 dichloroethane by "Dehalococcoides ethenogenes" 195. Appl Environ Microbiol. 65:1999;3108-3113.
29. Ficker M., Krastel K., Orlicky S., Edwards E. Molecular characterization of a toluene degrading methanogenic consortium. Appl Environ Microbiol. 65:1999;5576-5585.
30. Florencio L., Field J.A., Lettinga G. Importance of cobalt for individual trophic groups in an anaerobic methanol-degrading consortium. Appl Environ Microbiol. 60:1994;227-234.
31. Wild A.P., Winkelbauer W., Leisinger T. Anaerobic dechlorination of trichloroethene, tetrachloroethene and 1,2-dichloroethane by and acetogenic mixed culture in a fixed-bed reactor. Biodegradation. 6:1995;309-318.
32. Chen C., Ballapragada B.S., Puhakka J.A., Strand S.E., Ferguson J.F. Anaerobic transformation of 1,1,1-trichloroethane by municipal digester sludge. Biodegradation. 10:1999;297-305.
33. Vogel T.M., McCarty P.L. Abiotic and biotic transformation of 1,1,1-trichloroethane under methanogenic conditions. Environ Sci Technol. 21:1987;1208-1213.
34. Erasin B.R., Turner A.P.F., Wheatley A.D. A fixed-film bioassay for the detection of micropollutants toxic to anaerobic sludges. Anal Chim Acta. 298:1994;1-10.
35. Chidthaisong A., Conrad R. Specificity of chloroform, 2-bromoethanesulfonate and fluoroacetate to inhibit methanogenesis and other anaerobic processes in anoxic rice field soil. Soil Biol Biochem. 32:2000;977-988.
36. Bagley D.M., Lalonde M., Kaseros V., Stasiuk K.E., Sleep B.E. Acclimation of anaerobic systems to biodegrade tetrachloroethene in the presence of carbon tetrachloride and chloroform. Water Res. 34:2000;171-178.
37. Adamson D.T., Parkin G.F. Impact of mixtures of chlorinated aliphatic hydrocarbons on a high-rate, tetrachloroethene-dechlorinating enrichment culture. Environ Sci Technol. 34:2000;1959-1965.
38. Ferris M.J., Ward D.M. Seasonal distributions of dominant 16S rRNA-defined populations in a hot spring microbial mat examined by denaturing gradient gel electrophoresis. Appl Environ Microbiol. 63:1997;1375-1381.
39. Altschul S.F., Gish W., Miller W., Myers E.W., Lipman D.J. Basic local alignment search tool. J Mol Biol. 215:1990;403-410.
40. Adrian L., Szewzyk U., Wecke J., Gorlsch H. Bacterial dehalorespiration with chlorinated benzenes. Nature. 408:2000;580-583.
41. Kevbrina M.V., Pusheva M.A. Excretion of acetate in homoacetogenic bacteria. Microbiol. 65:1996;10-14.
42. Eisenmann E., Beuerle J., Sulger K., Kroneck P.M.H., Schumacher W. Lithotrophic growth of Sulfurospirillum deleyianum with sulfide as electron-donor coupled to respiratory reduction of nitrate to ammonia. Arch Microbiol. 164:1995;180-185.
43. Miroshnichenko M.L., Rainey R.F., Rhode M., Bonch-Osmolovskaya E.A. Hippea maritima gen. nov., sp. nov., a new genus of thermophilic, sulfur-reducing bacterium from submarine hot vents. Int J Syst Bacteriol. 49:1999;1033-1038.
44. Bloom Y., Aravena R., Hunkeler D., Edwards E., Frape S.K. Carbon isotope fractionation during microbial dechlorination of trichloroethene, cis-1,2 dichloroethene, and vinyl chloride. implications for assessment of natural attenuation Environ Sci Technol. 34:2000;2768-2772.
45. Slater G.F., Lollar B.S., Sleep B.E., Edwards E.A. Variability in carbon isotope fractionation during biodegradation of contaminated ethenes. implications for field applications Environ Sci Technol. 35:2001;901-907.