Comparison of phospholipid fatty acid composition in percolating water, floodwater, and the plow layer soil during the rice cultivation period in a japanese paddy field

Soil Science and Plant Nutrition

Volumn 48, Issue 4, 2002, Pages 595-600

  Shimizu, Miho ^a   Nakajima, Yasunori ^b   Matsuya, Kazuo ^b   Kimura, Makoto ^a  

^a NAGOYA UNIVERSITY   (Japan)

^b AICHI PREFECTURAL UNIVERSITY   (Japan)

Author keywords

Floodwater; Microbiota; Percolating water; Phospholipid fatty acid; Rice field

Indexed keywords

MICROBIOTA;

EID: 0036691622     PISSN: 00380768     EISSN: 17470765     Source Type: Journal    
DOI: 10.1080/00380768.2002.10409243     Document Type: Article

References (18)

1. Arao, T, Okano, S and Kanamori, T. 1998. Analysis of the phospholipid fatty acids of upland light colored Andosol and the relationship among the size of biomass based on phospho lipid fatty acid analysis, microscopical counts and chloroform-incubation. Jpn. J. Soil Sci. Plant Nutr., 69 : 38 – 46. in Japanese with English summary.
2. Balkwill, DL, Leach, FR, Wilson, JT, Mcnabb, JF and White, DC. 1988. Equivalence of microbial biomass measures based on membrane lipid and cell wall components, adenosine triphosphate, and direct counts in substrate aquifer sediments. Microb. Ecol., 16 : 73 – 84.
3. Bligh, EG and Dyer, WJ. 1959. A rapid method of total lipid extraction and purification. Can. J. Biochem. Physiol., 37 : 911 – 917.
4. Borga, P, Nilsson, M and Tunlid, A. 1994. Bacterial communities in peat in relation to botanical composition as revealed by phospholipid fatty acid analysis. Soil Biol. Biochem., 26 : 841 – 848.
5. Bossio, DA and Scow, KM. 1998. Impacts of carbon and flooding on soil microbial communities: Phospholipid fatty acid profiles and substrate utilization patterns. Microbial Ecol., 35 : 265 – 278.
6. Frostegård, Å, Petersen, SO, Bååth, E and Nielsen, TH. 1997. Dynamics of a microbial community associated with manure hot spots as revealed by phospholipid fatty acid analyses. Appl. Environ. Microbiol., 63 : 2224 – 2231.
7. Frostegård, Å, Tunlid, A and Bååth, E. 1993. Phospholipid fatty acid composition, biomass, and activity of microbial communities from two soil types experimentally exposed to different heavy metals. Appl. Environ. Microbiol., 59 : 3605 – 3617.
8. Frostegård, Å, Tunlid, A and Bååth, E. 1996. Changes in microbial community structure during long-term incubation in two soils experimentally contaminated with metals. Soil Biol. Biochem., 29 : 55 – 63.
9. Harwood, JL and Russel, NJ. 1984. Lipids in Plants and Microbes, 7 – 9. London : Allen and Unwin. 35–36.
10. Kimura, M, Kishi, H, Okabe, A and Maie, N. 2001a. Phospholipid fatty acid composition of the microbiota in the percolating water from a rice paddy microcosm. Soil Sci Plant Nutr., 47 : 533 – 545.
11. Kimura, M, Miyaki, M, Fujinaka, K and Maie, N. 2001b. Microbiota responsible for the decomposition of rice straw in a submerged paddy soil estimated from phospholipid fatty acid composition. Soil Sci. Plant Nutr., 47 : 569 – 578.
12. Okabe, A, Oike, H, Toyota, K and Kimura, M. 2000a. Comparison of phospholipid fatty acid composition in floodwater and plow layer soil during the rice cultivation period in a Japanese paddy field. Soil Sci. Plant Nutr., 46 : 893 – 904.
13. Okabe, A, Toyota, K and Kimura, M. 2000b. Seasonal variations of phoshpolipid fatty acid composition in the floodwater of a Japanese paddy field under a long-fertilizer trial. Soil Sci. Plant Nutr., 46 : 177 – 188.
14. Ratledge, C and Wilkinson, SG. 1988. Microbial Lipids, Vol. 1, 23 – 29. London : Academic Press. 117–457, 699–794.
15. Reichardt, W, Mascarina, G, Padre, B and Doll, L. 1997. Microbial communities of continuously cropped, irrigated rice fields. Appl. Environ. Microbiol., 63 : 233 – 238.
16. Vestal, JR and White, DC. 1989. Lipid analysis in microbial ecology. Quantitative approaches to the study of microbial communities. Bioscience, 39 : 535 – 541.
17. White, DC, Davis, WM, Nickels, JS, King, JD and Bobbie, RJ. 1979. Determination of the sedimentary microbial biomass by extractable lipid phosphate. Oecologia, 40 : 51 – 62.
18. Zelles, L. 1999. Fatty acid patterns of phospholipid and lipopolysaccharides in the characterization of microbial communities in soil: a review. Biol. Fertil. Soils, 29 : 111 – 129.