Application of cDNA microarray technique to detection of gene expression in host cells infected with viruses

Acta Virologica

Volumn 46, Issue 3, 2002, Pages 141-146

  Nam, J H ^a   Yu, C H ^a   Hwang, K A ^a   Kim, J S ^b   Ahn, S H ^b   Shin, J Y ^a   Choi, W Y ^a   Joo, Y R ^a   Park, K Y ^a  

^a Korea National Institute of Health   (South Korea)

^b Genomictree Inc   (South Korea)

Author keywords

CDNA microarray; Cluster analysis; Viral infection

Indexed keywords

COMPLEMENTARY DNA; MESSENGER RNA;

ARTICLE; CLUSTER ANALYSIS; DNA MICROARRAY; GENE EXPRESSION; HANTAVIRUS; HOST CELL; HUMAN; HUMAN CELL; JAPANESE ENCEPHALITIS VIRUS; NONHUMAN; REPRODUCIBILITY; VIRUS DIAGNOSIS; VIRUS INFECTION;

ANIMALS; CERCOPITHECUS AETHIOPS; ENCEPHALITIS VIRUS, JAPANESE; GENE EXPRESSION; GENE EXPRESSION PROFILING; HANTAAN VIRUS; MULTIGENE FAMILY; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PHYLOGENY; REPRODUCIBILITY OF RESULTS; RNA, VIRAL; VERO CELLS;

ANIMALIA; HANTAAN VIRUS; HANTAVIRUS; JAPANESE ENCEPHALITIS VIRUS;

EID: 0036457975     PISSN: 0001723X     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (12)

1. Bigger CB, Brasky KM, Lanford RE (2001): DNA microarray analysis of chimpanzee liver during acute resolving hepatitis C virus infection. J. Virol. 75, 7059-7066.
2. Brown PO, Botstein D (1999): Exploring the new world of the genome with DNA microarrays. Nat. Genet. 21 (Suppl. 1), 33-37.
3. Chung YJ, Nam JH, Ban SJ, Cho HW (1996): Antigenic and genetic analysis of Japanese encephalitis virus isolated from Korea. Am. J. Trop. Hyg. 55, 91-97.
4. Duggan DJ, Bittner M, Chen Y, Meltzer P, Trent JM (1999): Expression profiling using cDNA microarrays. Nat. Genet. 21 (Suppl. 1), 10-14.
5. Eisen MB, Spellman PT, Brown PO, Botstein D (1998): Cluster analysis and display of genome-wide expression patterns. Proc. Natl. Acad. Sci. USA 95, 14863-14868.
6. Geiss GK, Bumgarner RE, An MC, Agy MB, Wout AB, Hammersmark E, Carter VS, Upchurch D, Mullins JI, Katze MG (2000): Large-scale monitoring of host cell gene expression during HIV-1 infection using cDNA microarrays. Virology 266, 8-16.
7. Kim JH, Kim HY, Lee YS (2001): A novel method using edge detection for signal extraction from cDNA microarray image analysis. Exp. Mol. Med. 33, 83-88.
8. Lee HW, Lee PW, Johnson KM (1978): Isolation of the etiologic agent of Korean hemorrhagic fever. J. Infect. Dis. 137, 298-302.
9. Lieber M, Smith B, Szakal A, Nelson-Rees W, Todaro G (1976): A continuous tumor cell line from a human lung carcinoma with properties of type II alveolar epithelial cells. Int. J. Cancer 17, 62-70.
10. Manger ID, Relman DA (2000): How the host 'sees' pathogens: Global gene expression responses to infection. Curr. Opin. Immunol. 12, 215-218.
11. Tanishita O, Takahashi Y, Okuno Y, Yamanishi K, Takahashi M (1984): Evaluation of focus reduction neutralization test with peroxidase-antiperoxidase staining technique for hemorrhagic fever with renal syndrome virus. J. Clin. Microbiol. 20, 1213-1215.
12. Zhu H, Cong J-P, Mamtora G, Gingeras T, Shenk T (1998): Cellular gene expression altered by human cytomegalovirus: Global monitoring with oligonucleotide arrays. Proc. Natl. Acad. Sci. USA 95, 14470-14475.