Searching limiting steps in the expression of chloroplast-encoded proteins: Relations between gene copy number, transcription, transcript abundance and translation rate in the chloroplast of Chlamydomonas reinhardtii

Plant Journal

Volumn 31, Issue 2, 2002, Pages 149-160

  Eberhard, Stephan ^a   Drapier, Dominique ^a   Wollman, Francis André ^a  

^a National de la Recherche Scientifique Université Pierre et Marie Curie   (France)

Author keywords

Chlamydomonas; Chloroplast; FdUrd; Gene expression; Rifampicin

Indexed keywords

FLOXURIDINE; MESSENGER RNA; PLANT RNA; RIFAMPICIN; VEGETABLE PROTEIN;

ANIMAL; ARTICLE; CHLAMYDOMONAS REINHARDTII; CHLOROPLAST; CYTOLOGY; DRUG EFFECT; GENE DOSAGE; GENE EXPRESSION REGULATION; GENETIC TRANSCRIPTION; GENETICS; GENOME; METABOLISM; PROTEIN SYNTHESIS;

ANIMALS; CHLAMYDOMONAS REINHARDTII; CHLOROPLASTS; FLOXURIDINE; GENE DOSAGE; GENE EXPRESSION REGULATION, PLANT; GENOME, PLANT; PLANT PROTEINS; PROTEIN BIOSYNTHESIS; RIFAMPIN; RNA, MESSENGER; RNA, PLANT; TRANSCRIPTION, GENETIC;

ALGAE; CHLOROPHYLL; DNA; GENES; SYNTHESIS (CHEMICAL);

PHOTOTROPHIC CONDITIONS;

PROTEINS;

ALGAE; CHLAMYDOMONAS; CHLAMYDOMONAS REINHARDTII; CHLOROPHYTA; EUKARYOTA;

EID: 0036324267     PISSN: 09607412     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-313X.2002.01340.x     Document Type: Article

References (63)

1. The role of sigma factors in plastid transcription
2. Participation of nuclear genes in chloroplast gene expression
3. Nucleotide sequences of the continous and separated petA, petB and petD chloroplast genes in Chlamydomonas reinhardtii
4. Structural mechanism for rifampicin inhibition of bacterial RNA polymerase
5. Mutant phenotypes support a Trans-splicing mechanism for the expression of the tripartite psaA gene in the C. reinhardtii chloroplast
6. A novel light-regulated promoter is conserved in cereal and dicot chloroplasts
7. Light-regulated translation of chloroplast mRNAs through redox potential
8. ADP-dependent phosphorylation regulates RNA-binding in vitro: Implications in light-modulated translation
9. Evidence for nuclear control of the expression of the atpA and atpB chloroplast genes in Chlamydomonas
10. The chloroplast atpA gene cluster in Chlamydomonas reinhardtii
11. Disulfide bond formation between RNA binding domains is used to regulate mRNA binding activity of the chloroplast Poly(A)-binding protein
12. The early genetic response to light in the green unicellular algae Chlamydomonas eugametos grown under light/dark cycles involves genes that represent direct responses to light and photosynthesis
13. A nuclear mutation affects the synthesis of the chloroplast psbA product in Chlamydomonas reinhardtii
14. The effects of inhibitors of RNA and protein synthesis on chloroplast structure and function in wildtype Chlamydomonas reinhardtii
15. Pet111p, an inner membrane-bound translational activator that limits expression of the Saccharomyces cerevisiae mitochondrial gene COX2
16. Synthesis of chloroplast ribonucleic acid in Chlamydomonas reinhardtii toluene-treated cells
17. The two RNA polymerases encoded by the nuclear and the plastid compartments transcribe distinct groups of genes in tobacco plastids
18. Regulation of chloroplast translation
19. Mitochondrial and chloroplast phage-type RNA polymerases in Arabidopsis
20. Effects of acetate on facultative autotrophy in Chlamydomonas reinhardtii assessed by photosynthetic measurements and stable isotope analyses
21. Relationship between gene dosage and gene expression in the chloroplast of Chlamydomonas reinhardtii
22. Requirement for cytoplasmic protein synthesis during circadian peaks of transcription of chloroplast-encoded genes in Chlamydomonas
23. Ribosomes pause at specific sites during synthesis of membrane-bound chloroplast reaction center protein D1
24. Protein disulfide isomerase as a regulator of chloroplast translational activation
25. Transcriptional and post-transcriptional regulation of gene expression in plants
26. Redox modulation of chloroplast DNA replication in Chlamydomonas reinhardtii
27. Cell cycle-dependent transcriptional and post-transcriptional regulation of chloroplast gene expression in Chlamydomonas reinhardtii
28. Modification of chloroplast gene transmission in somatic fusion products and vegetative zygotes of Chlamydomonas reinhardtii by 5-fluorodeoxyuridine
29. On the mechanism of rifampicin inhibition of RNA synthesis
30. Synthesis and maturation of chloroplast and cytoplasmic ribosomal RNA in Chlamydomonas reinhardtii
31. Processing and degradation of chloroplast mRNA
32. Chloroplast development and gene expression
33. Dynamic regulation of chloroplast transcription
34. Chloroplast RNA Stability
35. Photosynthetic control of chloroplast gene expression
36. A nuclear mutant of Chlamydomonas reinhardtii defective in photosynthetic photophosphorylation. Characterization of the algal coupling factor ATPase
37. Quantitative analysis of transcription and RNA levels of 15 barley chloroplast genes. Transcription rates and mRNA levels vary over 300-fold; predicted mRNA stabilities vary 30-fold
38. Restriction endonuclease map of the chloroplast DNA of Chlamydomonas reinhardtii
39. Retsriction fragments from Chlamydomonas chloroplast DNA
40. Chlamydomonas reinhardtii as the photosynthetic yeast
41. Posttranscriptional control of chloroplast gene expression. From RNA to photosynthetic complex
42. In vivo analysis of Chlamydomonas chloroplast petD gene expression using stable transformation of b-glucuronidase translational fusions
43. The redox state regulates RNA degradation in the chloroplast of Chlamydomonas reinhardtii
44. Light-regulated and endogenous fluctuations of chloroplast transcript levels in Chlamydomonas. Regulation by transcription and RNA degradation
45. The chloroplastic GrpE homolog of Chlamydomonas: Two isoforms generated by differential splicing
46. A chloroplast-targeted heat shock protein 70 (HSP70) contributes to the photoprotection and repair of photosystem II during and after photoinhibition
47. Differential regulation of chloroplast gene expression in Chlamydomonas reinhardtii during photoacclimation: Light stress transiently suppresses synthesis of the Rubisco LSU protein while enhancing synthesis of the PSII D1 protein
48. rbcL transcript levels in tobacco plastids are independent of light: Reduced dark transcription rate is compensated by increased mRNA stability
49. Expression of a recoded nuclear gene inserted into yeast mitochondria DNA is limited by mRNA-specific translational activation
50. Chloroplast RNA synthesis and processing
51. Transcription and translation on chloroplasts
52. The chloroplast genome
53. Genetic functions of the chloroplast of Chlamydomonas reinhardtii: Effect of rifampicin on chloroplast DNA-dependent RNA polymerase
54. Transcriptional mapping of ribosomal RNA genes of the chloroplast and nucleus of Chlamydomonas reinhardtii
55. Translation of chloroplast psbA mRNA is modulated in the light by counteracting oxidizing and reducing activities
56. The biogenesis and assembly of photosynthetic proteins in thylakoid membranes
57. TCA1, a single nuclear-encoded translational activator specific for petA mRNA in Chlamydomonas reinhardtii chloroplasts
58. Perturbation of chloroplast DNA amounts and chloroplast gene transmission in Chlamydomonas reinhardtii by 5-fluorodeoxyuridine
59. A specific increase in chloroplast gene mutations following growth of Chlamydomonas. 5-Fluorodeoxyuridine
60. Translation in chloroplasts
61. Biogenesis of the chloroplast-encoded D1 protein: Regulation of translation elongation, insertion and assembly into photosystem II