Analysis of phylogenetic relationships among Ascomycota with yeast phases using ribosomal DNA sequences and cell wall sugars

Organisms Diversity and Evolution

Volumn 2, Issue 1, 2002, Pages 1-17

  Schweigkofler, Wolfgang ^a   Lopandic, Ksenija ^b   Molnár, Orsolya ^b   Prillinger, Hansjörg ^b  

^a Research Center for Agriculture and Forestry Laimburg   (Italy)

^b UNIVERSITY OF NATURAL RESOURCES AND LIFE SCIENCES   (Austria)

Author keywords

Ascomycota; Cell wall carbohydrates; Phylogenetics; Protomycetes; Yeasts

Indexed keywords

PHYLOGENY; YEAST;

ASCOMYCOTA; FUNGI; MYXOGASTRIA; NEOLECTA; PNEUMOCYSTIS; PROTOMYCES; SACCHAROMYCETES; SAITOELLA; SCHIZOSACCHAROMYCES; TAPHRINA;

EID: 0036239422     PISSN: 14396092     EISSN: None     Source Type: Journal    
DOI: 10.1078/1439-6092-00029     Document Type: Article

References (120)

1. Description of anamorphic ascomycetous genera and species 70: Saitoella
2. Evolutionary relationships among pathogenic Candida species and relatives
3. Cell wall chemistry, morphogenesis and taxonomy of fungi
4. Loculoascomycete origins and evolution of filamentous ascomycete morphology based on 18S rRNA gene sequence data
5. Two ascomycete classes based on fruiting-body characters and ribosomal DNA sequences
6. Dating the evolutionary radiations of the true fungi
7. Is Penicillium monophyletic? An evolution in the family Trichocomaceae from 18S, 5.8S, and ITS ribosomal DNA sequence data
8. A new pleomorphic ascomycete, Calyptrozyma arxii gen. et sp. nov., isolated from the human lower oesophagus
9. Evolutionary relationships within the Fungi: Analyses of nuclear small subunit rRNA sequences
10. Electronic microscopic observations on the meiotic karyotype of diploid and tetraploid Saccharomyces cerevisiae
11. Phylogenetic relationships among members of the ascomycetous yeast genera Brettanomyces, Debaryomyces, Dekkera, and Kluyveromyces deduced by small-subunit rRNA gene sequences
12. The origin of fungi and pseudofungi
13. Functional analysis of a centromere from fission yeast: A role for centromere-specific repeated DNA sequences
14. Vergleichende untersuchungen zum biochemischen aufbau der zellwand an hefestadien von niederen und höheren basidiomyceten
15. Ribosomal RNA sequences show Pneumocystis carinii to be a member of the fungi
16. Molecular evidence for the evolutionary hiatus between Saccharomyces cerevisiae and Schizosaccharomyces pombe
17. Validation of Symbiotaphrina (imperfect yeasts)
18. Phylogeny of Discomycetes and early radiations of the apothecial Ascomycotina inferred from SSU rDNA sequence data
19. A novel heterothallic ascomycetous yeast species: Stephanoascus smithiae, teleomorph of Candida edax
20. Life with 6000 genes
21. Proton magnetic resonance spectroscopy - An aid in identification and chemotaxonomy of yeasts
22. Saitoella, a new anamorph genus in the Cryptococcaceae to accommodate two Himalayan yeast isolates formerly identified as Rhodotorula glutinis
23. Untersuchungen an 5S ribosomalen ribonukleinsäuren als beitrag zur klärung von systematik und phylogenie der basidiomyceten
24. Phylogenetic analysis of ten black yeast species using nuclear small subunit rRNA gene sequences
25. The nucleotide sequence of the small ribosomal subunit RNA of the yeast Torulaspora delbrueckii
26. The nucleotide sequence of the small ribosomal subunit RNA of the yeast Candida albicans and the evolutionary position of the fungi among the eukaryotes
27. Phylogenetic relationships among ascomycetes and ascomycete-like yeasts as deduced from small ribosomal subunit RNA sequences
28. Phylogenetic analysis of five medically important Candida species as deduced on the basis of small ribosomal subunit RNA sequences
29. Microsporidia are related to fungi: Evidence from the largest subunit of RNA polymerase II and other proteins
30. A study of the carbohydrates in the cell walls of some species of the Entomophtorales
31. High resolution cosmid and P1 maps spanning the 14 Mb genome of the fission yeast S. pombe
32. Phylogenetic placement of Athelia bombacina, Aureobasidium pullulans and Colletotrichum gloeosporioides inferred from sequence comparisons of small-subunit ribosomal RNAs
33. Relatedness of Pseudallescheria, Scedosporium and Graphium pro parte based on SSU rDNA sequences
34. Comparison of nuclear ribosomal DNA sequences from Alternaria species pathogenic to crucifers
35. A simple method for estimating evolutionary rate of base substitutions throughout comparative studies of nucleotide sequences
36. Molecular taxonomy of the fungi
37. Systematics of the ascomycetous yeasts assessed from ribosomal RNA sequence divergence
38. Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial sequences
39. Vergleichende systematische studien an basidiomycetenhefen unter besonderer berücksichtigung der hefestadien
40. Neolecta, a fruit-body-producing genus of the basal ascomycetes, as shown by SSU and LSU rDNA sequences
41. Towards a subordinal classification of the Pezizales (Ascomycota): Phylogenetic analyses of SSU rDNA sequences
42. Relationship of the genus Neolecta (Neolectales ordo nov., Ascomycotina) inferred from 18SrDNA sequences
43. Taxonomic applications of polysaccharides
44. Possible chemotypes from cell wall polysaccharides, as an aid in the systematics of Penicillium and its teleomorphic states Eupenicillium and Talaromyces
45. Taxonomic study of methanol-assimilating yeasts
46. Molecular characterization and genotypic identification of Metschnikowia species
47. Sequence of the gene for the cytoplasmic ribosomal RNA small subunit from Kuyveromyces lactis
48. Identification of ten additional nucleotides in the primary structure of yeast 18S rRNA
49. General primer-mediated PCR for detection of Aspergillus species
50. Molecular characterization and application of random amplified polymorphic DNA analysis of Mrakia and Sterigmatomyces species
51. Molecular characterization of the plant pathogen Verticillium dahliae Kleb. using RAPD-PCR and sequencing of the 18SrRNA-gene
52. Overview of the yeast genome
53. MIPS: A database for protein sequences, homology data and yeast genome information
54. Ubiquinone systems in fungi I. Distribution of ubiquinones in the major families of ascomycetes, basidiomycetes, and deuteromycetes, and their taxonomic implications
55. The a-mating type locus of Cryptococcus neoformans contains a peptide pheromone gene
56. Phylogenetic relationship among several Leptosphaeria species based on their ribosomal DNA sequences
57. Phylogenetic divergence of the entomophthoralean fungi: Evidence from nuclear 18S ribosomal RNA sequence
58. Taxonomic studies on Debaryomyces hansenii (Zopf) Lodder et Kreger-van Rij and related species. I. Chemotaxonomic investigations
59. Mixia osmundae: Transfer from the Ascomycota to the Basidiomycota based on evidence from molecules and morphology
60. The higher fungus Protomyces inouyei has two group I introns in the 18S rRNA gene
61. Phylogenetic relationships among Taphrina, Saitoella, and other higher fungi
62. Archiascomycetes: Detection of a major new lineage within the Ascomycota
63. Phylogenetic position of yeastlike endosymbionts of anobiid beetles
64. The cell wall composition and taxonomy of some basidiomycetes and ascomycetes
65. Phylogenetic relationships among ascomycetous truffles and the true and false morels inferred from 18S and 28S ribosomal DNA sequence analysis
66. Evolutionary position of n-alkane-assimilating yeast Candida maltosa shown by nucleotide sequence of small-subunit ribosomal RNA gene
67. Evolution of basidiomycetous yeasts as deduced from small ribosomal subunit RNA sequences
68. Molecular phylogeny of truffles (Pezizales: Terfeziaceae, Tuberaceae) derived from nuclear rDNA sequence analysis
69. Ein beitrag zur systematik und entwicklungsbiologie höherer pilze: Hefe-typen der basidiomyceten. Teil II: Microbotryum-typ
70. Ein beitrag zur systematik und entwicklungsbiologie höherer pilze: Hefe-typen der basidiomyceten. Teil I: Schizosaccharomycetales, Protomyces-Typ
71. Ein beitrag zur systematik und entwicklungsbiologie höherer pilze: Hefe-typen der basidiomyceten. Teil III: Ustilago-Typ
72. Ein beitrag zur systematik und entwicklungsbiologie höherer pilze: Hefe-typen der basidiomyceten. Teil IV: Dacrymyces-typ, Tremella-Typ
73. Molecular phylogeny and systematics of the fungi with special reference to the Asco- and Basidiomycota
74. Analysis of cell wall carbohydrates (neutral sugars) from ascomycetous and basidiomycetous yeasts with and without derivatization
75. Phytopathogenic filamentous (Ashbya, Eremothecium) and dimorphic fungi (Holleya, Nematospora) with needle-shaped ascospores as new members within the Saccharomycetaceae
76. The genus Neolecta (Neolectaceae fam. nov., Lecanorales, Ascomycetes) in Canada
77. Phylogenetic relationships of Meliola and Meliolina inferred from nuclear small subunit rRNA sequences
78. A phylogeny of the basidiomycetes
79. Molekulare identifizierung und phylogenetische analyse von endophytischen und latent pathogenen pilzen der weinrebe
80. Galactocandida mastotermitis and G. reticulitermites: Two new ascomycetous yeast species associated with termites
81. Evolutionary relationships of members of the genera Taphrina, Protomyces, Schizosaccharomyces, and related taxa within the archiascomycetes: Integrated analysis of genotypic and phenotypic characters
82. Primary structure of the Neurospora crassa small subunit ribosomal RNA coding region
83. The higher fungi: Their evolutionary relationships and implications for fungal systematics
84. Phylogeny among the basidiomycetous yeasts inferred from small subunit ribosomal DNA sequence
85. Heterogeneity of ubiquinone systems in the genus Sporothrix
86. A phylogenetic study on galactose-containing Candida species based on 18S ribosomal DNA sequences
87. Higher taxa of Basidiomycetes: An 18S rRNA gene perspective
88. Phylogenetic diversity of yeast-producing basidiomycetes
89. Molecular phylogeny of parasitic Zygomycota (Dimargaritales, Zoopagales) based on nuclear small subunit ribosomal DNA sequences
90. Chemotypes of mannose-containing polysaccharides of lichen mycobionts, a possible aid in classification and identification
91. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weigth matrix choice
92. PCR-ribotyping of type isolates of currently accepted Exophiala and Phaeococcomyces species
93. 5S ribosomal RNA sequences from Ascomycetes and evolutionary implications
94. Arxula gen. nov. (Candidaceae), a new anamorphic, arthroconidial yeast genus
95. Methods for the isolation, maintenance, classification, and identification of yeasts
96. Evolutionary relationships among higher fungi inferred by small ribosomal subunit RNA sequence analysis
97. Sequence of the gene for the cytoplasmatic ribosomal RNA small subunit from Candida (Torulopsis) glabrata
98. Holleya gen. nov., an ascosporogenous yeast genus for the Q9-equipped organism whose ascospores are needle-shaped with smooth surfaces on the anterior half and concentric ridges in their posterior half and without appendage
99. Coenzyme Q system in the classification of the ascosporogenous yeast genus Schizosaccharomyces and yeast-like genus Endomyces
100. Coenzyme Q system in the classification of apiculate yeasts in the genera Nadsonia, Saccharomycodes, Hanseniaspora, Kloeckera and Wickerhamia
101. Coenzyme Q system in the classification of some ascosporogenous yeast genera in the families Saccharomycetaceae and Spermophthoraceae
102. Taxonomic significance of the coenzyme Q system in yeasts and yeast-like fungi
103. An emendation of the genus Debaryomyces Lodder et Kruger-Van Rij and the proposals of two new combinations, Debaryomyces carsonii and Debaryomyces etchellsii (Saccharomycetaceae)
104. Taxonomic significance of coenzyme Q system in yeasts and yeast-like fungi (1)
105. Taxonomic significance of the coenzyme Q system in yeasts and yeast-like fungi (2)
106. Coenzyme Q system in the classification of the yeast genera Rhodotorula and Cryptococcus, and the yeast genera Sporobolomyces and Rhodosporídíum
107. The coenzyme Q system in strains of species in the ascosporogenous yeast genera Lipomyces and Waltomyces
108. The coenzyme Q system in strains of Trichosporon species and related organisms
109. Coenzyme Q system in the classification of the ascosporogenous yeast genera Debaryomyces, Saccharomyces, Kluyveromyces, and Endomycopsis
110. The coenzyme Q system in strains of some yeasts and yeast-like fungi
111. Coenzym Q system in the classification of the ascosporogenous yeast genera Hansenula and Pichia
112. A new natural quinone, ubiquinone-5, isolated from an ascosporogenous yeast species Nematospora coryli
113. The coenzyme Q system in strains of species in the genera Stephanoascus and Sporopachyderma (Saccharomycetaceae)
114. Coenzyme Q systems in ascomycetous black yeasts
115. The coenzyme Q system in the classification of the ascosporogenous yeast genus Dekkera and the asporogenous yeast genus Brettanomyces