메뉴 건너뛰기




Volumn 13, Issue 1, 1999, Pages 169-180

Molecular Phylogeny of Truffles (Pezizales: Terfeziaceae, Tuberaceae) Derived from Nuclear rDNA Sequence Analysis

Author keywords

[No Author keywords available]

Indexed keywords

FUNGAL DNA; FUNGAL RNA; PRIMER DNA; RIBOSOME DNA; RNA 18S;

EID: 0033210872     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1006/mpev.1999.0638     Document Type: Article
Times cited : (82)

References (42)
  • 2
    • 0029838290 scopus 로고    scopus 로고
    • Mycorrhizae between black locust (Robinia pseudoacacia) and Terfezia terfezioides
    • Bratek Z., Jakucs E., Bo'ka K., Szedlayu G. Mycorrhizae between black locust (Robinia pseudoacacia) and Terfezia terfezioides. Mycorrhiza. 6:1996;271-174.
    • (1996) Mycorrhiza , vol.6 , pp. 271-174
    • Bratek, Z.1    Jakucs, E.2    Bo'Ka, K.3    Szedlayu, G.4
  • 3
    • 0024967160 scopus 로고
    • Accelerated evolution of a false-truffle from a mushroom ancestor
    • Bruns T. D., Fogel R., White T. J., Palmer J. D. Accelerated evolution of a false-truffle from a mushroom ancestor. Nature. 339:1989;140-142.
    • (1989) Nature , vol.339 , pp. 140-142
    • Bruns, T.D.1    Fogel, R.2    White, T.J.3    Palmer, J.D.4
  • 4
    • 0000465232 scopus 로고
    • Taxonomy and population structure of E-strain mycorrhizal fungi inferred from ribosomal and mitochondrial DNA polymorphisms
    • Egger K. N., Danielson R. M., Fortin J. A. Taxonomy and population structure of E-strain mycorrhizal fungi inferred from ribosomal and mitochondrial DNA polymorphisms. Mycol. Res. 95:1991;866-872.
    • (1991) Mycol. Res. , vol.95 , pp. 866-872
    • Egger, K.N.1    Danielson, R.M.2    Fortin, J.A.3
  • 5
  • 6
    • 0004175019 scopus 로고
    • Distributed by the author, Port Jefferson Station, N.Y.
    • Farris, J. S. 1988, Hennig86. Distributed by the author, Port Jefferson Station, N.Y.
    • (1988) Hennig86
    • Farris, J.S.1
  • 7
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein J. Evolutionary trees from DNA sequences: A maximum likelihood approach. J. Mol. Evol. 17:1981;368-376.
    • (1981) J. Mol. Evol. , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 8
    • 0003437299 scopus 로고
    • Distributed by the author, Department of Genetics, University of Washington, Seattle.
    • Felsenstein, J. 1993, PHYLIP (Phylogeny Inference Package) Ver. 3.5c. Distributed by the author, Department of Genetics, University of Washington, Seattle.
    • (1993) PHYLIP (Phylogeny Inference Package) Ver. 3.5c
    • Felsenstein, J.1
  • 10
    • 0028964818 scopus 로고
    • Phylogeny of discomycetes and early radiations of the apothecial Ascomycotina inferred from SSU rDNA sequence data
    • Gargas A., Taylor J. W. Phylogeny of discomycetes and early radiations of the apothecial Ascomycotina inferred from SSU rDNA sequence data. Exp. Mycol. 19:1995;7-15.
    • (1995) Exp. Mycol. , vol.19 , pp. 7-15
    • Gargas, A.1    Taylor, J.W.2
  • 11
    • 0030968083 scopus 로고    scopus 로고
    • Phylogenetic relationships within Sarcoscypha based upon nucleotide sequences of the internal transcribed spacer of nuclear ribosomal DNA
    • Harrington F. A., Potter D. Phylogenetic relationships within Sarcoscypha based upon nucleotide sequences of the internal transcribed spacer of nuclear ribosomal DNA. Mycologia. 89:1997;258-267.
    • (1997) Mycologia , vol.89 , pp. 258-267
    • Harrington, F.A.1    Potter, D.2
  • 12
    • 0000084234 scopus 로고
    • A framework for the quantitative study of evolutionary trees
    • Hendy M. D., Penny D. A framework for the quantitative study of evolutionary trees. Syst. Zool. 38:1989;297-309.
    • (1989) Syst. Zool. , vol.38 , pp. 297-309
    • Hendy, M.D.1    Penny, D.2
  • 13
    • 0031781544 scopus 로고    scopus 로고
    • Integrating phylogenetic analysis and classification in fungi
    • Hibbett D. S., Donoghue M. J. Integrating phylogenetic analysis and classification in fungi. Mycologia. 90:1998;347-356.
    • (1998) Mycologia , vol.90 , pp. 347-356
    • Hibbett, D.S.1    Donoghue, M.J.2
  • 15
    • 0001392767 scopus 로고
    • Ultrastructural evidence for a phylogenetic linkage of the truffle genus Hydnobolites to the Pezizaceae (Pezizales)
    • Kimbrough J. W., Wu C. G., Gibson J. L. Ultrastructural evidence for a phylogenetic linkage of the truffle genus Hydnobolites to the Pezizaceae (Pezizales). Bot. Gazette. 152:1991;408-420.
    • (1991) Bot. Gazette , vol.152 , pp. 408-420
    • Kimbrough, J.W.1    Wu, C.G.2    Gibson, J.L.3
  • 16
    • 0019296687 scopus 로고
    • A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M. A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:1980;111-120.
    • (1980) J. Mol. Evol. , vol.16 , pp. 111-120
    • Kimura, M.1
  • 17
    • 0029365329 scopus 로고
    • Use of rRNA secondary structure in phylogenetic studies to identify homologous positions: An example of alignment and data presentation from the frogs
    • Kjer K. M. Use of rRNA secondary structure in phylogenetic studies to identify homologous positions: An example of alignment and data presentation from the frogs. Mol. Phylogenet. Evol. 4:1995;314-330.
    • (1995) Mol. Phylogenet. Evol. , vol.4 , pp. 314-330
    • Kjer, K.M.1
  • 18
    • 84963036271 scopus 로고
    • Quantitative phyletics and the evolution of anurans
    • Kluge A. G., Farris J. S. Quantitative phyletics and the evolution of anurans. Syst. Zool. 18:1969;1-32.
    • (1969) Syst. Zool. , vol.18 , pp. 1-32
    • Kluge, A.G.1    Farris, J.S.2
  • 19
    • 0000003052 scopus 로고
    • Relationships of the genus Neolecta (Neolectales ordo nov., Ascomycotina) inferred from 18S rDNA sequences
    • Landvik S., Eriksson O. E., Gargas A., Gustafsson P. Relationships of the genus Neolecta (Neolectales ordo nov., Ascomycotina) inferred from 18S rDNA sequences. Syst. Ascom. 11:1993;107-118.
    • (1993) Syst. Ascom. , vol.11 , pp. 107-118
    • Landvik, S.1    Eriksson, O.E.2    Gargas, A.3    Gustafsson, P.4
  • 20
    • 0030700379 scopus 로고    scopus 로고
    • Towards a subordinal classification of the Pezizales (Ascomycota): Phylogenetic analyses of SSU rDNA sequences
    • Landvik S., Egger K. N., Schumacher T. Towards a subordinal classification of the Pezizales (Ascomycota): Phylogenetic analyses of SSU rDNA sequences. Nord. J. Bot. 17:1997;403-418.
    • (1997) Nord. J. Bot. , vol.17 , pp. 403-418
    • Landvik, S.1    Egger, K.N.2    Schumacher, T.3
  • 21
    • 0000856986 scopus 로고
    • Isolation of DNA from fungal mycelia and single spores
    • M.A. Innis, D.H. Gelfand, J.J. Sninsky, & T.J. White. San Diego: Academic Press
    • Lee S. B., Taylor J. W. Isolation of DNA from fungal mycelia and single spores. Innis M. A., Gelfand D. H., Sninsky J. J., White T. J. PCR Protocols - A Guide to Methods and Applications. 1990;282-287 Academic Press, San Diego.
    • (1990) PCR Protocols - A Guide to Methods and Applications , pp. 282-287
    • Lee, S.B.1    Taylor, J.W.2
  • 22
    • 0006588691 scopus 로고    scopus 로고
    • Species of Ascomycota forming ectomycorrhizae
    • Maia L. C., Yano A. M., Kimbrough J. W. Species of Ascomycota forming ectomycorrhizae. Mycotaxon. 57:1996;371-390.
    • (1996) Mycotaxon , vol.57 , pp. 371-390
    • Maia, L.C.1    Yano, A.M.2    Kimbrough, J.W.3
  • 23
    • 0039955306 scopus 로고
    • Distributed by Matzura Multimedia, Stockholm.
    • Matzura, O. 1995, RNAdraw Ver. 1.1. Distributed by Matzura Multimedia, Stockholm.
    • (1995) RNAdraw Ver. 1.1
    • Matzura, O.1
  • 25
    • 0030988951 scopus 로고    scopus 로고
    • Phylogenetic relationships among ascomycetous truffles and the true and false morels inferred from 18S and 28S ribosomal DNA sequence analysis
    • O'Donnell K., Cigelnik E., Weber N. S., Trappe J. M. Phylogenetic relationships among ascomycetous truffles and the true and false morels inferred from 18S and 28S ribosomal DNA sequence analysis. Mycologia. 89:1997;48-65.
    • (1997) Mycologia , vol.89 , pp. 48-65
    • O'Donnell, K.1    Cigelnik, E.2    Weber, N.S.3    Trappe, J.M.4
  • 26
    • 0027957393 scopus 로고
    • FastDNAml: A tool for construction of phylogenetic trees of DNA sequences using maximum-likelihood
    • Olsen G. J., Matsuda H., Hagstrom R., Overbeek R. fastDNAml: A tool for construction of phylogenetic trees of DNA sequences using maximum-likelihood. Comput. Appl. Biosci. 10:1994;41-48.
    • (1994) Comput. Appl. Biosci. , vol.10 , pp. 41-48
    • Olsen, G.J.1    Matsuda, H.2    Hagstrom, R.3    Overbeek, R.4
  • 27
    • 0023989064 scopus 로고
    • Improved tools for biological sequence analysis
    • Pearson W. R., Lipman D. J. Improved tools for biological sequence analysis. Proc. Natl. Acad. Sci. USA. 85:1988;2444-2448.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 29
    • 0041142340 scopus 로고
    • Ectomycorrhizas in the ecosystem: Structural, functional and community aspects
    • V. Stocchi, P. Bonfante, & M. Nuti. New York: Plenum
    • Read D. J. Ectomycorrhizas in the ecosystem: Structural, functional and community aspects. Stocchi V., Bonfante P., Nuti M. Biotechnology of Ectomycorrhizae - Molecular Approaches. 1995;1-23 Plenum, New York.
    • (1995) Biotechnology of Ectomycorrhizae - Molecular Approaches , pp. 1-23
    • Read, D.J.1
  • 30
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N., Nei M. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:1987;406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 32
    • 0015927177 scopus 로고
    • Generation time and genomic evolution in primates
    • Sarich V. M., Wilson A. C. Generation time and genomic evolution in primates. Science. 179:1973;1144-1147.
    • (1973) Science , vol.179 , pp. 1144-1147
    • Sarich, V.M.1    Wilson, A.C.2
  • 33
    • 0000238844 scopus 로고
    • Ascomal evolution of filamentous ascomycetes: Evidence from molecular data
    • Spatafora J. W. Ascomal evolution of filamentous ascomycetes: Evidence from molecular data. Can. J. Bot. 73:1995;S811-S815.
    • (1995) Can. J. Bot. , vol.73 , pp. 811-S815
    • Spatafora, J.W.1
  • 34
    • 0002335359 scopus 로고
    • The secotioid syndrome
    • Thiers H. D. The secotioid syndrome. Mycologia. 76:1984;1-8.
    • (1984) Mycologia , vol.76 , pp. 1-8
    • Thiers, H.D.1
  • 35
    • 0027968068 scopus 로고
    • CLUSTALW: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice
    • Thompson J. D., Higgins D. G., Gibson T. J. CLUSTALW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:1994;4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 36
    • 0031046929 scopus 로고    scopus 로고
    • Evolutionary distances between nucleotide sequences based on the distribution of substitution rates among sites as estimated by parsimony
    • Tourasse N. J., Gouy M. Evolutionary distances between nucleotide sequences based on the distribution of substitution rates among sites as estimated by parsimony. Mol. Biol. Evol. 14:1997;287-298.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 287-298
    • Tourasse, N.J.1    Gouy, M.2
  • 37
    • 0000582993 scopus 로고
    • The orders, families, and genera of hypogeous Ascomycotina (truffles and their relatives)
    • Trappe J. M. The orders, families, and genera of hypogeous Ascomycotina (truffles and their relatives). Mycotaxon. 9:1979;297-340.
    • (1979) Mycotaxon , vol.9 , pp. 297-340
    • Trappe, J.M.1
  • 39
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • M.A. Innis, D.H. Gelfand, J.J. Sninsky, & T.J. White. San Diego: Academic Press
    • White T. J., Bruns T., Lee S., Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. Innis M. A., Gelfand D. H., Sninsky J. J., White T. J. PCR Protocols - A Guide to Methods and Applications. 1990;315-322 Academic Press, San Diego.
    • (1990) PCR Protocols - A Guide to Methods and Applications , pp. 315-322
    • White, T.J.1    Bruns, T.2    Lee, S.3    Taylor, J.4
  • 40
    • 0041142342 scopus 로고
    • Le specie di Tuberales dell'Emilia Romagna, ecologia e distribuzione
    • Zambonelli A., Morara M. Le specie di Tuberales dell'Emilia Romagna, ecologia e distribuzione. Nat. Montagna. 4:1984;9-32.
    • (1984) Nat. Montagna , vol.4 , pp. 9-32
    • Zambonelli, A.1    Morara, M.2
  • 41
    • 0004632698 scopus 로고
    • Nuclear numbers in Geneaceae and Terfeziaceae ascospores and their taxonomic value
    • Zhang B. C. Nuclear numbers in Geneaceae and Terfeziaceae ascospores and their taxonomic value. Syst. Ascom. 11:1992;31-37.
    • (1992) Syst. Ascom. , vol.11 , pp. 31-37
    • Zhang, B.C.1
  • 42
    • 0028267146 scopus 로고
    • Comparison of models for nucleotide substitution used in maximum-likelihood phylogenetic estimation
    • Yang Z., Goldman N., Friday A. Comparison of models for nucleotide substitution used in maximum-likelihood phylogenetic estimation. Mol. Biol. Evol. 11:1994;316-324.
    • (1994) Mol. Biol. Evol. , vol.11 , pp. 316-324
    • Yang, Z.1    Goldman, N.2    Friday, A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.