RNA footprinting analysis using ion pair reverse phase liquid chromatography

RNA

Volumn 8, Issue 2, 2002, Pages 247-251

  Dickman, Mark J ^a   Conroy, Matthew J ^a   Grasby, Jane A ^a   Hornby, David P ^a  

^a UNIVERSITY OF SHEFFIELD   (United Kingdom)

Author keywords

Chromatography; Hairpin ribozyme; Hydroxyl radical; Reverse phase; RNA footprinting

Indexed keywords

HYDROXYL RADICAL; OLIGONUCLEOTIDE; REAGENT; RIBOZYME; RNA; TETRABUTYLAMMONIUM;

ARTICLE; CHROMATOGRAPHY; CRYSTAL STRUCTURE; ENZYME SUBSTRATE; FLUORESCENCE; HYDROLYSIS; ION PAIR CHROMATOGRAPHY; PRIORITY JOURNAL; REVERSED PHASE HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; RNA FOOTPRINTING; RNA STRUCTURE;

BASE SEQUENCE; CHROMATOGRAPHY, LIQUID; NUCLEIC ACID CONFORMATION; OLIGORIBONUCLEOTIDES; RNA;

EID: 0036219133     PISSN: 13558382     EISSN: None     Source Type: Journal    
DOI: 10.1017/S1355838202012888     Document Type: Article

References (13)

1. Visualizing the higher-order folding of a catalytic RNA molecule
2. Inter-domain cross-linking and molecular modeling of the hairpin ribozyme
3. Structure and function of the hairpin ribozyme
4. A unique mechanism for RNA catalysis: The role of metal cofactors in hairpin ribozyme cleavage
5. The solvent-protected core of the hairpin ribozyme-substrate complex
6. Defining the inside and outside of a catalytic RNA molecule
7. An unusual pH-independent and metal-ion-independent mechanism for hairpin ribozyme catalysis
8. Crystal structure of a hairpin ribozyme-inhibitor complex with implications for catalysis
9. Protein facilitation of group-I intron splicing by assembly of the catalytic core and the 5′-splice-site domain
10. The mechanism of free base formation from DNA by bleomycin - A proposal based on site specific tritium release from poly(dAdU)
11. Metal ions play a passive role in the hairpin ribozyme catalyzed reaction
12. The role of essential pyrimidines in the hairpin ribozyme-catalyzed reaction