Soil on imported shipping containers provides a source of new Pseudomonad biodiversity into New Zealand

New Zealand Journal of Crop and Horticultural Science

Volumn 30, Issue 1, 2002, Pages 19-27

  Godfrey, Scott A C ^a   Marshall, John W ^a  

^a THE NEW ZEALAND INSTITUTE FOR PLANT AND FOOD RESEARCH LIMITED   (New Zealand)

Author keywords

16S rRNA genes; Hypervariable sequence regions; Phylogeny; Pseudomonas; Soil

Indexed keywords

BACTERIAL RNA; RIBOSOME RNA; RNA 16S;

BACTERIUM; INTRODUCED SPECIES; PHYLOGENETICS; SOIL MICROORGANISM;

BACTERIUM ADHERENCE; BACTERIUM ISOLATE; BIODIVERSITY; GENETIC ASSOCIATION; NEW SPECIES; NEW ZEALAND; NUCLEOTIDE SEQUENCE; PHYLOGENY; SHIP; SPECIES INTRODUCTION;

NEW ZEALAND;

PSEUDOMONAS;

EID: 0036112165     PISSN: 01140671     EISSN: None     Source Type: Journal    
DOI: 10.1080/01140671.2002.9514195     Document Type: Article

References (35)

1. Pseudomonas syringae phytotoxins: Mode of action, regulation, and biosynthesis by peptide and polyketide synthetases
2. 16SrRNA gene sequence analysis relative to genomovars of Pseudomonas stutzeri and proposal of Pseudomonas balearica sp. nov.
3. The role of pectic enzymes in plant pathogenesis
4. Intra- and intergeneric similarities of Pseudomonas and Xanthomonas ribosomal ribonucleic acid cistrons
5. Ribosomal ribonucleic acid cistron similarities of phytopathogenic Pseudomonas species
6. Genotypic relationships and taxonomic localization of unclassified Pseudomonas and Pseudomonas-like strains by deoxy-ribonucleic acid:ribosomal ribonucleic acid hybridizations
7. Confidence limits on phylogenies: An approach using the bootstrap
8. The phylogeny of prokaryotes
9. New selective media for enumeration and recovery of fluorescent pseudomonads from various habitats
10. Comparative anatomy of 16S-like ribosomal RNA
11. Microbial evolution, diversity, and ecology: A decade of ribosomal RNA analysis of uncultivated microorganisms
12. Deoxyribonucleic acid similarities among Pseudomonas species
13. Evolution of protein molecules
14. Horizontal gene transfer among group A streptococci: Implications for pathogenesis and epidemiology
15. Two simple media for the demonstration of pyocyanin and fluorescen
16. 16S/23S sequencing
17. An extracellular pectate lysase is the pathogenicity factor of the soft-rotting bacterium Pseudomonas viridaflava
18. The roles of various fractions of Pseudomonas aeruginosa in its pathogenesis: Identity of the lethal toxins produced in vitro and in vivo
19. Bacterial spoilage
20. Deoxyribonucleic acid base composition in the genus Pseudomonas
21. The determination and comparison of the 16S rRNA gene sequences of species of the genus Pseudomonas (sensu stricto) and estimation of the natural intrageneric relationships
22. Compilation of small ribosomal subunit RNA sequences
23. Genus I. Pseudomonas Migula 1894
24. Human and animal-pathogenic pseudomonads
25. Taxonomy of the Pseudomonads
26. Deoxyribo-nucleic acid homologies among some Pseudomonas species
27. Identification of a gene cluster encoding three high-molecular-weight proteins, which is required for synthesis of tolaasin by the mushroom pathogen Pseudomonas tolaasii
28. Genetics of O-antigen biosynthesis in Pseudomonas aeruginosa
29. The neighbor joining method: A new method for reconstructing phylogenetic trees
30. A colour atlas of post-harvest diseases & disorders of fruits and vegetables
31. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
32. TREECON for Windows: A software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment
33. The frequency of chimeric molecules as a consequence of PCR co-amplification of 16S rRNA genes from different bacterial species
34. Detailed higher-order stucture of 16S-like ribosomal ribonucleic acids