Undermethylated DNA as a source of microsatellites from a conifer genome

Genome

Volumn 45, Issue 1, 2002, Pages 91-99

  Zhou, Y ^a   Bui, T ^a   Auckland, L D ^a   Williams, Claire G ^a  

^a TEXAS A AND M UNIVERSITY   (United States)

Author keywords

Gymnosperms; Hypomethylation; Pinus taeda L.; Repetitive DNA; Simple sequence repeats

Indexed keywords

CONIFEROPHYTA; EMBRYOPHYTA; GYMNOSPERMAE; PINUS TAEDA; TRANSPOSONS;

MICROSATELLITE DNA; PLANT DNA;

ARTICLE; DNA METHYLATION; GENE DOSAGE; GENE FREQUENCY; GENE LIBRARY; GENETIC POLYMORPHISM; GENETICS; METABOLISM; PINE;

DNA METHYLATION; DNA, PLANT; GENE DOSAGE; GENE FREQUENCY; GENE LIBRARY; MICROSATELLITE REPEATS; PINUS; POLYMORPHISM, GENETIC;

EID: 0036008823     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/g01-119     Document Type: Article

References (43)

1. Unmethylated CpG islands associated with genes in higher plant DNA
2. Active maize genes are unmodified and flanked by diverse classes of modified, highly repetitive DNA
3. CpG-rich islands and the function of DNA methylation
4. Use of restriction enzymes to study eukaryotic DNA methylation: The methylation pattern in ribosomal DNA from Xenopus laevis
5. Computational and experimental characterization of physically clustered simple sequence repeats in plants
6. Eukaryotic DNA methylation as an evolutionary device
7. An RFLP map for loblolly pine based on a three-generation outbred pedigree
8. A rapid DNA isolation procedure for small quantities of fresh leaf tissue
9. Characterization of microsatellite markers in eastern white pine
10. Survey of microsatellite in pine
11. Microsatellite libraries enriched for several microsatellite sequences in plants
12. Low-copy microsatellite markers for Pinus taeda L.
13. Families of clustered microsatellites in a conifer genome
14. Increasing microsatellite recovery from the conifer genome
15. Characteristics of single- and multi-copy microsatellites from Pinus radiata
16. Maturation in larch. I. Effect of age on shoot growth, foliar characteristics and DNA methylation
17. Sequence specificity of methylation in higher plant DNA
18. Silencing of retrotransposon in Arabidopsis and reactivation by the ddm 1 mutation
19. mCCG methylation in angiosperms
20. Nucleotide distribution in gymnosperm nuclear sequences suggests a model for GC-content change in land-plant nuclear genomes
21. DNA content for Asian pines parallels new world relatives
22. Complex gene families in pine genome
23. Pathological, physiological and evolutionary aspects of short unstable DNA repeats in the human genome
24. Retrotransposon activation followed by rapid repression in introgressed rice plants
25. GT repeats are associated with recombination on human chromosome 22
26. Characterization of the level, target sites and inheritance of cytosine methylation in tomato nuclear DNA
27. Nuclear amounts in gymnosperms
28. Active gene sequences are undermethylated
29. Pinus banksiana has at least seven expressed alcohol dehydrogenase genes in two linked groups
30. Sequence-tagged site (STS) markers of arbitrary genes: Development, characterization and analysis of linkage in black spruce
31. Microsatellite hybrid capture technique for simultaneous isolation of various STR markers
32. Differential methylation of genes and retrotransponsons facilitates shotgun sequencing of the maize genome
33. Organization and function of the McrBC genes of Escherichia coli K-12
34. GENEPOP (version 1. 2): Population genetics software for exact tests and ecumenism
35. Microsatellite repeats are not randomly distributed within Norway spruce (Picea abies K.) expressed sequences
36. Occurrence and inheritance of microsatellites in Pinus radiata
37. An evaluation of the utility of SSR loci as molecular markers in maize (Zea mays L.): Comparisons with data from RFLPs and pedigrees
38. Dependence of McrBC cleavage on distance between recognition elements
39. McrBC: A multisubunit GTP-dependent restriction endonuclease
40. n polymorphisms
41. QTL mapping in outbred pedigrees
42. Cytosine methylation and the ecology of intragenomic parasites
43. Preparation of megabase-size DNA from plant nuclei