메뉴 건너뛰기




Volumn 379, Issue 4-5, 1998, Pages 611-616

Dependence of McrBC cleavage on distance between recognition elements

Author keywords

DNA looping; GTP binding protein; RqlB

Indexed keywords

DNA; RESTRICTION ENDONUCLEASE;

EID: 0031981857     PISSN: 14316730     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Conference Paper
Times cited : (69)

References (32)
  • 1
    • 0025214694 scopus 로고
    • Geometric arrangements of Tn3 resolvase sites
    • Benjamin, H.W., and Cozzarelli, N.R. (1990). Geometric arrangements of Tn3 resolvase sites. J. Biol. Chem. 265, 6441-6447.
    • (1990) J. Biol. Chem. , vol.265 , pp. 6441-6447
    • Benjamin, H.W.1    Cozzarelli, N.R.2
  • 2
    • 0022702354 scopus 로고
    • Structural and catalytic properties of specific complexes between Tn3 resolvase and the recombination site res
    • Boocock, M.R., Brown, J.L., and Sherratt, D.J. (1985). Structural and catalytic properties of specific complexes between Tn3 resolvase and the recombination site res. Biochem. Soc. Trans. 14, 214-216.
    • (1985) Biochem. Soc. Trans. , vol.14 , pp. 214-216
    • Boocock, M.R.1    Brown, J.L.2    Sherratt, D.J.3
  • 3
    • 0026784663 scopus 로고
    • Modified DNA fragments activate NaeI cleavage of refractory DNA sites
    • Conrad, M., and Topal, M.D. (1992). Modified DNA fragments activate NaeI cleavage of refractory DNA sites. Nucleic Acids Res. 20, 5127-5130.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 5127-5130
    • Conrad, M.1    Topal, M.D.2
  • 4
    • 0022447082 scopus 로고
    • Role of DNA topology in Mu transposition: Mechanism of sensing the relative orientation of two DNA segments
    • Craigie, R., and Mizuuchi, K. (1986). Role of DNA topology in Mu transposition: mechanism of sensing the relative orientation of two DNA segments. Cell 45, 795-800.
    • (1986) Cell , vol.45 , pp. 795-800
    • Craigie, R.1    Mizuuchi, K.2
  • 5
    • 0025035727 scopus 로고
    • Genetic and sequence organization of the mcrBC locus of Escherichia coli K-12
    • Dila, D., Sutherland, E., Moran, L., Slatko, B., and Raleigh, E.A. (1990). Genetic and sequence organization of the mcrBC locus of Escherichia coli K-12. J. Bacteriol. 172, 4888-4900.
    • (1990) J. Bacteriol. , vol.172 , pp. 4888-4900
    • Dila, D.1    Sutherland, E.2    Moran, L.3    Slatko, B.4    Raleigh, E.A.5
  • 6
    • 0030582726 scopus 로고    scopus 로고
    • DNA cleavage by the type IC restriction-modification enzyme EcoR124II
    • Dreier, J., MacWilliams, P., and Bickle, T.A. (1996). DNA cleavage by the type IC restriction-modification enzyme EcoR124II. J. Mol. Biol. 264, 722-733.
    • (1996) J. Mol. Biol. , vol.264 , pp. 722-733
    • Dreier, J.1    MacWilliams, P.2    Bickle, T.A.3
  • 7
    • 0021188333 scopus 로고
    • An operator at -280 base pairs that is required for repression of araBAD operon promoter: Addition of DNA helical turns between the operator and promoter cyclically hinders repression
    • Dunn, T.M., Hahn, S., Ogden, S., and Schleif, R.F. (1984). An operator at -280 base pairs that is required for repression of araBAD operon promoter: addition of DNA helical turns between the operator and promoter cyclically hinders repression. Proc. Natl. Acad. Sci. USA 81, 5017-5020.
    • (1984) Proc. Natl. Acad. Sci. USA , vol.81 , pp. 5017-5020
    • Dunn, T.M.1    Hahn, S.2    Ogden, S.3    Schleif, R.F.4
  • 8
    • 0026659283 scopus 로고
    • How Lac repressor finds lac operator in vitro
    • Fickert, R., and Müller-Hill, B. (1992). How Lac repressor finds lac operator in vitro. J. Mol. Biol. 226, 59-68.
    • (1992) J. Mol. Biol. , vol.226 , pp. 59-68
    • Fickert, R.1    Müller-Hill, B.2
  • 9
    • 0026705040 scopus 로고
    • Interaction of EcoRII endonucleae with DNA substrates containing single recognition sites
    • Gabbara, S., and Bhagwat, A.S. (1992). Interaction of EcoRII endonucleae with DNA substrates containing single recognition sites. J. Biol. Chem. 267, 18623-18630.
    • (1992) J. Biol. Chem. , vol.267 , pp. 18623-18630
    • Gabbara, S.1    Bhagwat, A.S.2
  • 10
    • 0030850355 scopus 로고    scopus 로고
    • The recognition of methylated DNA by the GTP-dependent restriction endonuclease McrBC resides in the N-terminal domain of McrB
    • Gast, F.-U., Brinkmann, T., Pieper, U., Krüger, T., Noyer-Weidner, M., and Pingoud, A. (1997). The recognition of methylated DNA by the GTP-dependent restriction endonuclease McrBC resides in the N-terminal domain of McrB. Biol. Chem. 378, 975-982.
    • (1997) Biol. Chem. , vol.378 , pp. 975-982
    • Gast, F.-U.1    Brinkmann, T.2    Pieper, U.3    Krüger, T.4    Noyer-Weidner, M.5    Pingoud, A.6
  • 11
    • 0023121009 scopus 로고
    • Communication between segments of DNA during site-specific recombination
    • Gellert, M., and Nash, H. (1987). Communication between segments of DNA during site-specific recombination. Nature 325, 401-404.
    • (1987) Nature , vol.325 , pp. 401-404
    • Gellert, M.1    Nash, H.2
  • 12
    • 0026752261 scopus 로고
    • A transcriptional enhancer whose function imposes a requirement that proteins track along DNA
    • Herendeen, D.R., Kassavetis, G.A., and Geiduschek, E.P. (1992). A transcriptional enhancer whose function imposes a requirement that proteins track along DNA. Science 256, 1298-1303.
    • (1992) Science , vol.256 , pp. 1298-1303
    • Herendeen, D.R.1    Kassavetis, G.A.2    Geiduschek, E.P.3
  • 13
    • 0029863159 scopus 로고    scopus 로고
    • Surveying a supercoil domain by using the gamma delta resolution system in Salmonella typhimurium
    • Higgins, N.P., Yang, X., Fu, Q., and Roth, J.R. (1996). Surveying a supercoil domain by using the gamma delta resolution system in Salmonella typhimurium. J. Bacteriol. 178, 2825-2835.
    • (1996) J. Bacteriol. , vol.178 , pp. 2825-2835
    • Higgins, N.P.1    Yang, X.2    Fu, Q.3    Roth, J.R.4
  • 14
    • 0022521842 scopus 로고
    • Cooperative binding of λ repressors to sites separated by integral turns of the DNA helix
    • Hochschild, A., and Ptashne, M. (1986). Cooperative binding of λ repressors to sites separated by integral turns of the DNA helix. Cell 44, 681-687.
    • (1986) Cell , vol.44 , pp. 681-687
    • Hochschild, A.1    Ptashne, M.2
  • 15
    • 0020713848 scopus 로고
    • Repressor structure and the mechanism of positive control
    • Hochschild, A., Irwin, N., and Ptashne, M. (1983). Repressor structure and the mechanism of positive control. Cell 32, 319-325.
    • (1983) Cell , vol.32 , pp. 319-325
    • Hochschild, A.1    Irwin, N.2    Ptashne, M.3
  • 17
    • 0024284313 scopus 로고
    • EcoRII can be activated to cleave refractory DNA recognition sites
    • Krüger, D.G., Barcak, G.J., Reuter, M., and Smith, H.O. (1988). EcoRII can be activated to cleave refractory DNA recognition sites. Nucleic Acids Res. 16, 3997-4008.
    • (1988) Nucleic Acids Res. , vol.16 , pp. 3997-4008
    • Krüger, D.G.1    Barcak, G.J.2    Reuter, M.3    Smith, H.O.4
  • 18
    • 0029000684 scopus 로고
    • McrB: A prokaryotic protein specifically recognizing DNA containing modified cytosine residues
    • Krüger, T., Wild, C., and Noyer-Weidner, M. (1995). McrB: a prokaryotic protein specifically recognizing DNA containing modified cytosine residues. EMBO J. 14, 2661-2669.
    • (1995) EMBO J. , vol.14 , pp. 2661-2669
    • Krüger, T.1    Wild, C.2    Noyer-Weidner, M.3
  • 19
    • 0025888264 scopus 로고
    • Efficient site-directed mutagenesis using uracil-containing DNA
    • Kunkel, T.A., Bebenek, K., and McClary, J. (1991). Efficient site-directed mutagenesis using uracil-containing DNA. Methods Enzymol. 204, 125-139.
    • (1991) Methods Enzymol. , vol.204 , pp. 125-139
    • Kunkel, T.A.1    Bebenek, K.2    McClary, J.3
  • 21
    • 0026584744 scopus 로고
    • Type III restriction enzymes need two inversely oriented recognition sites for DNA cleavage
    • Meisel, A., Bickle, T.A., Krüger, D.H., and Schroeder, C. (1992). Type III restriction enzymes need two inversely oriented recognition sites for DNA cleavage. Nature 355, 467-469.
    • (1992) Nature , vol.355 , pp. 467-469
    • Meisel, A.1    Bickle, T.A.2    Krüger, D.H.3    Schroeder, C.4
  • 22
    • 0029045067 scopus 로고
    • Type III restriction endonucleases translocate DNA in a reaction driven by recognition site-specific ATP hydrolysis
    • Meisel, A., Mackeldanz, P., Bickle, T.A., Kruger, D.H., and Schroeder, C. (1995). Type III restriction endonucleases translocate DNA in a reaction driven by recognition site-specific ATP hydrolysis. EMBO J. 14, 2958-2966.
    • (1995) EMBO J. , vol.14 , pp. 2958-2966
    • Meisel, A.1    Mackeldanz, P.2    Bickle, T.A.3    Kruger, D.H.4    Schroeder, C.5
  • 23
    • 0015760410 scopus 로고
    • Restriction of bacteriophage lambda by Escherichia coli K
    • Murray, N.E., Batten, P.L., and Murray, K. (1973). Restriction of bacteriophage lambda by Escherichia coli K. J. Mol. Biol. 81, 395-407.
    • (1973) J. Mol. Biol. , vol.81 , pp. 395-407
    • Murray, N.E.1    Batten, P.L.2    Murray, K.3
  • 24
    • 0030829590 scopus 로고    scopus 로고
    • Characterization of the interaction between the restriction endonuclease McrBC from E. coli and its cofactor GTP
    • Pieper, U., Brinkmann, T., Krüger, T., Noyer-Weidner, M., and Pingoud, A. (1997). Characterization of the interaction between the restriction endonuclease McrBC from E. coli and its cofactor GTP. J. Mol. Biol. 272, 1-10.
    • (1997) J. Mol. Biol. , vol.272 , pp. 1-10
    • Pieper, U.1    Brinkmann, T.2    Krüger, T.3    Noyer-Weidner, M.4    Pingoud, A.5
  • 25
    • 0018362393 scopus 로고
    • Electron microscopic studies of the mechanism of action of the restriction endonuclease of Escherichia coli B
    • Rosamond, J., Endlich, B., and Linn, S. (1979). Electron microscopic studies of the mechanism of action of the restriction endonuclease of Escherichia coli B. J. Mol. Biol. 129, 619-635.
    • (1979) J. Mol. Biol. , vol.129 , pp. 619-635
    • Rosamond, J.1    Endlich, B.2    Linn, S.3
  • 27
    • 0023732866 scopus 로고
    • Model for how type I restriction enzymes select cleavage sites in DNA
    • Studier, F.W., and Bandyopadhyay, P.K. (1988). Model for how type I restriction enzymes select cleavage sites in DNA. Proc. Natl. Acad. Sci., USA 85, 4677-4681.
    • (1988) Proc. Natl. Acad. Sci., USA , vol.85 , pp. 4677-4681
    • Studier, F.W.1    Bandyopadhyay, P.K.2
  • 28
    • 0026634757 scopus 로고
    • McrBC: A multi-subunit GTP-dependent restriction endonuclease
    • Sutherland, E., Coe, L., and Raleigh, E.A. (1992). McrBC: a multi-subunit GTP-dependent restriction endonuclease. J. Mol. Biol. 225, 327-348.
    • (1992) J. Mol. Biol. , vol.225 , pp. 327-348
    • Sutherland, E.1    Coe, L.2    Raleigh, E.A.3
  • 29
    • 0029910629 scopus 로고    scopus 로고
    • Repercussions of DNA tracking by the type IC restriction endonuclease EcoR124I on linear, circular and catenated substrates
    • Szczelkun, M.D., Dillingham, M.S., Janscak, P., Firman, K., and Halford, S.E. (1996). Repercussions of DNA tracking by the type IC restriction endonuclease EcoR124I on linear, circular and catenated substrates. EMBO J. 15, 6335-6347.
    • (1996) EMBO J. , vol.15 , pp. 6335-6347
    • Szczelkun, M.D.1    Dillingham, M.S.2    Janscak, P.3    Firman, K.4    Halford, S.E.5
  • 30
    • 0025801446 scopus 로고
    • NaeI endonucleae binding to pBR322 DNA induces looping
    • Topal, M.D., Thresher, R.J., Conrad, M., and Griffith, J. (1991). NaeI endonucleae binding to pBR322 DNA induces looping. Biochemistry 30, 2006-2010.
    • (1991) Biochemistry , vol.30 , pp. 2006-2010
    • Topal, M.D.1    Thresher, R.J.2    Conrad, M.3    Griffith, J.4
  • 31
    • 0023904316 scopus 로고
    • Action at a distance along a DNA
    • Wang, J.C., and Giaever, G.N. (1988). Action at a distance along a DNA. Science 240, 300-304.
    • (1988) Science , vol.240 , pp. 300-304
    • Wang, J.C.1    Giaever, G.N.2
  • 32
    • 0028988946 scopus 로고
    • The SfiI restriction endonuclease makes a four-strand DNA break at two copies of its recognition sequence
    • Wentzell, L.M., Nobbs, T.J., and Halford, S.E. (1995). The SfiI restriction endonuclease makes a four-strand DNA break at two copies of its recognition sequence. J. Mol. Biol. 248, 581-595.
    • (1995) J. Mol. Biol. , vol.248 , pp. 581-595
    • Wentzell, L.M.1    Nobbs, T.J.2    Halford, S.E.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.