Viscosity dependence of protein dynamics

Proteins: Structure, Function and Genetics

Volumn 42, Issue 3, 2001, Pages 414-421

  Walser, Regula ^a   Van Gunsteren, Wilfred F ^a  

^a ETH ZURICH   (Switzerland)

Author keywords

Molecular dynamics; Protein dynamics; Solvent effect; Viscosity

Indexed keywords

BLOOD CLOTTING FACTOR 10A; SOLVENT;

ARTICLE; CORRELATION FUNCTION; MOLECULAR DYNAMICS; MOLECULAR MODEL; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN SECONDARY STRUCTURE; PROTEIN STRUCTURE; SIMULATION; VISCOSITY;

COMPUTATIONAL BIOLOGY; COMPUTER SIMULATION; FACTOR XA; MODELS, MOLECULAR; PROTEIN CONFORMATION; SOLVENTS; VISCOSITY;

EID: 0035865947     PISSN: 08873585     EISSN: None     Source Type: Journal    
DOI: 10.1002/1097-0134(20010215)42:3<414::AID-PROT110>3.0.CO;2-4     Document Type: Article

References (27)

1. Solvent viscosity and protein dynamics
2. Viscosity scaling and protein dynamics
3. Glassy behavior of a protein
4. Protein dynamics. Comparative investigation on heme-proteins with different physiological roles
5. The role of solvent viscosity in the dynamics of protein conformational changes
6. Conformational relaxation and ligand binding in myoglobin
7. Solvent composition and viscosity effects on the kinetics of CO binding to horse myoglobin
8. Some regularities of dynamic accessibility of buried fluorescent residues to external quenchers in proteins
9. Frictional resistance to the local rotations of fluorophores in protein
10. Viscosity-dependent structural fluctuations in enzyme catalysis
11. Solvent induced conformational kinetics (SICK)
12. Brownian motion in a field of force and the diffusion model of chemical reactions
13. Position-dependent viscosity effects on rate coefficients
14. 2 escape from respiratory proteins as a function of cosolvent molecular weight
15. On the validity of Stokes' law at the molecular level
16. Interaction models for water in relation to protein hydration
17. The GROMOS biomolecular simulation program package
18. X-ray structure of active site-inhibited clotting factor Xa. Implications for drug design and substrate recognition
19. Molecular dynamics with coupling to an external bath
20. Numerical integration of the cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes
21. A generalized reaction field method for molecular dynamics simulations
22. Consistent dielectric properties of the simple point charge and extended simple point charge water models at 277 and 300 K
23. Knowledge-based secondary structure assignment
24. The interpretation of protein structures: Estimation of static accessibility