A Novel Member of the Bacterial-Archaeal Regulator Family Is a Nonspecific DNA-binding Protein and Induces Positive Supercoiling

Journal of Biological Chemistry

Volumn 276, Issue 14, 2001, Pages 10745-10752

  Napoli, Alessandra ^a   Kvaratskelia, Mamuka ^b   White, Malcolm F ^b   Rossi, Mosé ^a   Ciaramella, Maria ^a  

^a INSTITUTE OF PROTEIN BIOCHEMISTRY   (Italy)

^b UNIVERSITY OF ST ANDREWS   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; ENZYMES;

POSITIVE SUPERCOILING;

BACTERIA;

BACTERIAL PROTEIN; DNA BINDING PROTEIN; DNA TOPOISOMERASE (ATP HYDROLYSING); REGULATOR PROTEIN; SMJ12 PROTEIN; UNCLASSIFIED DRUG; ARCHAEAL PROTEIN;

ARCHAEBACTERIUM; ARTICLE; DNA SUPERCOILING; EUBACTERIUM; MOLECULAR STABILITY; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SULFOLOBUS SOLFATARICUS; TRANSCRIPTION REGULATION; AMINO ACID SEQUENCE; CHEMISTRY; CONFORMATION; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; MOLECULAR GENETICS; SULFOLOBUS;

ARCHAEA; BACTERIA (MICROORGANISMS); SULFOLOBUS SOLFATARICUS;

AMINO ACID SEQUENCE; ARCHAEAL PROTEINS; DNA-BINDING PROTEINS; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; SULFOLOBUS;

EID: 0035815657     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M010611200     Document Type: Article

References (59)

1. Bell, S. D., and Jackson, S. P. (1998) Trends Microbiol. 6, 222-228
2. Soppa, J. (1999) Mol. Microbiol. 31, 1295-1305
3. Napoli, A., van der Oost, J., Sensen, C. W., Charlebois, R. L., Rossi, M., and Ciaramella, M. (1999) J. Bacteriol. 181, 1474-1480
4. Bell, S. D., Cairns, S. S., Robson, R. L., and Jackson, S. P. (1999) Mol. Cell 4, 971-982
5. Bell, S. D., and Jackson, S. P. (2000) J. Biol. Chem. 275, 31624-31629
6. Brinkman, A. B., Dahlke, I., Tuininga, J. E., Lammers, T., Dumay, V., de Heus, E., Lebbink, J. H., Thomm, M., de Vos, W. M., and van der Oost, J. (2000) J. Biol. Chem. 275, 38160-38169
7. Enoru-Eta, J., Gigot, D., Thia-Toong, T. L., Glansdorff, N., and Charlier, D. (2000) J. Bacteriol. 182, 3661-3672
8. Reeve, J. N., Sandman, K., and Daniels, C. J. (1997) Cell 89, 999-1002
9. Sandman, K., and Reeve, J. N. (2000) Arch. Microbiol. 17, 165-169
10. Choli, T., Wittmann-Liebold, B., and Reinhardt, R. (1988) J. Biol. Chem. 263, 7087-7093
11. Reddy, T. R., and Suryanarayana, T. (1989) J. Biol. Chem. 264, 17298-17308
12. Kulms, D., Schafer, G., and Hahn, U. (1997) Biol. Chem. 378, 545
13. Mai, V. Q., Chen, X., Hong, R., and Huang, L. (1998) J. Bacteriol. 180, 2560-2563
14. Xue, H., Guo, R. Wen, Y., Liu, D., and Huang, L. (2000) J. Bacteriol. 182, 3929-3933
15. Forterre, P., Confalonieri, F., and Knapp, S. (1999) Mol. Microbiol. 32, 669-670
16. Struhl, K. (1999) Cell 98, 1-4
17. Jones, K. A., and Kadonaga, J. T. (2000) Genes Dev. 14, 1992-1996
18. Kornberg, R. D., and Lorch, Y. (1999) Cell 98, 285-294
19. Newlon, C. S. (1997) Cell 91, 717-720
20. Ridgway, P., and Almouzni, G. (2000) J. Cell Sci. 113, 2647-2658
21. Ritzi, M., and Knippers, R. (2000) Gene 245, 13-20
22. Travers, A. A., Ner, S. S., and Churchill, M. E. A. (1994) Cell 77, 167-169
23. Holmes, V. F., and Cozzarelli, N. R. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 1322-1324
24. Van Komen, S., Petukhova, G., Sigurdsson, S., Stratton, S., and Sung, P. (2000) Cell 6, 563-572
25. Charbonnier, F., and Forterre, P. (1994) J. Bacteriol. 176, 1251-1259
26. Lopez-Garcia, P., and Forterre, P. (1997) Mol. Microbiol. 23, 1267-1279
27. Duguet, M. (1995) in Nucleic Acids and Molecular Biology (Eckstein, F. and Lilley, D. M. J., eds) Vol. 9, pp. 84-114, Springer-Verlag, Berlin
28. Forterre, P., Bergerat, A., and Lopez-Garcia, P. (1996) FEMS Microbiol. Lett. 18, 237-248
29. Bergerat, A., Gadelle, D., and Forterre, P. (1994) J. Biol. Chem. 269, 27663-27669
30. Slesarev, A. I., Stetter, K. O., Lake, J. A., Gellert, M., Krah, R., and Kozyavkin, S. A. (1993) Nature 364, 735-737
31. Lopez-Garcia, P., Knapp, S., Ladenstein, R., and Forterre, P. (1998) Nucleic Acids Res. 26, 2322-2328
32. Kvaratskhelia, M., Wardleworth, B. N., Norman, D. G., and White, M. F. (2000) J. Biol. Chem. 275, 25540-25546
33. Prodromou, C., and Pearl, L. H. (1992) Protein Eng. 5, 827-829
34. Goulet, I., Zivanovic, Y., and Prunell, A. (1987) Nucleic Acids Res. 15, 2803-2821
35. Zivanovic, Y., Goulet, I., Revet, B., Le Bret, M., and Prunell, A. (1988) J. Mol. Biol. 200, 267-290
36. Dennis, P. P. (1997) Cell 89, 1007-1010
37. Bell, S. D., Kosa, P. L., Sigler, P. B., and Jackson, S. P. (1999) Proc. Natl. Acad. Sci. U. S. A. 96, 13662-13667
38. Landgraf, J. R., Wu, J., and Calvo, J. M. (1996) J. Bacteriol. 178, 6930-6936
39. Toulmé, F., Le Cam, E., Teyssier, C., Delain, E., Sautiere, P., Maurizot, J.-C., and Culard, F. (1995) J. Biol. Chem. 270, 6286-6291
40. Baumann, H., Knapp, S., Lundback, T., Ladenstein, R., and Hard, T. (1994) Nat. Struct. Biol. 1, 808-819
41. Ronimus, R. S., and Musgrave, D. (1996) Mol. Microbiol. 20, 77-86
42. Azam, T. A., Iwata, A., Nishimura, A., Ueda, S., and Ishihama, A. (1999) J. Bacteriol. 181, 6361-6370
43. Bates, A. D., and Maxwell, A. (1993) DNA Topology, Rickwood, D. and Hale, D. eds., IRL Press at Oxford University Press, Oxford
44. Calvo, J. M., and Matthews, R. G. (1994) Microbiol. Rev. 58, 466-490
45. Tapias, A., Lopez, G., and Ayora, S. (2000) Nucleic Acids Res. 28, 552-559
46. Beloin, C., Ayora, S., Exley, R., Hirschbein, L., Ogasawara, N., Kasahara, Y., Alonso, J. C., and Hegarat, F. L. (1997) Mol. Gen. Genet. 256, 63-71
47. Zlatanova, J., and van Holde, K. (1998) FASEB J. 12, 421-431
48. Rouviere-Yaniv, J., Yaniv, M., and Germond, J. E. (1979) Cell 17, 265-274
49. Musgrave, D. M., Sandman, K. M., and Reeve, J. N. (1991) Proc. Natl. Acad. Sci U. S. A. 87, 10397-10401
50. Musgrave, D. M., Ferterre, P., and Slesarev, A. (2000) Mol. Microbiol. 35, 341-349
51. Kimura, K., Rybenkov, V. V., Crisona, N. J., Hirano, T., and Cezzarelli, N. R. (1999) Cell 98, 239-248
52. Akhmedov, A. T., Frei, C., Tsai-Pflugfelder, M., Kemper, B., Gasser, S. M., and Jessberger, R. (1998) J. Biol. Chem. 273, 24088-24094
53. Jessberger, R., Riwar, B., Baechtold, H., and Akhmedov, A. T. (1996) EMBO J. 15, 4061-4068
54. Lopez-Garcia, P. (1999) J. Mol. Evol. 49, 439-452
55. Grogan, D. W. (1998) Mol. Microbiol. 28, 1043-1049
56. Seitz, E. M., Brockman, J. P., Sandler, S. J., Clark, A. J., and Kowalczykowski, S. C. (1998) Genes Dev. 12, 1248-1253
57. Kvaratskhelia, M., and White, M. F. (2000) J. Mol. Biol. 297, 923-932
58. Pisani, F. M., De Felice, M., Carpentieri, F., and Rossi, M. (2000) J. Mol. Biol. 301, 61-73
59. Pisani, F. M., De Felice, M., Manco, G., and Rossi, M. (1998) Extremophiles 2, 171-177