High-density fiber optic biosensor arrays

Proceedings of SPIE - The International Society for Optical Engineering

Volumn 4578, Issue , 2001, Pages 89-95

  Epstein, Jason R ^a   Walt, David R ^a  

^a TUFTS UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL MATERIALS; BIOSENSORS; DEPOSITION; DNA; DYES; FLUORESCENCE; MOLECULES; SIGNAL TO NOISE RATIO;

BIOSENSOR ARRAYS; DNA ANALYSIS; DNA DETECTION; HIGH DENSITY FIBER OPTIC BIOSENSOR; MICROSPHERES; OLIGONUCLEOTIDE; SINGLE NUCLEOTIDE POLYMORPHISM;

FIBER OPTIC SENSORS;

EID: 0035776525     PISSN: 0277786X     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1117/12.456107     Document Type: Conference Paper

References (22)

1. Michael, K. L.; Taylor, L. T.; Schultz, S. L.; Walt, D. R., "Randomly Ordered Addressable High-density Optical Sensor Array" Anal. Chem., 70, 1242-1248, 1998.
2. Ferguson, J. A., Steemers, F.J., Walt, D.A., "High Density Fiber Optic DNA Random Microsphere Array" Anal. Chem., 72, 5618-5624, 2000.
3. Walt, D. A. "Bead-based Fiber Optic Arrays" Science, 287, 451-452, 2000.
4. Ferguson, J. A.; Boles, T. C.; Adams, C. P.; Walt, D. R., "A Fiber-Optic DNA Biosensor Microarray for the Analysis of Gene Expression" Nat. Biotech., 14, 1681-1684, 1996.
5. Dickinson, T. A.; Michael, K. M.; Kauer, J. S.; Walt, D. R. "Convergent, Self-encoded Bead Sensor Arrays in the Design of an Artificial Nose" Anal. Chem., 71, 2192-2198, 1999.
6. Pantano, P.; Walt, D. R. "Ordered Nanowell Arrays" Chem. Mater., 8, 2832-2835, 1996.
7. Brown, P. O., Botstein, D., "Exploring the New World of the Genome with DNA Microarrays" Nat. Genet., 21, 33-37, 1999.
8. Schena, M.; Shalon, D.; Davis, R. W.; Brown P. O. "Quantitative Monitoring of Gene Expression Patterns with a Complementary DNA Microarray" Science, 270, 467-70, 1995.
9. Schena, M.; Shalon, D.; Heller, R.; Chai, A. et al. "Parallel Human Genome Analysis" Proc. Natl. Acad. Sci. USA, 93, 10614-10619, 1996.
10. Blanchard, A. P.; Kaiser, R. J.; Hood, L. E., "High-density Oligonucleotide Arrays" Biosens. Bioelectron., 11, 687-690, 1996.
11. Blanchard, A. P.; Friend, S. H., "Cheap DNA Arrays - It's Not All Smoke and Mirrors" Nat. Biotechnol., 17, 953, 1999.
12. Pease, A. C.; Solas, D.; Sullivan, E. J.; Cronin M. T. et al. "Light-generated Oligonucleotide Arrays for Rapid DNA Sequence Analysis" Proc. Natl. Acad. Sci. U. S. A., 91, 5022-6, 1994.
13. Fodor, S. P. A.; Read, J. L.; Pirrung, M. C.; Stryer, L. et al. "Light-directed, Spatially Addressable Parallel Chemical Synthesis" Science, 251, 767-73, 1991.
14. Fodor, S. P. A., "DNA Sequencing: Massively parallel genomics" Science, 277, 393, 395, 1997.
15. Liu, X.; Tan, W. "A Fiber-Optic Evanescent Wave DNA Biosensor Based on Novel Molecular Beacons" Anal. Chem., 71. 5054-5059, 1999.
16. Steemers, F. J.; Ferguson, J. A.; Walt, D. R., "Screening Unlabeled DNA Targets with Randomly-ordered Fiber-Optic Gene Arrays" Nat. Biotechnol., 18, 91-94, 2000.
17. http://www.illumina.com/tech_plat_arrayflex.htm
18. Blattner, F. R.; Plunkett, G., III; Bloch, C. A.; Perna, N., T. et al. "Complete Genome Sequence of Escherichia coli K-12" Science, 277, 1453-1462, 1997.
19. Perna, N. T.; Plunkett, G., III; Burtand, V.; Mau, B. et al. "Genome Sequence of Enterohaemorrhagic Escherichia coli 0157:H7" Nature, 410, 240, 2001.
20. Osborne, M. A.; Furey, W. S.; Klenerman, D.; Balasubramanian, S. "Single-molecule Analysis of DNA Immobilized on Microspheres" Anal. Chem., 72, 3678-3681, 2000.
21. Ma, Y.; Shortreed, M. R.; Yeung, E. S. "High-Throughput Single-Molecule Spectroscopy in Free Solution" Anal. Chem., 72, 4640-4645, 2000.
22. Taylor, J. R.; Fang, M. M.; Nie, S., "Single Probing Specific Sequences on Single DNA Molecules with Bioconjugated Fluorescent Nanoparticles" Anal. Chem., 72, 1979-1986, 2000.