Biochemical and phylogenetic characterization of the dUTPase from the archaeal virus SIRV

Journal of Biological Chemistry

Volumn 273, Issue 11, 1998, Pages 6024-6029

  Prangishvili, David ^a,b   Klenk, Hans Peter ^a,c   Jakobs, Gunnar ^a   Schmiechen, Alexander ^a   Hanselmann, Christine ^a   Holz, Ingelore ^a   Zillig, Wolfram ^a  

^a MAX PLANCK INSTITUTE OF BIOCHEMISTRY   (Germany)

^b INSTITUTE OF PHYSICS   (Georgia)

^c UNIVERSITY OF GÖTTINGEN   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS ENZYME;

ARTICLE; DEAMINATION; ENZYME ACTIVATION; ESCHERICHIA COLI; GENETIC CODE; HUMAN; HUMAN CELL; HYDROLYSIS; MULTIGENE FAMILY; NUCLEOTIDE SEQUENCE; PHYLOGENY; POXVIRUS; PRIORITY JOURNAL; RETROVIRUS; VIRUS;

AMINO ACID SEQUENCE; BACTERIA; BASE SEQUENCE; EUKARYOTIC CELLS; EVOLUTION, MOLECULAR; MOLECULAR SEQUENCE DATA; PHYLOGENY; POXVIRIDAE; PYROPHOSPHATASES; RETROVIRIDAE; SEQUENCE HOMOLOGY, AMINO ACID; SPECIES SPECIFICITY; SULFOLOBUS; VIRUSES;

ARCHAEA; ARCHAEAL VIRUS SIRV; BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; EUKARYOTA; POXVIRIDAE; RETROVIRIDAE; SULFOLOBUS ISLANDICUS; UNIDENTIFIED RETROVIRUS;

EID: 0032513231     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.273.11.6024     Document Type: Article

References (44)

1. Muskhelishvili, G., Karseladze, M., and Prangishvili, D. (1990) Biochemistry (Engl. Transl. Biokhimiya) 55, 517-524
2. O'Donovan, G. A. (1978) in DNA Synthesis (Molineux, M., and Kohyiama, M., eds) pp. 209-232, Plenum Press, New York
3. Beck, C. F., Eisenhardt, A. R., and Neuhard, J. (1975) J. Biol. Chem. 250, 609-616
4. Nyce, G. W., and White, R. H. (1996) J. Bacteriol. 178, 914-916
5. Zillig, W., Kletzin, A., Schleper, C., Holz, I., Janekovic, D., Hain, H., Lanzendörfer, M., and Kristjansson, J. K. (1994) Syst. Appl. Microbiol. 16, 609-628
6. Sonigo, P., Barker, C., Hunter, E., and Wain-Hobson, S. (1986) Cell 45, 375-385
7. Moore, R., Dixon, M., Smith, R., Peters, G., and Dickson, C. (1987) J. Virol. 61, 480-490
8. Querat, G., Audoly, G., Sonigo, P., and Vigne, R. (1990) Virology 175, 434-447
9. York, D. F., Vigne, R., Verwoerd, D. W., and Querat, G. (1992) J. Virol. 66, 4930-4939
10. Andresson, O. S., Elser, J. E., Tobin, G. J., Greenwood, J. D., Gonda, M. A., Georgsson, G., Andresdottir, V., Benediktsdottir, E., Carlsdottir, H. M., Maentylae, E. O., Rafnar, B., Palsson, P. A., Casey, J. W., and Petursson, G. (1993) Virology 193, 89-105
11. Bult, C. J., White, O., Olsen, G. J., Zhou, L., Fleischmann, R. D., Sutton, G. G., Blake, J. A., FitzGerald, L. M., Clayton, R. A., Gocayne, J. D., Kerlavage, A. R., Dougherty, B. A., Tomb, J.-F., Adams, M. D., Reich, C. I., Overbeek, R., Kirkness, E. F., Weinstock, K. G., Merrick, J. M., Glodek, A., Scott, J. L., Geoghagen, N. S. M., Weidman, J. F., Fuhrmann, J. L., Nguyen, D., Utterback, T. R., Kelley, J. M., Peterson, J. D., Sadow, P. W., Hanna, M. C., Cotton, M. D., Roberts, K. M., Hurst, M. A., Kaine, B. P., Borodovsky, M., Klenk, H.-P., Fraser, C. M., Smith, H. O., Woese, C. R., and Venter, J. C. (1996) Science 273, 1058-1073
12. Smith, D. B., and Johnson, K. S. (1988) Gene (Amst.) 67, 31-40
13. Schägger, H., and Von Jagow, G. (1987) Anal. Biochem. 166, 368-379
14. Higgins, D. G., and Sharp, P. M. (1989) Comput. Appl. Biosci. 5, 151-154
15. Felsenstein, J. (1989) Cladistics 5, 164-166
16. Swofford, D. L. (1993) PAUP: Phylogenetic Analysis Using Parsimony, Users Manual, Version 3.1.1., Smithonian Institution, Washington, D. C.
17. Hain, J., Reiter, W.-D., Hüdepohl, U., and Zillig, W. (1992) Nucleic Acids Res. 20, 5423-5428
18. Reiter, W.-D., Palm, P., and Zillig, W. (1988) Nucleic Acids Res. 16, 2445-2459
19. George, D. G., Barker, W. C., and Hunt, L. T. (1986) Nucleic Acids Res. 14, 11-15
20. Kletzin, A. (1992) Nucleic Acids Res. 20, 5389-5396
21. Wang, L., and Weis, B. (1992) J. Bacteriol. 174, 5647-5653
22. Fleischmann, R. D., Adams, M. A., White, O., Clayton, R. A., Kirkness, E. F., Kerlavage, A. R., Bult, C. J., Tomb, J.-F., Dougherty, B. A., Merrick, J. M., McKenney, K., Sutton, G., FitzHug, W., Fields, C., Gocayne, J. D., Scott, J., Shirley, R., Liu, L.-I., Glodek, A., Kelley, J. M., Weidman, J. F., Phillips, C. A., Spriggs, T., Hedblom, E., Cotton, M. D., Utterback, T. R., Hanna, M. C., Nguyen, D. T., Saudek, D. M., Brandon, R. C., Fine, L. D., Fritchman, J. L., Fuhrmann, J. L., Geoghagen, N. S. M., Gnehm, S., McDonald, L. A., Small, K. V., Fraser, C. M., Smith, H. O., and Venter, J. C. (1995) Science 269, 496-511
23. Lundberg, L. G., Thoresson, H. O., Karlstrom, O. H., and Nyman, P. O. (1983) EMBO J. 2, 967-971
24. Shlomai, J., and Kornberg, A. (1978) J. Biol. Chem. 253, 3305-3312
25. Ouzonis, C., Kyrpides, N., and Sander, C. (1995) Nucleic Acids Res. 23, 565-570
26. McIntosh, E. M., Ager, D. D., Gadsden, M. H., and Haynes, R. H. (1992) Proc. Natl. Acad. Sci. U. S. A. 89, 8020-8024
27. Pri-Hadash, A., Hareven, D., and Lifschitz, E. (1992) Plant Cell 4, 149-159
28. Doignon, F., Biteau, N., Aigle, M., and Crouzet, M. (1993) Yeast 9, 1131-1137
29. Mercer, A. A., Fraser, K. M., Stockwell, P. A., and Robinson, A. J. (1989) Virology 172, 665-668
30. Slabaugh, M. B., and Roseman, N. A. (1989) Proc. Natl. Acad. Sci. U. S. A. 86, 4132-4155
31. Shchelkunov, S. N., Blinov, V. M., and Sandakhchiev, L. S. (1993) FEBS Lett. 319, 80-83
32. Massung, R. F., Jayarama, V., and Moyer, R. W. (1993) Virology 197, 511-528
33. Davison, A. J. (1992) Virology 186, 9-14
34. Altschul, S. F., Gish, W., Miller, W., Myers, E. W., and Lipman, D. J. (1990) J. Mol. Biol. 215, 403-410
35. Preston, V. G., and Fischer, F. B. (1984) Virology 138, 58-68
36. Fischer, F. B., and Preston, V. G. (1886) Virology 148, 190-197
37. Köppe, B., Menendez-Arias, L., and Oroszlan, S. (1994) J. Virol. 68, 2313-2319
38. Broyles, S. S. (1993) Virology 195, 863-865
39. Bergman, A.-C., Björnberg, O., Nord, J., Nyman, P. O., and Rosengren, A. M. (1994) Virology 204, 420-424
40. McGeoch, J. (1990) Nucleic Acids Res. 18, 4105-4110
41. Mol, C. D., Harris, J. M., McIntosh, E. M., and Tainer, J. A. (1996) Structure 4, 1077-1092
42. Larsson, G., Svensson, L. A., and Nyman, P. O. (1996) Nat. Struct. Biol. 3, 532-538
43. Cedergren-Zeppezauer, E. S., Larsson, G., Nyman P. O., Dauter, Z., and Wilson, K. S. (1992) Nature 335, 740-743
44. Vertessy, B. (1997) Proteins Struct. Funct. Genet. 28, 568-579