Extremely reduced evolutionary rate of TATA-box binding protein in higher vertebrates and its evolutionary implications

Gene

Volumn 280, Issue 1-2, 2001, Pages 169-173

  Hoshiyama, Daisuke ^a   Kuma, Kei Ichi ^a   Miyata, Takashi ^a  

^a KYOTO UNIVERSITY   (Japan)

Author keywords

Evolution; Functional constraint; House keeping enzyme; Transcription factor

Indexed keywords

COMPLEMENTARY DNA; FRUCTOSE BISPHOSPHATE ALDOLASE; PROTEIN PAX; TATA BINDING PROTEIN; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG;

AMINO ACID SUBSTITUTION; ARTICLE; CONTROLLED STUDY; CYPRINODONTIFORMES; DNA SEQUENCE; EUKARYOTE; GENETIC CODE; GENETIC VARIABILITY; HOUSEKEEPING GENE; LAMPREY; MOLECULAR CLONING; MOLECULAR EVOLUTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SPONGE (PORIFERA); TATA BOX; TRANSCRIPTION INITIATION;

ANIMALS; B-CELL-SPECIFIC ACTIVATOR PROTEIN; DNA, COMPLEMENTARY; DNA-BINDING PROTEINS; EVOLUTION, MOLECULAR; FRUCTOSE-BISPHOSPHATE ALDOLASE; LAMPREYS; MOLECULAR SEQUENCE DATA; ORYZIAS; PHYLOGENY; PORIFERA; SEQUENCE ANALYSIS, DNA; TATA-BOX BINDING PROTEIN; TRANSCRIPTION FACTORS; VERTEBRATES;

EPHYDATIA; EPHYDATIA FLUVIATILIS; EUKARYOTA; LAMPETRA; LETHENTERON REISSNERI; ORYZIAS; ORYZIAS LATIPES; PETROMYZONTIDAE; SPONGILLIDAE; VERTEBRATA;

EID: 0035663926     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(01)00766-1     Document Type: Article

References (30)

1. Zebrafish hox clusters and vertebrate genome evolution
2. Phylogenetic reconstruction of vertebrate Hox cluster duplications
3. Biochemistry and structural biology of transcription factor IID (TFIID)
4. PAX-6 in development and evolution
5. Survey of new data and computer methods of analysis
6. Determinants of substitution rates in mammalian genes: Expression pattern affects selection intensity but not mutation rate
7. Confidence limits on phylogenies: An approach using the bootstrap
8. Progressive sequence alignment as a prerequisite to correct phylogenetic trees
9. Evolution of glycolysis
10. Strong evolutionary conservation of broadly expressed protein isoforms in the troponin I gene family and other vertebrate gene families
11. Sponge Pax cDNA related to Pax-2/5/8 and ancient gene duplications in the Pax family
12. Molecular clock for dating of divergence between animal phyla
13. Evolution of protein molecules
14. Functional constraints against variations on molecules from the tissue level: Slowly evolving brain-specific genes demonstrated by protein kinase and immunoglobulin supergene families
15. Evolution of the vertebrate genome as reflected in paralogous chromosomal regions in man and the house mouse
16. Pax genes and their roles in cell differentiation and development
17. A general method applicable to the search for similarities in the amino acid sequence of two proteins
18. An estimate of divergence time of Parazoa and Eumetazoa and that of Cephalochordata and Vertebrata by aldolase and triose phosphate isomerase clocks
19. Structure of chicken aldolase C mRNA and its expression in the liver and brain during development
20. Protein tyrosine phosphatases from amphioxus, hagfish, and ray: Divergence of tissue-specific isoform genes in the early evolution of vertebrates
21. Ancient large-scale genome duplications: Phylogenetic and linkage analyses shed light on chordate genome evolution
22. Molecular evolution of the genes encoding receptor tyrosine kinase with immunoglobulin like domains
23. The neighbor-joining method: A new method for reconstructing phylogenetic trees
24. Generation time and genomic evolution in primates
25. Vertebrate innovations
26. Pax6 is required for differentiation of glucagon-producing alpha-cells in mouse pancreas
27. PAX genes
28. Protein tyrosine kinase cDNAs from amphioxus, hagfish, and lamprey: Isoform duplications around the divergence of cyclostomes and gnathostomes