A status report on the sequencing and annotation of the P. falciparum genome

Molecular and Biochemical Parasitology

Volumn 118, Issue 2, 2001, Pages 133-138

  Gardner, Malcolm J ^a  

^a J CRAIG VENTER INSTITUTE   (United States)

Author keywords

Chromosome; Genome; Malaria; Plasmodium falciparum

Indexed keywords

MALARIA VACCINE; PROTOZOAL DNA;

AT RICH SEQUENCE; CHROMOSOME; CHROMOSOME ANALYSIS; DATA BASE; EUKARYOTE; GENE FUNCTION; GENE SEQUENCE; HOST PARASITE INTERACTION; HUMAN; MALARIA; MOLECULAR CLONING; MULTIGENE FAMILY; NONHUMAN; PLASMODIUM FALCIPARUM; PRIORITY JOURNAL; REVIEW; SEQUENCE ANALYSIS; SPECIES DIFFERENCE; TRANSPOSON;

ANIMALS; CHROMOSOMES; GENOME, PROTOZOAN; HUMANS; MALARIA, FALCIPARUM; PLASMODIUM FALCIPARUM; SEQUENCE ANALYSIS, DNA;

PLASMODIUM FALCIPARUM;

EID: 0035658991     PISSN: 01666851     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0166-6851(01)00390-5     Document Type: Review

References (37)

1. Whole-genome random sequencing and assembly of Haemophilus influenzae Rd
2. A microbial minimalist
3. A shotgun optical map of the entire Plasmodium falciparum genome
4. Large fragments of Plasmodium falciparum DNA can be stable when cloned in yeast artificial chromosomes
5. Characterization of yeast artificial chromosomes from Plasmodium falciparum: Construction of a stable, representative library and cloning of telomeric DNA fragments
6. Funding for malaria genome sequencing
7. TIGR assembler: A new tool for assembling large shotgun sequencing projects
8. The Plasmodium falciparum genome project: A resource for researchers
9. Current status of the Plasmodium falciparum genome project
10. Toward a high-resolution Plasmodium falciparum linkage map: Polymorphic markers from hundreds of simple sequence repeats
11. Plasmodium falciparum: Assignment of microsatellite markers to chromosomes by PFG-PCR
12. Optical mapping of Plasmodium falciparum chromosome 2
13. The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum
14. Chromosome 2 sequence of the human malaria parasite Plasmodium falciparum
15. Stevor and rif are Plasmodium falciparum multicopy gene families which potentially encode variant antigens
16. Small, clonally variant antigens expressed on the surface of the Plasmodium falciparum-infected erythrocyte are encoded by the rif gene family and are the target of human immune responses
17. Rifins: A second family of clonally variant proteins expressed on the surface of red cells infected with Plasmodium falciparum
18. Nuclear-encoded proteins target to the plastid in Toxoplasma gondii and Plasmodium falciparum
19. PlasmoDB: An integrative database of the Plasmodium falciparum genome. Tools for accessing and analyzing finished and unfinished sequence data
20. Please don't downgrade the sequencers' role
21. Biologists challenge sequencers on parasite genome publication
22. When public-interest science needs solidarity
23. Inhibitors of the nonmevalonate pathway of isoprenoid biosynthesis as antimalarial drugs
24. Apicomplexan parasites possess distinct nuclear-encoded, but apicoplast-localized, plant-type ferredoxin-NADP+ reductase and ferredoxin
25. Characterization of three genes encoding enzymes of the folate biosynthetic pathway in Plasmodium falciparum
26. A bifunctional dihydrofolate synthetase - Folylpolyglutamate synthetase in Plasmodium falciparum identified by functional complementation in yeast and bacteria
27. Happy mapping: Linkage mapping using a physical analogue of meiosis
28. A Happy map of Cryptosporidium parvum
29. The sequence of the human genome
30. Initial sequencing and analysis of the human genome
31. A comparison of the Celera and Ensembl predicted gene sets reveals little overlap in novel genes
32. Interpolated Markov models for eukaryotic gene finding
33. Phat - A gene finding program for Plasmodium falciparum
34. Profiling the malaria genome: A gene survey of three species of malaria parasite with comparison to other apicomplexan species
35. Gene ontology: Tool for the unification of biology
36. Creating the gene ontology resource: Design and implementation
37. Design of a compartmentalized shotgun assembler for the human genome