Amplified single-nucleotide polymorphisms and a (GA)n microsatellite marker reveal genetic differentiation between populations of histoplasma capsulatum from the Americas

Fungal Genetics and Biology

Volumn 34, Issue 1, 2001, Pages 37-48

  Carter, D A ^a   Taylor, J W ^b   Dechairo, B ^a   Burt, A ^b   Koenig, G L ^a   White, T J ^a  

^a ROCHE MOLECULAR SYSTEMS   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Fungal pathogen; Histoplasma capsulatum; Histoplasmosis; Microsatellite; Molecular markers; Population differentiation; SNP; Theta

Indexed keywords

ARTICLE; COLOMBIA; FUNGUS ISOLATION; GENE LOCUS; GENETIC VARIABILITY; GENOTYPE; HISTOPLASMA CAPSULATUM; MICROSATELLITE MARKER; MIGRATION; NONHUMAN; NORTH AMERICA; PHYLOGENY; POPULATION; PRIORITY JOURNAL; SINGLE NUCLEOTIDE POLYMORPHISM; SOUTH AMERICA;

AJELLOMYCES; AJELLOMYCES CAPSULATUS; HISTOPLASMA CAPSULATUM;

EID: 0035573070     PISSN: 10871845     EISSN: None     Source Type: Journal    
DOI: 10.1006/fgbi.2001.1283     Document Type: Article

References (37)

1. Indices of multilocus linkage disequilibrium
2. A safe method of extracting DNA from Coccidioides immitis
3. Molecular markers reveal cryptic sex in the human pathogen Coccidioides immitis
4. Molecular markers reveal differentiation among isolates of Coccidioides immitis from California, Arizona and Texas
5. Clinical isolates of Histoplasma Capsulatum have a recombining population structure
6. A set of electrophoretic molecular markers for strain typing and population genetic studies of Histoplasma capsulatum
7. A test for concordance between the multilocus genealogies of genes and microsatellites in the pathogenic fungus Coccidioides immitis
8. Pathogenic clones versus environmentally driven population increase: Analysis of an epidemic of the human fungal pathogen Coccidioides immitis
9. Histoplasmosis: An illustrative case with unusual vaginal and joint involvement
10. Launching microsatellites: A review of mutation processes and methods of phylogenetic inference
11. Protective efficacy of a 62-kilodalton antigen, HIS-62, from the cell wall and cell membrane of Histoplasma capsulatum yeast cells
12. Colonization of soil by Histoplasma capsulatum: I. Factors affecting its continuity at a given site
13. A critical review of typing methods for Candida albicans and their applications
14. Phylogenetic relationships of varieties and geographical groups of the human pathogenic fungus Histoplasma capsulatum Darling
15. Typing of Histoplasma capsulatum by restriction fragment length polymorphisms in a nuclear gene
16. Diversity among clinical isolates of Histoplasma capsulatum detected by polymerase chain reaction with arbitrary primers
17. Histoplasma capsulatum in the fecal contents and organs of bats in the Canal Zone
18. Concordance of gene genealogies reveals reproductive isolation in the pathogenic fungus Coccidioides immitis
19. Studies on Emmonsiella capsulata (Histoplasma capsulatum)
20. How clonal are bacteria?
21. Estudio micologico del primer caso Argentino de histoplasmosis
22. Species and speciation in mushrooms
23. Large scale production of DNA sequencing templates by microtitre format PCR
24. Temperature-sensitive variants of Histoplasma capsulatum isolated from patients with acquired immunodeficieney syndrome
25. Use of mitochondrial and ribosomal DNA polymorphisms to classify clinical and soil isolates of Histoplasma capsulatum
26. Persistence of initial infection in recurrent Cryptococcus neoformans meningitis
27. Hypervariability of simple sequences as a general source for polymorphic DNA markers
28. The evolutionary biology and population genetics underlying fungal strain typing
29. Phylogenetic species recognition and species concepts in fungi
30. Environmental conditions favoring bat infection with Histoplasma capsulatum in Mexican shelters
31. Histoplasmosis in Colombian bats
32. Are eukaryotic microorganisms clonal or sexual? A population genetics vantage
33. DNA probe for strain typing of Cryptococcus neoformans
34. Ancient and recent patterns of geographic speciation in the oyster mushroom Pleurotus revealed by phylogenetic analysis of ribosomal DNA sequences
35. Classification of Histoplasma capsulatum isolates by restriction fragment polymorphisms