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Volumn 67, Issue 9, 2001, Pages 4084-4090

Heteroduplex Panel Analysis, a Novel Method for Genetic Identification of Aspergillus Section Flavi Strains

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; RIBOSOMAL SPACER DNA; RNA 5.8S;

EID: 0035458410     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.67.9.4084-4090.2001     Document Type: Article
Times cited : (50)

References (26)
  • 1
    • 0027403966 scopus 로고
    • Nuclear magnetic resonance study of a deoxyoligonucleotide duplex containing a three base bulge
    • Aboul-ela, F., A. I. H. Murchie, S. W. Homans, and D. M. J. Lilley. 1993. Nuclear magnetic resonance study of a deoxyoligonucleotide duplex containing a three base bulge. J. Mol. Biol. 229:173-188.
    • (1993) J. Mol. Biol. , vol.229 , pp. 173-188
    • Aboul-ela, F.1    Murchie, A.I.H.2    Homans, S.W.3    Lilley, D.M.J.4
  • 2
    • 0024426629 scopus 로고
    • The contrasting structures of mismatched DNA sequences containing looped-out bases (bulges) and multiple mismatches (bubbles)
    • Bhattacharyya, A., and D. M. J. Lilley. 1989. The contrasting structures of mismatched DNA sequences containing looped-out bases (bulges) and multiple mismatches (bubbles). Nucleic Acids Res. 17:6821-6839.
    • (1989) Nucleic Acids Res. , vol.17 , pp. 6821-6839
    • Bhattacharyya, A.1    Lilley, D.M.J.2
  • 3
    • 0028893676 scopus 로고
    • Sequence variability in homologs of the aflatoxin pathway gene aftR distinguishes species in Aspergillus Section Flavi
    • Chang, P.-K., D. Bhatnagar, T. E. Cleveland, and J. W. Bennett. 1995. Sequence variability in homologs of the aflatoxin pathway gene aftR distinguishes species in Aspergillus Section Flavi. Appl. Environ. Microbiol. 61:40-43.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 40-43
    • Chang, P.-K.1    Bhatnagar, D.2    Cleveland, T.E.3    Bennett, J.W.4
  • 6
    • 0028086863 scopus 로고
    • Relationships among isolates of Aspergillus sect. flavi that vary in aflatoxin production
    • Egel, D. S., P. J. Cotty, and K. S. Elias. 1994. Relationships among isolates of Aspergillus sect. flavi that vary in aflatoxin production. Phytopathology 84:906-912.
    • (1994) Phytopathology , vol.84 , pp. 906-912
    • Egel, D.S.1    Cotty, P.J.2    Elias, K.S.3
  • 8
    • 0027433113 scopus 로고
    • Conformation-sensitive gel electrophoresis for rapid detection of single-base differences in double-stranded PCR products and DNA fragments: Evidence for solvent-induced bends in DNA heteroduplexes
    • Ganguly, A., M. J. Rock, and D. J. Prockop. 1993. Conformation-sensitive gel electrophoresis for rapid detection of single-base differences in double-stranded PCR products and DNA fragments: evidence for solvent-induced bends in DNA heteroduplexes. Proc. Natl. Acad. Sci. USA 90:10325-10329.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 10325-10329
    • Ganguly, A.1    Rock, M.J.2    Prockop, D.J.3
  • 9
    • 0030853698 scopus 로고    scopus 로고
    • Analysis of the internal transcribed spacer regions of ribosomal DNA in common airborne allergenic fungi
    • Gaskell, G. J., D. A. Carter, W. J. Britton, E. R. Tovey, F. H. L. Benyon, and U. Løvborg. 1997. Analysis of the internal transcribed spacer regions of ribosomal DNA in common airborne allergenic fungi. Electrophoresis 18: 1567-1569.
    • (1997) Electrophoresis , vol.18 , pp. 1567-1569
    • Gaskell, G.J.1    Carter, D.A.2    Britton, W.J.3    Tovey, E.R.4    Benyon, F.H.L.5    Løvborg, U.6
  • 10
    • 0031940433 scopus 로고    scopus 로고
    • Cryptic speciation and recombination in the aflatoxin-producing fungus Aspergillus flavus
    • Geiser, D. M., J. I. Pitt, and J. W. Taylor. 1998. Cryptic speciation and recombination in the aflatoxin-producing fungus Aspergillus flavus. Proc. Natl. Acad. Sci. USA 95:388-393.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 388-393
    • Geiser, D.M.1    Pitt, J.I.2    Taylor, J.W.3
  • 11
    • 0030805920 scopus 로고    scopus 로고
    • Physiological and biochemical characterization of Trichoderma harzianum, a biological control agent against soilborne fungal plant pathogens
    • Grondona, I., R. Hermosa, M. Tejada, M. D. Gomis, P. F. Mateos, O. D. Bridge, E. Monte, and L. Garcia-Acha. 1997. Physiological and biochemical characterization of Trichoderma harzianum, a biological control agent against soilborne fungal plant pathogens. Appl. Environ. Microbiol. 63:3189-3198.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 3189-3198
    • Grondona, I.1    Hermosa, R.2    Tejada, M.3    Gomis, M.D.4    Mateos, P.F.5    Bridge, O.D.6    Monte, E.7    Garcia-Acha, L.8
  • 12
    • 0000986969 scopus 로고
    • Ribosomal RNA and fungal systematics
    • Hibbett, D. S. 1992. Ribosomal RNA and fungal systematics. Trans. Mycol. Soc. Jpn. 33:533-556.
    • (1992) Trans. Mycol. Soc. Jpn. , vol.33 , pp. 533-556
    • Hibbett, D.S.1
  • 13
    • 0003812543 scopus 로고    scopus 로고
    • The Europian Bioinformatics Institute, Cambridge, United Kingdom
    • Higgins, D. 1996. Clustal W, version 1.6. The Europian Bioinformatics Institute, Cambridge, United Kingdom.
    • (1996) Clustal W, Version 1.6
    • Higgins, D.1
  • 14
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
    • (1980) J. Mol. Evol. , vol.16 , pp. 111-120
    • Kimura, M.1
  • 15
    • 0001828137 scopus 로고
    • Differentiation of Aspergillus flavus from A. parasiticus and other closely related species
    • Klich, M. A., and J. I. Pitt. 1988. Differentiation of Aspergillus flavus from A. parasiticus and other closely related species. Trans. Br. Mycol. Soc. 91:99-108.
    • (1988) Trans. Br. Mycol. Soc. , vol.91 , pp. 99-108
    • Klich, M.A.1    Pitt, J.I.2
  • 16
    • 0030973692 scopus 로고    scopus 로고
    • Rapid identification of measles virus strains by the heteroduplex mobility assay
    • Kreis, S., and T. Whistler. 1997. Rapid identification of measles virus strains by the heteroduplex mobility assay. Virus Res. 47:197-203.
    • (1997) Virus Res. , vol.47 , pp. 197-203
    • Kreis, S.1    Whistler, T.2
  • 17
    • 0029760862 scopus 로고    scopus 로고
    • Single-strand conformation polymorphism analysis of PCR-amplified ribosomal DNA internal transcribed spacers to differentiate species of Aspergillus Section Flavi
    • Kumeda, Y., and T. Asao. 1996. Single-strand conformation polymorphism analysis of PCR-amplified ribosomal DNA internal transcribed spacers to differentiate species of Aspergillus Section Flavi. Appl. Environ. Microbiol. 62:2947-2952.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 2947-2952
    • Kumeda, Y.1    Asao, T.2
  • 18
    • 0023630597 scopus 로고
    • Aspergillus nomius, a new aflatoxin-producing species related to Aspergillus flavus and Aspergillus tamarii
    • Kurtzman, C. P., B. W. Horn, and C. W. Hesseltine. 1987. Aspergillus nomius, a new aflatoxin-producing species related to Aspergillus flavus and Aspergillus tamarii. Antonie van Leeuwenhoek 53:147-158.
    • (1987) Antonie Van Leeuwenhoek , vol.53 , pp. 147-158
    • Kurtzman, C.P.1    Horn, B.W.2    Hesseltine, C.W.3
  • 19
    • 0032728977 scopus 로고    scopus 로고
    • Identification of Porphyromonas gingivalis strains by heteroduplex analysis and detection of multiple strains
    • Leys, E. J., J. H. Smith, S. R. Lyons, and A. L. Griffen. 1999. Identification of Porphyromonas gingivalis strains by heteroduplex analysis and detection of multiple strains. J. Clin. Microbiol. 37:3906-3911.
    • (1999) J. Clin. Microbiol. , vol.37 , pp. 3906-3911
    • Leys, E.J.1    Smith, J.H.2    Lyons, S.R.3    Griffen, A.L.4
  • 20
    • 0029111762 scopus 로고
    • Kinking of DNA and RNA by base bulges
    • Lilley, D. M. 1995. Kinking of DNA and RNA by base bulges. Proc. Natl. Acad. Sci. USA 92:7140-7142.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 7140-7142
    • Lilley, D.M.1
  • 21
    • 0025364394 scopus 로고
    • Restriction enzyme analysis of mitochondrial DNA of the Aspergillus flavus group: A. flavus, A. parasiticus, and A. nomius
    • Moody, S. F., and B. M. Tyler. 1990. Restriction enzyme analysis of mitochondrial DNA of the Aspergillus flavus group: A. flavus, A. parasiticus, and A. nomius. Appl. Environ. Microbiol. 56:2441-2452.
    • (1990) Appl. Environ. Microbiol. , vol.56 , pp. 2441-2452
    • Moody, S.F.1    Tyler, B.M.2
  • 22
    • 0025289152 scopus 로고
    • Use of nuclear DNA restriction fragment length polymorphisms to analyze the diversity of the Aspergillus flavus group: A. flavus, A. parasiticus, and A. nomius
    • Moody, S. F., and B. M. Tyler. 1990. Use of nuclear DNA restriction fragment length polymorphisms to analyze the diversity of the Aspergillus flavus group: A. flavus, A. parasiticus, and A. nomius. Appl. Environ. Microbiol. 56:2453-2461.
    • (1990) Appl. Environ. Microbiol. , vol.56 , pp. 2453-2461
    • Moody, S.F.1    Tyler, B.M.2
  • 23
    • 0003880355 scopus 로고    scopus 로고
    • Identification of the common food- And airborne fungi
    • Introduction to food- and airborne fungi, 6th ed. Centraalbureau voor Schimmelcultures, Utrecht, The Netherlands
    • Samson, R. A., E. S. Hoekstra, J. C. Frisvad, and O. Filtenborg (ed). 2000. Identification of the common food- and airborne fungi, Aspergillus, p. 64-97. In Introduction to food- and airborne fungi, 6th ed. Centraalbureau voor Schimmelcultures, Utrecht, The Netherlands.
    • (2000) Aspergillus , pp. 64-97
    • Samson, R.A.1    Hoekstra, E.S.2    Frisvad, J.C.3    Filtenborg, O.4
  • 24
    • 0032728575 scopus 로고    scopus 로고
    • rRNA gene internal transcribed spacer 1 and 2 sequences of asexual, anthropophilic, dermatophytes related to Trichophyton rubrum
    • Summerbell, R. C., R. A. Haugland, A. Li, and A. K. Gupta. 1999. rRNA gene internal transcribed spacer 1 and 2 sequences of asexual, anthropophilic, dermatophytes related to Trichophyton rubrum. J. Clin. Microbiol. 37:4005-4011.
    • (1999) J. Clin. Microbiol. , vol.37 , pp. 4005-4011
    • Summerbell, R.C.1    Haugland, R.A.2    Li, A.3    Gupta, A.K.4
  • 25
    • 0029950301 scopus 로고    scopus 로고
    • Discordant groupings of Fusarium spp. from sections Elegans, Liseola and Dlaminia based on ribosomal ITSI and ITS2 sequences
    • Waalwijk, C., J. R. A. de Koning, R. P. Baayen, and W. Gams. 1996. Discordant groupings of Fusarium spp. from sections Elegans, Liseola and Dlaminia based on ribosomal ITSI and ITS2 sequences. Mycologia 88:361-368.
    • (1996) Mycologia , vol.88 , pp. 361-368
    • Waalwijk, C.1    De Koning, J.R.A.2    Baayen, R.P.3    Gams, W.4
  • 26
    • 0029046824 scopus 로고
    • Differentiation of Aspergillus parasiticus from Aspergillus sojae by random amplification of polymorphic DNA
    • Yuan, G.-F., C.-S. Liu, and C.-C. Chen. 1995. Differentiation of Aspergillus parasiticus from Aspergillus sojae by random amplification of polymorphic DNA. Appl. Environ. Microbiol. 61:2384-2387.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 2384-2387
    • Yuan, G.-F.1    Liu, C.-S.2    Chen, C.-C.3


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