Comparisons of gene colinearity in genomes using GeneOrder2.0

Trends in Biochemical Sciences

Volumn 26, Issue 8, 2001, Pages 514-516

  Zafar, Nikhat ^a   Mazumder, Raja ^a   Seto, Donald ^a  

^a GEORGE MASON UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

COMPUTER PROGRAM; DNA SEQUENCE; GENE ORDER; GENE SEQUENCE; GENOME; NONHUMAN; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; SHORT SURVEY;

EID: 0035424580     PISSN: 09680004     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0968-0004(01)01881-3     Document Type: Review

References (20)

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3. Web-based visualization tools for bacterial genome alignments
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6. Genome sequence comparison and scenarios for gene rearrangements: A test case
7. A comparative genomics approach to the evolution of eukaryotes and their mitochondria
8. The complete chloroplast DNA sequence of the green alga Nephroselmis olivacea: Insights into the architecture of ancestral chloroplast genomes
9. The genome of fowlpox virus
10. Extensive gene order differences within regions of conserved synteny between the Fugu and human genomes: Implications for chromosomal evolution and the cloning of disease genes
11. Estimation of synteny conservation and genome compaction between puffer fish (Fugu) and human
12. Analysis of the genetic diversity of Helicobacter pylori: The tale of two genomes
13. The small, the large and the wild: The value of comparison in plant genomics
14. Conservation of gene order: A fingerprint of proteins that physically interact
15. Colinearity and gene density in grass genomes
16. Comparing sequenced segments of the tomato and Arabidopsis genomes: Large-scale duplication followed by selective gene loss creates a network of synteny
17. Protein, nucleotide evolution of gene order and chromosome number in Saccharomyces, Kluyveromyces and related fungi
18. Comparison of whole genome sequences of Chlamydia pneumoniae J138 from Japan and CWL029 from USA
19. Basic local alignment search tool
20. Rapid and sensitive sequence comparison with FASTP and FASTA