Continuous free-flow electrophoresis separation of cytosolic proteins from the human colon carcinoma cell line LIM 1215: A non two-dimensional gel electrophoresis-based proteome analysis strategy

Proteomics

Volumn 1, Issue 7, 2001, Pages 807-818

  Hoffmann, Peter ^a   Ji, Hong ^a   Moritz, Robert L ^a   Connolly, Lisa M ^a   Frecklington, David F ^a   Layton, Meredith J ^a   Eddes, James S ^a   Simpson, Richard J ^a,b  

^a WALTER AND ELIZA HALL INSTITUTE OF MEDICAL RESEARCH   (Australia)

^b ROYAL MELBOURNE HOSPITAL   (Australia)

Author keywords

Colorectal cancer; Free flow electrophoresis; Liquid chromatography mass spectrometry; Protein database; Proteomics

Indexed keywords

PEPTIDE FRAGMENT; PROTEOME; TRYPSIN; TUMOR PROTEIN;

ARTICLE; CELL CULTURE; CHEMISTRY; COLON TUMOR; CYTOSOL; GENETICS; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; HUMAN; ISOELECTRIC FOCUSING; ISOLATION AND PURIFICATION; MASS SPECTROMETRY; METHODOLOGY; TWO DIMENSIONAL GEL ELECTROPHORESIS;

CHROMATOGRAPHY, HIGH PRESSURE LIQUID; COLONIC NEOPLASMS; CYTOSOL; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; HUMANS; ISOELECTRIC FOCUSING; MASS SPECTROMETRY; NEOPLASM PROTEINS; PEPTIDE FRAGMENTS; PROTEOME; TRYPSIN; TUMOR CELLS, CULTURED;

EID: 0035404418     PISSN: 16159853     EISSN: None     Source Type: Journal    
DOI: 10.1002/1615-9861(200107)1:7<807::aid-prot807>3.3.co;2-y     Document Type: Article

References (35)

1. Ji, H., Whitehead, R. H., Reid, G. E., Moritz, R. L., et al., Electrophoresis 1994, 75, 391-405.
2. Ji, H., Baldwin, G. S., Burgess, A. W., Moritz, R. L., et al., J. Biol. Chem. 1993, 268, 13396-13405.
3. Rasmussen, R. K., Ji, H., Eddes, J. S., Moritz, R. L., et al., Electrophoresis 1997, 18, 588-598.
4. Zugaro, L. M., Reid, G. E., Ji, H., Eddes, J. S., et al., Electrophoresis 1998, 19, 867-876.
5. Simpson, R. J., Connolly, L. M., Eddes, J. S., Pereira, J. J., et al., Electrophoresis 2000, 21, 1707-1732.
6. Bier, M., Electrophoresis 1998, 79, 1057-1063.
7. Bier, M., US Patent (4 588 492) 1986.
8. Righetti, P. G., Barzaghi, B., Luzzana, M., Manfredi, G., Faupel, M., J. Biochem. Biophys. Methods 1987, 15, 189-198.
9. Faupel, M., Barzaghi, B., Gelfi, C., Righetti, P. G., J. Biochem. Biophys. Methods 1987, 15, 147-161.
10. Herbert, B., Righetti, P. G., Electrophoresis 2000, 21, 3639-3648.
11. Hannig, K., Electrophoresis 1982, 3, 235-243.
12. Krivankova, L., Bocek, P., Electrophoresis 1998, 19, 1064-1074.
13. Burggraf, D., Weber, G., Lottspeich, F., Electrophoresis 1995, 16, 1010-1015.
14. Weber, G., Bocek, P., Electrophoresis 1996, 17, 1906-1910.
15. Amigorena, S., Drake, J. R., Webster, P., Mellman, I., Nature 1994, 369, 113-120.
16. Davidsson, P., Westman, A., Puchades, M., Nilsson, C. L., Blennow, K., Anal. Chem. 1999, 71, 642-647.
17. Wall, D. B., Kachman, M. T., Gong, S., Hinderer, R., et al., Anal. Chem. 2000, 72, 1099-1111.
18. Bushey, M. M., Jorgenson, J. W., Anal. Chem. 1990, 62, 161-167.
19. Larmann, J. P. J., Lemmo, A. V., Moore, A. W. J., Jorgenson, J. W., Electrophoresis 1993, 14, 439-447.
20. Lemmo, A. V., Jorgenson, J. W., J. Chromatogr. 1993, 633, 213-220.
21. Whitehead, R. H., Macrae, F. A., St.John, D. J., Ma, J., J. Natl. Cancer Inst. 1985, 74, 759-765.
22. Ramsby, M. L., Makowski, G. S., Khairallah, E. A., Electrophoresis 1994, 15, 265-277.
23. Heukeshoven, J., Dernick, R., Electrophoresis 1988, 9, 28-32.
24. Ji, H., Reid, G. E., Moritz, R. L., Eddes, J. S., et al., Electrophoresis 1997, 18, 605-613.
25. Smith, P. K., Krohn, R. I., Hermanson, G. T., Mallia, A. K., et al., Anal. Biochem. 1985, 150, 76-85.
26. Cole, A. R., Ji, H., Simpson, R. J., Electrophoresis 2000, 21, 1772-1781.
27. Moritz, R. L., Eddes, J. S., Reid, G. E., Simpson, R. J., Electrophoresis 1996, 17, 907-917.
28. Moritz, R. L., Simpson, R. J., J. Chromatogr. 1992, 599, 119-130.
29. Moritz, R. L., Reid, G. E., Simpson, R. J., Methods 1994, 6, 213-226.
30. Eng, J. K., McCormack, A. L., Yates, J. R., J. Am. Soc. Mass Spectrom. 1994, 5, 976-989.
31. Bronstein, W. W., Knull, H. R., Can. J. Biochem. 1981, 59, 494-499.
32. Madsen, H. O., Poulsen, K., Dahl, O., Clark, B. F., Hjorth, J. P., Nucleic Acids Res. 1990, 18, 1513-1516.
33. Ward, L. D., Hong, J., Whitehead, R. H., Simpson, R. J., Electrophoresis 1990, 11, 883-891.
34. Ward, L. D., Ji, H., Simpson, R. J., in: Villafranca, J. J. (Ed.), Techniques in Protein Chemistry II, Academic Press, New York 2000, pp. 21-30.
35. Rasmussen, R. K., Ji, H., Eddes, J. S., Zugaro, L. M., et al., Electrophoresis 1998, 19, 818-825.