Chromosomal boundaries in S. cerevisiae

Current Opinion in Genetics and Development

Volumn 11, Issue 2, 2001, Pages 199-204

  Bi, Xin ^a   Broach, James R ^b  

^a UNIVERSITY OF NEBRASKA LINCOLN   (United States)

^b PRINCETON UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

REGULATOR PROTEIN;

BINDING SITE; CHROMATIN; CHROMOSOME; DNA SEQUENCE; FUNGAL GENETICS; GENE EXPRESSION; GENE FUNCTION; GENETIC TRANSCRIPTION; HETEROCHROMATIN; METAZOON; NONHUMAN; NUCLEOSOME; PRIORITY JOURNAL; REVIEW; SACCHAROMYCES CEREVISIAE; SEQUENCE HOMOLOGY;

FUNGI; METAZOA; SACCHAROMYCES CEREVISIAE;

EID: 0035313801     PISSN: 0959437X     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0959-437X(00)00179-9     Document Type: Review

References (38)

1. The boundaries of the silenced HMR domain in Saccharomyces cerevisiae
2. UASrpg can function as a heterochromatin boundary element in yeast
3. Cohabitation of insulators and silencing elements in yeast subtelomeric regions
4. DNA in transcriptionally silent chromatin assumes a distinct topology that is sensitive to cell cycle progression
5. Chromatin domains and boundary elements
6. Chromatin opening and transactivator potentiation by RAP1 in Saccharomyces cerevisiae
7. The telobox, a Myb-related telomeric DNA binding motif found in proteins from yeast, plants and human
8. The rRNA enhancer regulates rRNA transcription in Saccharomyces cerevisiae
9. Organization of the Saccharomyces cerevisiae actin gene UAS: Functional significance of reiterated REB1 binding sites and AT-rich elements
10. Saccharomyces cerevisiae RNA polymerase I terminates transcription at the Reb1 terminator in vivo
11. Chromosomal addresses of the cohesin component, Mcd1p
12. A yeast protein that influences the chromatin structure of UASG and functions as a powerful auxiliary gene activator
13. A transcriptionally active tRNA gene interferes with nucleosome positioning in vivo
14. Visualization of chromosomal domains with boundary element-associated factor BEAF-32
15. The scs′ boundary element: Characterization of boundary element-associated factors
16. The Zw5 protein, a component of the scs chromatin domain boundary, is able to block enhancer-promoter interaction
17. DNA position-specific repression of transcription by a Drosophila zinc finger protein
18. The protein CTCF is required for the enhancer blocking activity of vertebrate insulators
19. CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus
20. Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene
21. Interactions of retrotransposons with the host genome: The case of the gypsy element of Drosophila
22. RAP1: A protean regulator in yeast
23. GCR1, a transcriptional activator in Saccharomyces cerevisiae, complexes with RAP1 and can function without its DNA binding domain
24. Evidence that a complex of SIR proteins interacts with the silencer and telomere-binding protein RAP1
25. A Rap1-interacting protein involved in transcriptional silencing and telomere length regulation
26. A novel Rap1p-interacting factor, Rif2p, cooperates with Rif1p to regulate telomere length in Saccharomyces cerevisiae
27. Identification of high affinity Tbf1p-binding sites within the budding yeast genome
28. tRNA genes as transcriptional repressor elements
29. DNA replication fork pause sites dependent on transcription
30. A 5′ element of the chicken β-globin domain serves as an insulator in human erythroid cells and protects against position effect in Drosophila
31. The activity of the scs and scs′ insulator elements is not dependent on chromosomal context
32. Mutations in aurora prevent centrosome separation leading to the formation of monopolar spindles
33. Are scs and scs′ 'neutral' chromatin domain boundaries of the locus?
34. Silent domains are assembled continuously from the telomere and are defined by promoter distance and strength, and by SIR3 dosage
35. The yeast HML I silencer defines a heterochromatin domain boundary by directional establishment of silencing
36. Spreading of transcriptional repression by SIR3 from telomeric heterochromatin
37. Limitations of silencing at native yeast telomeres
38. Yeast silencers can act as orientation-dependent gene inactivation centers that respond to environmental signals