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Volumn 17, Issue SUPPL. 1, 2001, Pages

Generating protein interaction maps from incomplete data: Application to fold assignment

Author keywords

[No Author keywords available]

Indexed keywords

FUNGAL PROTEIN; PROTEIN;

EID: 0035232248     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/17.suppl_1.S149     Document Type: Article
Times cited : (25)

References (20)
  • 1
    • 0034721164 scopus 로고    scopus 로고
    • Error and attack tolerance of complex networks
    • Albert, R., H. Jeong, et al. (2000) Error and attack tolerance of complex networks. Nature, 406, 378-82.
    • (2000) Nature , vol.406 , pp. 378-382
    • Albert, R.1    Jeong, H.2
  • 2
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSIBLAST: A new generation of protein database search programs
    • Altschul, S. F., T. L. Madden, et al. (1997) Gapped BLAST and PSIBLAST: a new generation of protein database search programs. Nucleic Acids Res., 25, 3389-402.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2
  • 3
    • 0034660322 scopus 로고    scopus 로고
    • Protein Function in the Post-genomic era
    • Eisenberg, D. M., E.M. Xenarios, I. Yeates,T.O. (2000) Protein Function in the Post-genomic era. Nature, 405, 823-826.
    • (2000) Nature , vol.405 , pp. 823-826
    • Eisenberg, D.M.1    Xenarios, E.M.2    Yeates, T.O.I.3
  • 4
    • 0033523989 scopus 로고    scopus 로고
    • Protein interaction maps for complete genomes based on gene fusion events
    • Enright, A. J., I. Iliopoulos, et al. (1999) Protein interaction maps for complete genomes based on gene fusion events Nature, 402, 86-90.
    • (1999) Nature , vol.402 , pp. 86-90
    • Enright, A.J.1    Iliopoulos, I.2
  • 5
    • 0034595516 scopus 로고    scopus 로고
    • Co-evolution of proteins with their interaction partners
    • Goh, C. S., A. A. Bogan, et al. (2000) Co-evolution of proteins with their interaction partners. J. Mol. Biol., 299, 283-93.
    • (2000) J. Mol. Biol. , vol.299 , pp. 283-293
    • Goh, C.S.1    Bogan, A.A.2
  • 6
    • 0033200307 scopus 로고    scopus 로고
    • A systematic comparison of protein structure classifications: SCOP, CATH and FSSP
    • Hadley, C. and D. T. Jones (1999) A systematic comparison of protein structure classifications: SCOP, CATH and FSSP. Structure Fold Des., 7, 1099-112.
    • (1999) Structure Fold Des. , vol.7 , pp. 1099-1112
    • Hadley, C.1    Jones, D.T.2
  • 7
    • 0033832615 scopus 로고    scopus 로고
    • Predicting protein function by genomic context: Quantitative evaluation and qualitative inferences
    • Huynen, M., B. Snel, et al. (2000) Predicting protein function by genomic context: quantitative evaluation and qualitative inferences. Genome Res., 10, 1204-10.
    • (2000) Genome Res. , vol.10 , pp. 1204-1210
    • Huynen, M.1    Snel, B.2
  • 8
    • 0034609791 scopus 로고    scopus 로고
    • The large-scale organization of metabolic networks
    • Jeong, H., B. Tombor, et al. (2000) The large-scale organization of metabolic networks. Nature, 407, 651-4.
    • (2000) Nature , vol.407 , pp. 651-654
    • Jeong, H.1    Tombor, B.2
  • 9
    • 0034027595 scopus 로고    scopus 로고
    • Computational genetics: Finding protein function by nonhomology methods
    • Marcotte, E. M. (2000) Computational genetics: finding protein function by nonhomology methods. Curr. Opin. Struct. Biol., 10, 359-65.
    • (2000) Curr. Opin. Struct. Biol. , vol.10 , pp. 359-365
    • Marcotte, E.M.1
  • 10
    • 0033664385 scopus 로고    scopus 로고
    • Protein networks-built by association
    • Mayer, M. L. and P. Hieter (2000) Protein networks-built by association. Nat. Biotechnol., 18, 1242-3.
    • (2000) Nat. Biotechnol. , vol.18 , pp. 1242-1243
    • Mayer, M.L.1    Hieter, P.2
  • 11
    • 0028961335 scopus 로고
    • SCOP: A structural classification of proteins database for the investigation of sequences and structures
    • Murzin, A. G., S. E. Brenner, et al. (1995) SCOP: a structural classification of proteins database for the investigation of sequences and structures. J. Mol.Biol, 247, 536-40.
    • (1995) J. Mol.Biol , vol.247 , pp. 536-540
    • Murzin, A.G.1    Brenner, S.E.2
  • 12
    • 0030777303 scopus 로고    scopus 로고
    • CATH-a hierarchic classification of protein domain structures
    • Orengo, C. A., A. D. Michie, et al. (1997) CATH-a hierarchic classification of protein domain structures. Structure, 5, 1093-108.
    • (1997) Structure , vol.5 , pp. 1093-1108
    • Orengo, C.A.1    Michie, A.D.2
  • 13
    • 0033977576 scopus 로고    scopus 로고
    • WIT: Integrated system for high-throughput genome sequence analysis and metabolic reconstruction
    • Overbeek, R., N. Larsen, et al. (2000) WIT: integrated system for high-throughput genome sequence analysis and metabolic reconstruction. Nucleic Nucleic Acids Res., 28, 123-5.
    • (2000) Nucleic Nucleic Acids Res. , vol.28 , pp. 123-125
    • Overbeek, R.1    Larsen, N.2
  • 14
    • 0035970298 scopus 로고    scopus 로고
    • Mapping Protein Family Interactions: Intramolecular and Intermolecular Protein Family Interaction Repertoires in the PDB and Yeast
    • Park, J., M. Lappe, et al. (2001) Mapping Protein Family Interactions: Intramolecular and Intermolecular Protein Family Interaction Repertoires in the PDB and Yeast. J. Mol. Biol., 307, 929-938.
    • (2001) J. Mol. Biol. , vol.307 , pp. 929-938
    • Park, J.1    Lappe, M.2
  • 15
    • 0026030641 scopus 로고
    • Database of homology-derived protein structures and the structural meaning of sequence alignment
    • Sander, C. and R. Schneider (1991) Database of homology-derived protein structures and the structural meaning of sequence alignment. Proteins, 9, 56-68.
    • (1991) Proteins , vol.9 , pp. 56-68
    • Sander, C.1    Schneider, R.2
  • 16
    • 0033669189 scopus 로고    scopus 로고
    • A network of protein-protein interactions in yeast
    • Schwikowski, B., P. Uetz, et al. (2000) A network of protein-protein interactions in yeast. Nat. Biotechnol., 18, 1257-61.
    • (2000) Nat. Biotechnol. , vol.18 , pp. 1257-1261
    • Schwikowski, B.1    Uetz, P.2
  • 18
    • 0030660581 scopus 로고    scopus 로고
    • A genomic perspective on protein families
    • Tatusov, R. L., E. V. Koonin, et al. (1997) A genomic perspective on protein families. Science, 278, 631-7.
    • (1997) Science , vol.278 , pp. 631-637
    • Tatusov, R.L.1    Koonin, E.V.2
  • 19
    • 0034062874 scopus 로고    scopus 로고
    • Fast assignment of protein structures to sequences using the intermediate sequence library PDB-ISL
    • Teichmann, S. A., C. Chothia, et al. (2000) Fast assignment of protein structures to sequences using the intermediate sequence library PDB-ISL. Bioinformatics, 16, 117-24.
    • (2000) Bioinformatics , vol.16 , pp. 117-124
    • Teichmann, S.A.1    Chothia, C.2
  • 20
    • 0034747028 scopus 로고    scopus 로고
    • DIP: The Database of Interacting Proteins: 2001 update
    • Xenarios, I., E. Fernandez, et al. (2001) DIP: The Database of Interacting Proteins: 2001 update. Nucleic Acids Res., 29, 239-41.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 239-241
    • Xenarios, I.1    Fernandez, E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.