A rapid classification protocol for the CATH domain database to support structural genomics

Nucleic Acids Research

Volumn 29, Issue 1, 2001, Pages 223-227

  Pearl, Frances M G ^a   Martin, Nigel ^b   Bray, James E ^a   Buchan, Daniel W A ^a   Harrison, Andrew P ^a   Lee, David ^a,b   Reeves, Gabrielle A ^a   Shepherd, Adrian J ^a   Sillitoe, Ian ^a   Todd, Annabel E ^a   Thornton, Janet M ^a,b   Orengo, Christine A ^a  

^a UNIVERSITY COLLEGE LONDON   (United Kingdom)

^b UNIVERSITY OF LONDON   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN;

ALGORITHM; ARTICLE; CLASSIFICATION; CLINICAL PROTOCOL; COMPUTER PROGRAM; DATA BASE; GENE SEQUENCE; GENE STRUCTURE; GENETIC ANALYSIS; INTERNET; MULTIGENE FAMILY; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; STRUCTURE ANALYSIS; VALIDATION PROCESS;

ACRONICTA LEPORINA;

EID: 0035173372     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/29.1.223     Document Type: Article

References (13)

1. The Protein Data Bank
2. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
3. IMPALA: Matching a protein sequence against a collection of PSI-BLAST-constructed position-specific score matrices
4. Protein superfamilies and domain superfolds
5. Assessing annotation transfer for genomics: Quantifying the relationships between protein sequence, structure and function through traditional and probabilistic scores
6. Sequence comparison using multiple sequences detect three times as many remote homologues as pairwise method
7. CATH-A hierarchical classification of protein domain structures
8. Protein structure alignment
9. Fast structure alignment for databank searching
10. Domain assignment for protein structures using a consensus approach: Characterisation and analysis
11. CORA- Topological fingerprints for protein structural families
12. PDBsum: A Web-based database of summaries and analyses of all PDB structures