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Volumn 145, Issue 10, 1999, Pages 2813-2820

Genetic organization and characteristics of the 3-(3-hydroxyphenyl)propionic acid degradation pathway of Comamonas testosteroni TA441

Author keywords

3 (3 hydroxyphenyl)propionate; Biodegradation; Comamonas testosteroni; Meta pathway; Trans 3 hydroxycinnamate

Indexed keywords

ALDEHYDE DEHYDROGENASE; OXYGENASE;

EID: 0032866061     PISSN: 13500872     EISSN: None     Source Type: Journal    
DOI: 10.1099/00221287-145-10-2813     Document Type: Article
Times cited : (45)

References (39)
  • 1
    • 0031733597 scopus 로고    scopus 로고
    • Adaptation of Comamonas testosteroni TA441 to utilize phenol: Organization and regulation of the genes involved in phenol degradation
    • Arai, H., Akahira, S., Ohishi, T., Maeda, M. & Kudo, T. (1998). Adaptation of Comamonas testosteroni TA441 to utilize phenol: organization and regulation of the genes involved in phenol degradation. Microbiology 144, 2895-2903.
    • (1998) Microbiology , vol.144 , pp. 2895-2903
    • Arai, H.1    Akahira, S.2    Ohishi, T.3    Maeda, M.4    Kudo, T.5
  • 2
    • 0030882765 scopus 로고    scopus 로고
    • A 3-(3-hydroxyphenyl)propionic acid catabolic pathway in Rhodococcus globerulus PWD1 : Cloning and characterization of the hpp operon
    • Barnes, M. R., Duetz, W. A. & Williams, P. A. (1997). A 3-(3-hydroxyphenyl)propionic acid catabolic pathway in Rhodococcus globerulus PWD1 : cloning and characterization of the hpp operon. J Bacteriol 179, 6145-6153.
    • (1997) J Bacteriol , vol.179 , pp. 6145-6153
    • Barnes, M.R.1    Duetz, W.A.2    Williams, P.A.3
  • 3
    • 0000283073 scopus 로고
    • The microbial metabolism of cinnamic acid
    • Blakley, E. R. & Simpson, F. J. (1964). The microbial metabolism of cinnamic acid. Can J Microbiol 10, 175-185.
    • (1964) Can J Microbiol , vol.10 , pp. 175-185
    • Blakley, E.R.1    Simpson, F.J.2
  • 4
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford, M. M. (1976). A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72, 248-254.
    • (1976) Anal Biochem , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 6
    • 0020625023 scopus 로고
    • Catabolism of phenylpropionic acid and its 3-hydroxy derivative by Escherichia coli
    • Burlingame, R. & Chapman, P. J. (1983). Catabolism of phenylpropionic acid and its 3-hydroxy derivative by Escherichia coli. J Bacteriol 155, 113-121.
    • (1983) J Bacteriol , vol.155 , pp. 113-121
    • Burlingame, R.1    Chapman, P.J.2
  • 7
    • 85006160523 scopus 로고
    • A gram-positive polychlorinated biphenyl-degrading bacterium, Rhodococcus erythropolis strain TA421, isolated from a termite ecosystem
    • Chung, S.-Y., Maeda, M., Song, E., Horikoshi, K. & Kudo, T. (1994). A gram-positive polychlorinated biphenyl-degrading bacterium, Rhodococcus erythropolis strain TA421, isolated from a termite ecosystem. Biosci Biotechnol Biochem 58, 2111-2113.
    • (1994) Biosci Biotechnol Biochem , vol.58 , pp. 2111-2113
    • Chung, S.-Y.1    Maeda, M.2    Song, E.3    Horikoshi, K.4    Kudo, T.5
  • 8
    • 0027321256 scopus 로고
    • Identification of the transcriptional activator pobr and characterization of its role in the expression of pobA, the structural gene for p-hydroxybenzoate hydroxylase in Acinetobacter calcoaceticus
    • DiMarco, A. A., Averhoff, B. & Ornston, L. N. (1993). Identification of the transcriptional activator pobR and characterization of its role in the expression of pobA, the structural gene for p-hydroxybenzoate hydroxylase in Acinetobacter calcoaceticus. J Bacteriol 175, 4499-4506.
    • (1993) J Bacteriol , vol.175 , pp. 4499-4506
    • DiMarco, A.A.1    Averhoff, B.2    Ornston, L.N.3
  • 9
    • 0029846961 scopus 로고    scopus 로고
    • Evolutionary relationships among extradiol dioxygenases
    • Eltis, L. D. & Bolin, J. T. (1996). Evolutionary relationships among extradiol dioxygenases. J Bacteriol 178, 5930-5937.
    • (1996) J Bacteriol , vol.178 , pp. 5930-5937
    • Eltis, L.D.1    Bolin, J.T.2
  • 10
    • 0027509616 scopus 로고
    • Purification and crystalization of 2,3-dihydroxybiphenyl 1,2-dioxygenase
    • Eltis, L. D., Hofmann, B., Hecht H.-J., Lünsdorf, H. & Timmis, K. N. (1993). Purification and crystalization of 2,3-dihydroxybiphenyl 1,2-dioxygenase. J Biol Chem 268, 2727-2732.
    • (1993) J Biol Chem , vol.268 , pp. 2727-2732
    • Eltis, L.D.1    Hofmann, B.2    Hecht, H.-J.3    Lünsdorf, H.4    Timmis, K.N.5
  • 11
    • 0026766452 scopus 로고
    • Nucleotide sequencing and transcriptional mapping of genes encoding biphenyl dioxygenase, a multicomponent PCB-degrading enzyme in Pseudomonas strain LB400
    • Erickson, B. D. & Mondello, F. J. (1992). Nucleotide sequencing and transcriptional mapping of genes encoding biphenyl dioxygenase, a multicomponent PCB-degrading enzyme in Pseudomonas strain LB400. J Bacteriol 174, 2903-2912.
    • (1992) J Bacteriol , vol.174 , pp. 2903-2912
    • Erickson, B.D.1    Mondello, F.J.2
  • 12
    • 0030948489 scopus 로고    scopus 로고
    • Genetic characterization and expression in heterologous hosts of the 3-(3-hydroxyphenyl)propionate catabolic pathway of Escherichia coli K-12
    • Ferrández, A., García, J. L. & Díaz, E. (1997). Genetic characterization and expression in heterologous hosts of the 3-(3-hydroxyphenyl)propionate catabolic pathway of Escherichia coli K-12. J Bacteriol 179, 2573-2581.
    • (1997) J Bacteriol , vol.179 , pp. 2573-2581
    • Ferrández, A.1    García, J.L.2    Díaz, E.3
  • 13
    • 0023374169 scopus 로고
    • Organization and nucleotide sequence determination of a gene cluster involved in 3-chlorocatechol degradation
    • Frantz, B. & Chakrabarty, A. M. (1987). Organization and nucleotide sequence determination of a gene cluster involved in 3-chlorocatechol degradation. Proc Natl Acad Sci USA 84, 4460-4464.
    • (1987) Proc Natl Acad Sci USA , vol.84 , pp. 4460-4464
    • Frantz, B.1    Chakrabarty, A.M.2
  • 14
    • 0025318026 scopus 로고
    • The meta cleavage operon of TOL degradative plasmid pWWO comprises 13 genes
    • Harayama, S. & Rekik, M. (1990). The meta cleavage operon of TOL degradative plasmid pWWO comprises 13 genes. Mol Gen Genet 221, 113-120.
    • (1990) Mol Gen Genet , vol.221 , pp. 113-120
    • Harayama, S.1    Rekik, M.2
  • 15
    • 0028172818 scopus 로고
    • Identification of the pcaRKF gene cluster from Pseudomonas putida: Involvement in chemotaxis, biodegradation, and transport of 4-hydroxybenzoate
    • Harwood, C. S., Nichols, N. N., Kim, M. K., Ditty, J. L. & Parales, R. E. (1994). Identification of the pcaRKF gene cluster from Pseudomonas putida: involvement in chemotaxis, biodegradation, and transport of 4-hydroxybenzoate. J Bacteriol 176, 6479-6488.
    • (1994) J Bacteriol , vol.176 , pp. 6479-6488
    • Harwood, C.S.1    Nichols, N.N.2    Kim, M.K.3    Ditty, J.L.4    Parales, R.E.5
  • 16
    • 0028287911 scopus 로고
    • The biphenyl/ polychlorinated biphenyl-degradation locus (bph) of Pseudomonas sp. LB400 encodes four additional metabolic enzymes
    • Hofer, B., Backhaus, S. & Timmis, K. N. (1994). The biphenyl/ polychlorinated biphenyl-degradation locus (bph) of Pseudomonas sp. LB400 encodes four additional metabolic enzymes. Gene 144, 9-16.
    • (1994) Gene , vol.144 , pp. 9-16
    • Hofer, B.1    Backhaus, S.2    Timmis, K.N.3
  • 17
    • 0027198281 scopus 로고
    • Genetic analysis of a pseudomonas locus encoding a pathway for biphenyl/polychlorinated biphenyl degradation
    • Hofer, B., Eltis, L. D., Dowling, D. N. & Timmis, K. N. (1993). Genetic analysis of a Pseudomonas locus encoding a pathway for biphenyl/polychlorinated biphenyl degradation. Gene 130, 47-55.
    • (1993) Gene , vol.130 , pp. 47-55
    • Hofer, B.1    Eltis, L.D.2    Dowling, D.N.3    Timmis, K.N.4
  • 18
    • 0022622043 scopus 로고
    • Nucleotide sequence of a DNA segment promoting transcription in Pseudomonas putida
    • Inouye, S., Asai, Y., Nakazawa, A. & Nakazawa, T. (1986). Nucleotide sequence of a DNA segment promoting transcription in Pseudomonas putida. J Bacteriol 166, 739-745.
    • (1986) J Bacteriol , vol.166 , pp. 739-745
    • Inouye, S.1    Asai, Y.2    Nakazawa, A.3    Nakazawa, T.4
  • 19
    • 0028040511 scopus 로고
    • Contrasting patterns of evolutionary divergence within the Acinetobacter calcoaceticus pca operon
    • Kowalchuk, G. A., Hartnett G. B., Benson, A., Houghton, J. E., Ngai, K.-L. & Ornston, L. N. (1994). Contrasting patterns of evolutionary divergence within the Acinetobacter calcoaceticus pca operon. Gene 146, 23-30.
    • (1994) Gene , vol.146 , pp. 23-30
    • Kowalchuk, G.A.1    Hartnett, G.B.2    Benson, A.3    Houghton, J.E.4    Ngai, K.-L.5    Ornston, L.N.6
  • 20
    • 0031977177 scopus 로고    scopus 로고
    • Cloning of new Rhodococcus extradiol dioxygenase genes and study of their distribution in different Rhodococcus strains
    • Kulakov, L. A., Delcroix, V. A., Larkin, M. J., Ksenzenko, V. N. & Kulakova, A. N. (1998). Cloning of new Rhodococcus extradiol dioxygenase genes and study of their distribution in different Rhodococcus strains. Microbiology 144, 955-963.
    • (1998) Microbiology , vol.144 , pp. 955-963
    • Kulakov, L.A.1    Delcroix, V.A.2    Larkin, M.J.3    Ksenzenko, V.N.4    Kulakova, A.N.5
  • 21
    • 0027968260 scopus 로고
    • Sequence and expression of the tod GIH genes involved in the last three steps of toluene degradation by Pseudomonas putida F1
    • Lau, P. C. K., Bergeron, H., Labbe, D., Wang, Y., Brousseau, R. & Gibson, D. T. (1994). Sequence and expression of the tod GIH genes involved in the last three steps of toluene degradation by Pseudomonas putida F1. Gene 146, 7-13.
    • (1994) Gene , vol.146 , pp. 7-13
    • Lau, P.C.K.1    Bergeron, H.2    Labbe, D.3    Wang, Y.4    Brousseau, R.5    Gibson, D.T.6
  • 22
    • 0032570608 scopus 로고    scopus 로고
    • Characterisation of the urease gene cluster in Bordetella bronchiseptica
    • McMillan, D. J., Mau, M. & Walker, M. J. (1998). Characterisation of the urease gene cluster in Bordetella bronchiseptica. Gene 208, 243-251.
    • (1998) Gene , vol.208 , pp. 243-251
    • McMillan, D.J.1    Mau, M.2    Walker, M.J.3
  • 23
    • 0028797047 scopus 로고
    • Multiple genes encoding 2,3-dihydroxybiphenyl 1,2-dioxygenase in the gram-positive polychlorinated biphenyl-degrading bacterium Rhodococcus erythropolis TA421, isolated from a termite ecosystem
    • Maeda, M., Chung, S. Y., Song, E. & Kudo, T. (1995). Multiple genes encoding 2,3-dihydroxybiphenyl 1,2-dioxygenase in the gram-positive polychlorinated biphenyl-degrading bacterium Rhodococcus erythropolis TA421, isolated from a termite ecosystem. Appl Environ Microbiol 61, 549-555.
    • (1995) Appl Environ Microbiol , vol.61 , pp. 549-555
    • Maeda, M.1    Chung, S.Y.2    Song, E.3    Kudo, T.4
  • 24
    • 0025806414 scopus 로고
    • Sequence analysis of the Pseudomonas sp. strain P51 tcb gene cluster, which encodes metabolism of chlorinated catechols: Evidence for specialization of catechol 1,2-dioxygenases for chlorinated substrates
    • van der Meer, J. R., Eggen, R. I., Zehnder, A. J. & de Vos, W. M. (1991). Sequence analysis of the Pseudomonas sp. strain P51 tcb gene cluster, which encodes metabolism of chlorinated catechols: evidence for specialization of catechol 1,2-dioxygenases for chlorinated substrates. J Bacteriol 173, 2425-2434.
    • (1991) J Bacteriol , vol.173 , pp. 2425-2434
    • Meer, J.R.1    Eggen, R.I.2    Zehnder, A.J.3    De Vos, W.M.4
  • 25
    • 0030955228 scopus 로고    scopus 로고
    • Testosterone-regulated expression of enzymes involved in steroid and aromatic hydrocarbon catabolism in Comamonas testosteroni
    • Möbus, E., Jahn, M., Schmid, R., Jahn, D. & Maser, E. (1997). Testosterone-regulated expression of enzymes involved in steroid and aromatic hydrocarbon catabolism in Comamonas testosteroni. J Bacteriol 179, 5951-5955.
    • (1997) J Bacteriol , vol.179 , pp. 5951-5955
    • Möbus, E.1    Jahn, M.2    Schmid, R.3    Jahn, D.4    Maser, E.5
  • 26
    • 0025271597 scopus 로고
    • Molecular cloning of the protocatechuate 4,5-dioxygenase genes of Pseudomonas paucimobilis
    • Noda, Y., Nishikawa, S., Shiozuka, K. & 7 other authors (1990). Molecular cloning of the protocatechuate 4,5-dioxygenase genes of Pseudomonas paucimobilis. J Bacteriol 172, 2704-2709.
    • (1990) J Bacteriol , vol.172 , pp. 2704-2709
    • Noda, Y.1    Nishikawa, S.2    Shiozuka, K.3
  • 27
    • 0025815712 scopus 로고
    • Sequence of the gene (pheA) encoding phenol monooxygenase from Pseudomonas sp. EST1001: Expression in Escherichia coli and Pseudomonas putida
    • Nurk, A., Kasak, L. & Kivisaar, M. (1991). Sequence of the gene (pheA) encoding phenol monooxygenase from Pseudomonas sp. EST1001: expression in Escherichia coli and Pseudomonas putida. Gene 102, 13-18.
    • (1991) Gene , vol.102 , pp. 13-18
    • Nurk, A.1    Kasak, L.2    Kivisaar, M.3
  • 28
    • 0025357079 scopus 로고
    • Organization and sequence analysis of the 2,4-dichlorophenol hydroxylase and dichlorocatechol oxidative operons of plasmid pJP4
    • Perkins, E. J., Gordon, M. P., Caceres, O. & Lurquin, P. F. (1990). Organization and sequence analysis of the 2,4-dichlorophenol hydroxylase and dichlorocatechol oxidative operons of plasmid pJP4. J Bacteriol 172, 2351-2359.
    • (1990) J Bacteriol , vol.172 , pp. 2351-2359
    • Perkins, E.J.1    Gordon, M.P.2    Caceres, O.3    Lurquin, P.F.4
  • 29
    • 0030029182 scopus 로고    scopus 로고
    • Molecular characterization of the 4-hydroxyphenylacetate catabolic pathway of Escherichia coli W: Engineering a mobile aromatic degradative cluster
    • Prieto, M. A., Díaz, E. & García. J. L. (1996). Molecular characterization of the 4-hydroxyphenylacetate catabolic pathway of Escherichia coli W: engineering a mobile aromatic degradative cluster. J Bacteriol 178, 111-120.
    • (1996) J Bacteriol , vol.178 , pp. 111-120
    • Prieto, M.A.1    Díaz, E.2    García, J.L.3
  • 30
    • 0025115933 scopus 로고
    • Subcloning and nucleotide sequence of the 3,4-dihydroxyphenylacetate (homoprotocatechuate) 2,3-dioxygenase gene from Escherichia coli C
    • Roper, D. I. & Cooper, R. A. (1990). Subcloning and nucleotide sequence of the 3,4-dihydroxyphenylacetate (homoprotocatechuate) 2,3-dioxygenase gene from Escherichia coli C. FEBS Lett 275, 53-57.
    • (1990) FEBS Lett , vol.275 , pp. 53-57
    • Roper, D.I.1    Cooper, R.A.2
  • 31
    • 0028958247 scopus 로고
    • Sequence of the hpcC and hpcG genes of the meta-fission homoprotocatechuic acid pathway of Escherichia coli C: Nearly 40% amino-acid identity with the analogous enzymes of the catechol pathway
    • Roper, D. I., Stringfellow, J. M. & Cooper, R. A. (1995). Sequence of the hpcC and hpcG genes of the meta-fission homoprotocatechuic acid pathway of Escherichia coli C: nearly 40% amino-acid identity with the analogous enzymes of the catechol pathway. Gene 156, 47-51.
    • (1995) Gene , vol.156 , pp. 47-51
    • Roper, D.I.1    Stringfellow, J.M.2    Cooper, R.A.3
  • 32
    • 0030198501 scopus 로고    scopus 로고
    • Characterization and distribution of tartrate utilization genes in the grapevine pathogen Agrobacterium vitis
    • Salomone, J.-Y., Crouzet, P., De Ruffray, P. & Otten, L. (1996). Characterization and distribution of tartrate utilization genes in the grapevine pathogen Agrobacterium vitis. Mol Plant Microbe Interact 9, 401-408.
    • (1996) Mol Plant Microbe Interact , vol.9 , pp. 401-408
    • Salomone, J.-Y.1    Crouzet, P.2    De Ruffray, P.3    Otten, L.4
  • 34
    • 0026567783 scopus 로고
    • Nucleotide sequence and functional analysis of the complete phenol/3,4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600
    • Shingler, V., Powlowski, J. & Marklund, U. (1992). Nucleotide sequence and functional analysis of the complete phenol/3,4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600. J Bacteriol 174, 711-724.
    • (1992) J Bacteriol , vol.174 , pp. 711-724
    • Shingler, V.1    Powlowski, J.2    Marklund, U.3
  • 35
    • 0021205685 scopus 로고
    • High frequency mobilization of gram-negative bacterial replicons by the in vitro constructed Tn5-Mob transposon
    • Simon, R. (1984). High frequency mobilization of gram-negative bacterial replicons by the in vitro constructed Tn5-Mob transposon. Mol Gen Genet 196, 413-420.
    • (1984) Mol Gen Genet , vol.196 , pp. 413-420
    • Simon, R.1
  • 36
    • 0029789393 scopus 로고    scopus 로고
    • Catechol dioxygenases from Escherichia coli (MhpB) and Alcaligenes eutrophus (MpcI): Sequence analysis and biochemical properties of a third family of extradiol dioxygenases
    • Spence, E. L., Kawamukai, M., Sanvoisin, J., Braven, H. & Bugg, T. D. (1996). Catechol dioxygenases from Escherichia coli (MhpB) and Alcaligenes eutrophus (MpcI): sequence analysis and biochemical properties of a third family of extradiol dioxygenases. J Bacteriol 178, 5249-5256.
    • (1996) J Bacteriol , vol.178 , pp. 5249-5256
    • Spence, E.L.1    Kawamukai, M.2    Sanvoisin, J.3    Braven, H.4    Bugg, T.D.5
  • 37
    • 0023119345 scopus 로고
    • Reclassification of pseudomonas acidovorans den dooren de jong 1926 and pseudomonas testosteroni marcus and talalay 1956 as comamonas acidovorans comb. nov. and comamonas testosteroni comb, nov., with an emended description of the genus comamonas
    • Tamaoka, J., Ha, D.-M. & Komagata, K. (1987). Reclassification of Pseudomonas acidovorans den Dooren de Jong 1926 and Pseudomonas testosteroni Marcus and Talalay 1956 as Comamonas acidovorans comb. nov. and Comamonas testosteroni comb, nov., with an emended description of the genus Comamonas. Int J Syst Bacteriol 37, 52-59.
    • (1987) Int J Syst Bacteriol , vol.37 , pp. 52-59
    • Tamaoka, J.1    Ha, D.-M.2    Komagata, K.3
  • 38
    • 0028840131 scopus 로고
    • Metabolic pathway for biosynthesis of poly(3-hydroxybutyrate-co-4-hydroxybutyrate) from 4-hydroxybutyrate by Alcaligenes eutrophus
    • Valentin, H. E., Zwingmann, G., Schonebaum, A. & Steinbuchel, A. (1995). Metabolic pathway for biosynthesis of poly(3-hydroxybutyrate-co-4-hydroxybutyrate) from 4-hydroxybutyrate by Alcaligenes eutrophus. Eur J Biochem 227, 43-60.
    • (1995) Eur J Biochem , vol.227 , pp. 43-60
    • Valentin, H.E.1    Zwingmann, G.2    Schonebaum, A.3    Steinbuchel, A.4
  • 39
    • 0024427069 scopus 로고
    • Toluene degradation by Pseudomonas putida F1. Nucleotide sequence of the todC1C2-BADE genes and their expression in Escherichia coli
    • Zylstra, G. J. & Gibson, D. T. (1989). Toluene degradation by Pseudomonas putida F1. Nucleotide sequence of the todC1C2-BADE genes and their expression in Escherichia coli. J Biol Chem 264, 14940-14946.
    • (1989) J Biol Chem , vol.264 , pp. 14940-14946
    • Zylstra, G.J.1    Gibson, D.T.2


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