Molecular evolution of the small subunit ribosomal DNA in woodlice (crustacea, isopoda, oniscidea) and implications for oniscidean phylogeny

Molecular Phylogenetics and Evolution

Volumn 18, Issue 1, 2001, Pages 54-65

  Mattern, Dirk ^a   Schlegel, Martin ^a  

^a UNIVERSITY OF LEIPZIG   (Germany)

Author keywords

Crustacea; Molecular phylogeny; Oniscidea; Ssu rDNA

Indexed keywords

CUBARIS MURINA; LIGIDIUM HYPNORUM;

EID: 0035155046     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1006/mpev.2000.0861     Document Type: Article

References (70)

1. Phylogeny of selected maxillopodan and other crustacean taxa based on 18S ribosomal nucleotide sequences: A preliminary analysis
2. Limitations of metazoan 18S rRNA sequence data: Implications for reconstructing a phylogeny of the animal kingdom and inferring the reality of the Cambrian explosion
3. A phylogenetic analysis of the Isopoda with some classificatory recommendations
4. Evolutionary origin of whiteflies (Hemiptera: Stenorrhyncha: Aleyrodidae) inferred from 18S rDNA sequences
5. Strongly expanded 18S rRNA genes correlated with a peculiar morphology in the insect order of Strepsiptera
6. On the evolution of ribosomal RNA
7. The unusually long small-subunit ribosomal RNA of the crustacean, Daphnia pulex: Sequence and predicted secondary structure
8. The origin and evolution of variable-region helices in V4 and V7 of the small-subunit ribosomal RNA of branchiopod crustaceans
9. Vergleichend- und funktionell-anatomische Untersuchung am Pleon der Oniscidea (Crustacea, Isopoda). Zugleich ein Beitrag zur phylogenetischen Systematik der Landasseln
10. Phylogenetic relationships within the Oniscidea (Crustacea, Isopoda)
11. Problems with parsimony in sequences of biased base composition
12. A probability model for inferring evolutionary trees
13. Confidence limits on phylogenies: An approach using the bootstrap
14. Phylogenies from molecular sequences: Inference and reliability
15. Morphology of the pleopodal lungs in the Eubelidae (Crustacea, Oniscidea)
16. Philosciids with pleopodal lungs? The case of the genus Aphiloscia Budde-Lund, 1908 (Crustacea: Isopoda: Oniscidea), with a description of six new species
17. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
18. Nucleotide substitution models and estimation of phylogeny
19. On the phylogeny of Antarctic and South American Serolidae (Crustacea, Isopoda): Molecules and morphology
20. The unusually long small subunit ribosomal DNA of Phreatamoeba balamuthi
21. Morphologie und Evolution der Lungen bei den terrestrischen Isopoden (Crustacea, Isopoda, Oniscoidea)
22. The biology of terrestrial isopods: Terminology and classification
23. Limitations of the evolutionary parsimony method of phylogenetic analysis
24. Chromosome-sized DNA molecules from Drosophila
25. Molecular phylogeny of selected decapod Crustaceans based on 18S rRNA nucleotide sequences
26. The longest 18S ribosomal RNA ever known: Nucleotide sequence and presumed secondary structure of the 18S rRNA of the pea aphid, Acyrthosiphon pisum
27. Evolutionary analysis of length-variable sequences: Divergent domains of ribosomal RNA
28. Slipped-strand mispairing: A major mechanism for DNA sequence evolution
29. The characterization of enzymatically amplified eucaryotic 16S-like rRNA-coding regions
30. Relative efficiency of different tree-making methods for molecular data
31. Simplicity-correlated size growth of the nuclear 28S ribosomal RNA D3 expansion segment in the Crustacean order Isopoda
32. Ribosomal RNA: A key to phylogeny
33. Characterization of a flatworm ribosomal RNA-encoding gene: Promoter sequence and small subunit rRNA secondary structure
34. The neighbor-joining method: A new method for reconstructing phylogenetic trees
35. Relative efficiencies of the Fitch-Margoliash, maximum-parsimony, maximum-likelihood, minimum-evolution, and neighbor-joining methods of phylogenetic tree construction in obtaining the correct tree
36. The relationship between homoplasy and confidence in a phylogenetic tree
37. Asseln
38. Die Landisopoden (Oniscoidea) Griechenlands 4. Beitrag: Gattung Protracheoniscus, Teil I (Trachelipidae)
39. Phylogenetics in Oniscoidea
40. Die Land-Isopoden (Oniscidea) Griechenlands. 12. Beitrag: Gattungen Lepidoniscus und Philoscia (Philosciidae)
41. Terrestrial isopods from West Africa. Part 2: Families Tylidae, Ligiidae, Trichoniscidae, Styloniscidae, Rhyscotidae, Halophiloscidae, Philoscidae, Platyarthridae, Trachelipidae, Porcellionidae, Armadillidiidae
42. Relative efficiencies of maximum parsimony and distance-matrix methods in obtaining the correct phylogenetic tree
43. The monophyly of brachyuran crabs: A phylogenetic study based on 18S rRNA
44. Phylogenetic study of cirripedes and selected relatives (Thecostraca) based on 18S rDNA sequence analysis
45. Characterization of two sibling species of the genus Stylonychia (Ciliata, Hypotricha) S. mytilus Ehrenberg, 1838 and S. lemnae n. sp. II. Biochemical characterization
46. Quartet puzzling: A quartet maximum likelihood method for reconstructing tree topologies
47. Likelihood-mapping: A simple method to visualize phylogenetic content of a sequence alignment
48. Die Cylisticini (Isop. terr.) der Türkei (1. Beitrag zur Kenntnis der Türkischen Isopoden)
49. Phylogénie des isopodes terrestres
50. Phylogenèse et convergence chez les isopodes terrestres
51. Relative efficiency of the maximum-likelihood, Neighbor-Joining, and maximum parsimony methods when substitutions rate varies with site
52. Complete sequences of the rRNA genes of Drosophila melanogaster
53. Clustal W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
54. Essai sur l'origine, l'évolution et la classification des Oniscoidea (isopodes terrestres)
55. Ètude des isopodes terrestres récoltés au Vénézuela par le Dr. G. Marcuzzi suivie de considérations sur le peuplement du Continent de Gondwana
56. De l'emploi des appareils respiratoires pour l'établissement d'une classification rationelle des Isopodes terrestres (Oniscoidea)
57. The American land and fresh-water isopod crustacea
58. Zur Kenntnis der Atmung und der Atmungsorgane der Isopoda Oniscoidea. Ueber Isopoden. 20. Aufsatz
59. Zur Kenntnis der Entwicklung der Trachealsysteme und der Untergattungen von Porcellio und Tracheoniscus. Ueber Isopoden, 22. Aufsatz
60. Weltstellung der Isopoda terrestria, neue Familien derselben und neuen System
61. Phylogenetic analysis of slippage-like sequence variation in the V4 rRNA expansion segment in tiger beetles (Cicindelidae)
62. Evolution und phylogenetisches System der Isopoda. Stand der Forschung und neue Erkenntnisse
63. The theory and methodology of phylogenetic systematics is still evolving: A reply to Wilson
64. Identification of apomorphies and the role of ground patterns in molecular systematics
65. A priori estimation of phylogenetic information conserved in aligned sequences
66. Arthropod phylogeny inferred from partial 12S rRNA revisited: Monophyly of the Tracheata depends on sequence alignment
67. 18S rRNA alignments derived from different secondary structure models can produce alternative phylogenies