PALI: A database of alignments and phylogeny of homologous protein structures

Bioinformatics

Volumn 17, Issue 4, 2001, Pages 375-376

  Sujatha, S ^a   Balaji, S ^a   Srinivasan, N ^a  

^a INDIAN INSTITUTE OF SCIENCE   (India)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; DATA BASE; GENETIC PROCEDURES; PHYLOGENY; PRIORITY JOURNAL; PROTEIN AGGREGATION; PROTEIN FAMILY; PROTEIN STRUCTURE; SEQUENCE HOMOLOGY; THREE DIMENSIONAL IMAGING;

EID: 0035011451     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/17.4.375     Document Type: Article

References (13)

1. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
2. Use of a database of structural alignments and phylogenetic trees in investigating the relationship between sequence and structural variability among homologous proteins
3. PALI-a database of phylogeny and alignment of homologous protein structures
4. The relation between the divergence of sequence and structure in proteins
5. Comparison of conformational characteristics in structurally similar protein pairs
6. Molecular anatomy: Phyletic relationships derived from three-dimensional structures of proteins
7. HOMSTRAD: A database of protein structure alignments for homologous families
8. SCOP: A structural classification of proteins database for the investigation of sequences and structures
9. Multiple protein sequence alignment from tertiary structure comparison: Assignment of global and residue confidence levels
10. Definition of general topological equivalence in protein structures. A procedure involving comparison of properties and relationships through simulated annealing and dynamic programming
11. Advances in comparative protein-structure modelling