Origin and radiation of the house mouse: Mitochondrial DNA phylogeny

Journal of Evolutionary Biology

Volumn 9, Issue 4, 1996, Pages 391-415

  Boursot, P ^a   Din, W ^a   Anand, R ^b   Darviche, D ^c   Dod, B ^a   Von Deimling, F ^a   Talwar, G P ^b   Bonhomme, F ^a  

^a CNRS   (France)

^b NATIONAL INSTITUTE OF IMMUNOLOGY   (India)

^c FERDOWSI UNIVERSITY OF MASHHAD   (Iran)

Author keywords

mitochondrial DNA; Mus musculus; phylogeography; radiation

Indexed keywords

MUS MUSCULUS; MUSCULUS; MUS MUSCULUS CASTANEUS; MUS MUSCULUS DOMESTICUS; MUS MUSCULUS MUSCULUS;

HOUSE MOUSE; MITOCHONDRIAL DNA; PHYLOGENY; RADIATION;

AFRICA, (NORTH); ASIA; INDIA, (NORTH); MIDDLE EAST;

EID: 0029659472     PISSN: 1010061X     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1420-9101.1996.9040391.x     Document Type: Article

References (61)

1. Auffray, J.-C., F. Vanlerberghe and J. Britton-Davidian. 1990. House mouse progression in Eurasia: a palaeontological and archaeozoological approach. Biol. J. Linn. Soc. 41(1-3): 13-25.
2. Avise, J. C. 1986. Mitochondrial DNA and the evolutionary genetics of higher animals. Phil. Trans. R. Soc. London, Ser. B 312: 325-342.
3. Avise, J. C. 1992. Molecular population structure and the biogeographic history of a regional fauna: a case history with lessons for conservation biology. Oikos 63: 62-76.
4. Avise, J. C., J. Arnold, R. M. Ball, E. Bermingham, T. Lamb, J. E. Neigel, C. A. Reeb and N. C. Saunders. 1987. Intraspecific phylogeography: the mitochondrial DNA bridge between population genetics and systematics. Ann. Rev. Ecol. Syst. 18: 489-522.
5. Avise, J. C., J. E. Neigel and J. Arnold. 1984. Demographic influences on mitochondrial DNA lineage survivorship in animal populations. J. Mol. Evol. 20: 99-105.
6. Ball, R. M., J. E. Neigel and J. C. Avise. 1990. Gene genealogies within the organismal pedigrees of random-mating populations. Evolution 44(2): 360-370.
7. Bibb, M. J., R. A. Van Etten, C. T. Wright, M. W. Walberg and D. A. Clayton. 1981. Sequence and gene organization of mouse mitochondrial DNA. Cell 26: 167-180.
8. Bonhomme, F. 1986. Molecules, populations and species evolution in the genus Mus (Mammalia: Rodentia). pp. 125-144. In K. Iwatsuki, P. H. Raven and W. J. Bock (Eds.), Modern Aspects of Species. University of Tokyo Press, Tokyo.
9. Bonhomme, F., R. Anand, D. Darviche, W. Din and P. Boursot. 1994. The house mouse as a ring species? pp. 13-23. In K. Moriwaki, T. Shiroishi and H. Yonekawa (Eds.), Genetics in Wild Mice Its Application to Biomedical Research. Japan Sci. Soc. Press Tokyo S. Karger, Basel.
10. Bonhomme, F., J. Catalan, J. Britton-Davidian, V. M. Chapman, K. Moriwaki, E. Nevo and L. Thaler. 1984. Biochemical diversity and evolution in the genus Mus. Biochem. Genet. 22(3/4): 275-303.
11. Bonhomme, F., N. Miyashita, P. Boursot, J. Catalan and K. Moriwaki. 1989. Genetical variation and polyphyletic origin in Japanese Mus musculus. Heredity 63: 299-308.
12. Boursot, P., J.-C. Auffray, J. Britton-Davidian and F. Bonhomme. 1993. The evolution of house mice. Annu. Rev. Ecol. Syst. 24: 119-152.
13. Boursot, P. and F. Bonhomme. 1986. Génétique et évolution due génome mitochondrial des Métazoaires. Genet. Sel. Evol. 18: 73-98.
14. Boursot, P., F. Bonhomme, J. Catalan and K. Moriwaki. 1989. Variation of a Y chromosome repeated sequence across subspecies of Mus musculus. Heredity 63: 289-297.
15. Boursot, P., H. Yonekawa and F. Bonhomme. 1987. Heteroplasmy in mice with deletion of a large coding region of mitochondrial DNA. Mol. Biol. Evol. 4: 46-55.
16. Britton-Davidian, J. 1990. Genie differentiation in M. m. domesticus populations from Europe, the Middle East and North Africa: geographic patterns and colonization events. Biol. J. Linn. Soc. 41(1-3): 27-45.
17. Charlesworth, B., M. T. Morgan and D. Charlesworth. 1993. The effect of deleterious mutations on neutral molecular evolution. Genetics 134: 1289-1303.
18. DeSalle, R. and A. Templeton. 1988. Founder effects and the rate of mitochondrial evolution in Hawaian Drosophila. Evolution 42(5): 1076-1084.
19. Di Rienzo, A. and A. C. Wilson. 1991. Branching pattern in the evolutionary tree for human mitochondrial DNA. Proc. Natl. Acad. Sci. USA 88: 1597-1601.
20. Din, W., R. Anand, P. Boursot, D. Darviche, E. Jouvin-Marche, B. Dod, A. Orth, G. P. Talwar, P.-A. Cazenave and F. Bonhomme (in press). Origin and radiation of the house mouse: clues from nuclear genes. J. Evol. Biol.
21. Felsenstein, J. 1982. How can we infer geography and history from gene frequencies? J. Theor. Biol. 96: 9-20.
22. Felsenstein, J. 1986. Distance methods: a reply to Farris. Cladistics 2: 130-144.
23. Felsenstein, J. 1993. PHYLIP (Phylogeny Inference Package). Seattle: University of Washington.
24. Ferris, S. D., R. D. Sage, C.-M. Huang, J. T. Nielsen, U. Ritte and A. C. Wilson. 1983a. Flow of mitochondrial DNA across a species boundary. Proc. Natl. Acad. Sci. USA 80: 2290-2294.
25. Ferris, S. D., R. D., Sage, E. M. Prager, U. Ritte and A. C. Wilson. 1983b. Mitochondrial DNA evolution in mice. Genetics 105: 681-721.
26. Golding, B. (Ed.). 1994. Non-Neutral Evolution. Theories and Molecular Data. Chapman and Hall, New York.
27. Gyllensten, U. and A. C. Wilson. 1987. Interspecific mitochondrial DNA transfer and the colonisation of Scandinavia by mice. Genet. Res., Camb. 49: 25-29.
28. Hudson, R. R. 1990. Gene genealogies and the coalescent process, pp. 1-44. In D. Futuyma and J. Antonovics (Eds.), Oxford University Press, Oxford.
29. Hunt, W. G. and R. K. Selander. 1973. Biochemical genetics of hybridisation in European house mice. Heredity 31(1): 11-33.
30. Kraus, F. and M. M. Miyamoto. 1990. Mitochondrial genotype of unisexual salamander of hybrid origin is unrelated to either of its nuclear haplotypes. Proc. Natl. Acad. Sci. USA 87: 2235-2238.
31. Moriwaki, K. 1986. Molecular and cytogenetical differentiation of Mus musculus species, pp. 221-226. In K. Iwatsuki, P. H. Raven and W. J. Bock (Eds.), Modern Aspects of Species. University of Tokyo Press, Tokyo.
32. Moriwaki, K., H. Yonekawa, O. Gotoh, M. Minezawa, H. Winking and A. Gropp. 1984. Implications of the genetic divergence between European wild mice with Robertsonian translocations from the viewpoint of mitochondrial DNA. Genet. Res., Camb. 43: 227-287.
33. Nachman, M. W., S. N. Boyer and C. F. Aquadro. 1994. Non-neutral evolution at the mitochondrial NADH dehydrogenase subunit 3 gene in mice. Proc. Natl. Acad. Sci. USA 91: 6364-6368.
34. Nagamine, C. M., Y. Nishioka, K. Moriwaki, P. Boursot, F. Bonhomme and Y. F. C. Lau. 1992. The musculus-type Y chromosome of the laboratory mouse is of Asian origin. Mamm. Genome 3: 84-91.
35. Nagamine, C. M., T. Shiroishi, N. Miyashita, K. Tsuchiya, H. Ikeda, N. Takao, X.-L. Wu, M.-L. Jin, F. S. Wang, A. P. Kryukov, J. Akbarzade and K. Moriwaki. 1994. Distribution of the molossinus allele of Sry, the testis determining gene, in wild mice. Mol. Biol. Evol. 11(6): 864-874.
36. Nei, M. 1987. Molecular Evolutionary Genetics. Columbia University Press, New York.
37. Nei, M. and L. Jin. 1989. Variances of the average numbers of nucleotide substitutions within and between populations. Mol. Biol. Evol. 6: 240-300.
38. Nei, M. and W.-H. Li. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. USA 76: 5269-5273.
39. Nei, M. and J. Miller. 1990. A simple method for estimating average number of nucleotide substitutions within and between populations from restriction data. Genetics 125: 873-879.
40. Nei, M., and F. Tajima. 1983. Maximum likelihood estimation of the number of nucleotide substitutions for restriction sites data. Genetics 105: 207-216.
41. Prager, E. M., R. D. Sage, U. Gyllensten, W. K. Thomas, R. Hübner, C. S. Jones, L. Noble, J. B. Searle and A. C. Wilson. 1993. Mitochondrial DNA sequence diversity and the colonization of Scandinavia by house mice from East Holstein. Biol. J. Linn. Soc. 50: 85-122.
42. Rogers, A. R. and H. Harpending. 1992. Population growth makes waves in the distribution of pairwise genetic differences. Mol. Biol. Evol. 9(3): 552-569.
43. Sage, R. D. 1981. Wild mice. pp. 39-90. In H. L. Foster, J. D. Small and J. G. Fox (Eds.), The Mouse in Biomedical Research, Vol. I. Academic Press, New York.
44. Sage, R. D., W. R. Atchley and E. Capanna. 1993. House mice as models in systematic biology. Syst. Biol. 42(2): 523-561.
45. Sage, R. D., E. M. Prager, H. Tichy and A. C. Wilson. 1990. Mitochondrial DNA variation in the house' mouse, Mus domesticus (Rutty). Biol. J. Linn. Soc. 41(1-3): 105-123.
46. She, J. X., F. Bonhomme, P. Boursot, L. Thaler and F. Catzeflis. 1990. Molecular phylogenies in the genus Mus: comparative analysis of electrophoretic, scnDNA hybridisation, and mtDNA RFLP data. Biol. J. Linn. Soc. 41: 83-103.
47. Slatkin, M. and R. R. Hudson. 1991. Pairwise comparisons of mitochondrial DNA sequences in stable and exponentially growing populations. Genetics 129: 555-562.
48. Tajima, F. 1983. Evolutionary relationship of DNA sequences in finite populations. Genetics 105: 437-460.
49. Tajima, F. 1989. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123: 585-595.
50. Tegelström, H. 1987. Transfer of mitochondrial DNA from the northern redbacked vole (Clethrionomys rutilus) to the bank vole (C. glareolus). J. Mol. Evol. 24: 218-227.
51. Vanlerberghe, F., P. Boursot, J. T. Nielsen and F. Bonhomme. 1988. A steep cline for mitochondrial DNA in Danish mice. Genet. Res., Camb. 52: 185-193.
52. Wallis, G. and J. W. Arntzen. 1989. Mitochondrial DNA variation in the crested newt superspecies: limited cytoplasmic gene flow among species. Evolution 43(1): 88-104.
53. Wayne, R. K. and S. M. Jenks. 1991. Mitochondrial DNA analysis implying extensive hybridization of the endangered red wolf Canis rufus. Nature 351: 565-568.
54. Wayne, R. K., N. Lehman, M. Allard and R. L. Honneycut. 1992. Mitochondrial DNA variability of the grey wolf: genetic consequences of population decline and habitat fragmentation. Conserv. Biol. 6(4): 559-569.
55. Wayne, R. K., A. Meyer, N. Lehman, B. Van Valkenburgh, P. W. Kat and T. K. Fuller. 1990. Large sequence divergence among mitochondrial DNA genotypes within populations of eastern African black-backed jackals. Proc. Natl. Acad. Sci. USA 87: 1772-1776.
56. Wheeler, L. L. and R. K. Seiander. 1972. Genetic variation in populations of the house mouse, Mus musculus, in the Hawaiian islands, pp. 269-296. In Studies in Genetics, VII. Univ. of Texas, Austin.
57. Yonekawa, H., O. Gotoh, Y. Tagashira, Y. Matsushima, L.-I. Shi, W. S. Cho, N. Miyashita and K. Moriwaki. 1986. A hybrid origin of Japanese mice, "Mus musculus molossinus". pp. 62-67. In M. Potter, J. H. Nadeau and M. P. Cancro (Eds.), The Wild Mouse in Immunology. Springer Verlag, Berlin.
58. Yonekawa, H., Moriwaki, O. Gotoh, J. -I. Hayashi, J. Watanabe, N. Miyashita, M. L. Petras and Y. Tagashira. 1981. Evolutionary relationships among five subspecies of Mus musculus based on restriction enzyme cleavage patterns of mitochondrial DNA. Genetics 98: 801-816.
59. Yonekawa, H., K. Moriwaki, O. Gotoh, N. Miyashita, Y. Matsushima, L. Shi, W. S. Cho, X.-L. Zhen and Y. Tagashira. 1988. Hybrid origin of Japanese mice "Mus musculus molossinus": evidence from restriction analysis of mitochondrial DNA. Mol. Biol. Evol. 5(1): 63-78.
60. Yonekawa, H., K. Moriwaki, O. Gotoh, N. Miyashita, S. Migita, F. Bonhomme, J. P. Hjorth, M. L. Petras and Y. Tagashira. 1982. Origin of laboratory mice deduced from restriction patterns of mitochondrial DNA. Differentiation 22: 222-226.
61. Yonekawa, H., K. Moriwaki, O. Gotoh, J. Watanabe, J.-I. Hayashi, N. Miyashita, M. L. Petras and Y. Tagashira. 1980. Relationship between laboratory mice and the subspecies Mus musculus domesticus based on restriction endonuclease cleavage patterns of mitochondrial DNA. Jpn. J. Genet. 55(4): 289-296.