A normalized root-mean-square distance for comparing protein three-dimensional structures

Protein Science

Volumn 10, Issue 7, 2001, Pages 1470-1473

  Carugo, Oliviero ^a,b   Pongor, Sándor ^a  

^a INTERNATIONAL CENTRE FOR GENETIC ENGINEERING AND BIOTECHNOLOGY   (Italy)

^b UNIVERSITY OF PAVIA   (Italy)

Author keywords

Root mean square distance; Structure classification; Structure comparison; Three dimensional similarity

Indexed keywords

ARTICLE; ATOM; GENETIC ENGINEERING; PRIORITY JOURNAL; PROTEIN STRUCTURE; STRUCTURE ACTIVITY RELATION; STRUCTURE ANALYSIS; THREE DIMENSIONAL IMAGING;

ALGORITHMS; ANIMALS; DATABASES, FACTUAL; HUMANS; MODELS, MOLECULAR; PROTEIN CONFORMATION; PROTEIN STRUCTURE, TERTIARY; PROTEINS;

EID: 0034977013     PISSN: 09618368     EISSN: None     Source Type: Journal    
DOI: 10.1110/ps.690101     Document Type: Article

References (11)

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7. A solution for the best rotation to relate two sets of vectors
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10. Favorable domain size in proteins
11. An integrated approach to the analysis and modeling of protein sequences and structures. I. Protein structural alignment and a quantitative measure for protein structural distance