Incorporating knowledge-based biases into an energy-based side-chain modeling method: Application to comparative modeling of protein structure

Biopolymers

Volumn 59, Issue 2, 2001, Pages 72-86

  Mendes, Joaquim ^a   Nagarajaram, Hampapathalu A ^b   Soares, Cláudio M ^a   Blundell, Tom L ^b   Carrondo, Maria Arménia ^a  

^a INSTITUTO DE TECNOLOGIA QUÍMICA E BIOLÓGICA   (Portugal)

^b UNIVERSITY OF CAMBRIDGE   (United Kingdom)

Author keywords

Backbone dependent rotamer library; Flexible rotamer model; Mean field theory; Protein structure prediction; Side chain modeling

Indexed keywords

BINDING ENERGY; BONE; MODEL STRUCTURES;

PROTEIN STRUCTURES;

PROTEINS;

ACCURACY; ARTICLE; CONFORMATIONAL TRANSITION; ENERGY TRANSFER; MOLECULAR MODEL; PROTEIN CONFORMATION; PROTEIN STRUCTURE; THEORY;

COMPUTER SIMULATION; DATABASES, FACTUAL; MODELS, THEORETICAL; PROTEIN CONFORMATION; PROTEINS; REPRODUCIBILITY OF RESULTS; THERMODYNAMICS;

EID: 0034957437     PISSN: 00063525     EISSN: None     Source Type: Journal    
DOI: 10.1002/1097-0282(200108)59:2<72::AID-BIP1007>3.0.CO;2-S     Document Type: Article

References (53)