An evolutionary model for the origin of non-randomness, long-range order and fractality in the genome

BioEssays

Volumn 23, Issue 7, 2001, Pages 647-656

  Almirantis, Yannis ^a   Provata, Astero ^b  

^a National Research Centre for Physical Sciences Demokritos   (Greece)

^b Institute of Physical Chemistry Demokritos National Centre for Scientific Research   (Greece)

Author keywords

[No Author keywords available]

Indexed keywords

ANALYTICAL PROCEDURES AND TECHNIQUES; GENOME; MODEL; MOLECULAR EVOLUTION;

DNA; EVOLUTION, MOLECULAR; GENOME; HUMANS; MODELS, GENETIC; MODELS, STATISTICAL;

EUKARYOTA;

EID: 0034920682     PISSN: 02659247     EISSN: None     Source Type: Journal    
DOI: 10.1002/bies.1090     Document Type: Article

References (35)

1. Correlations between the coding and non-coding regions in DNA
2. Long-range doublet correlations in DNA and the coding regions
3. Measurements of the effects that coding for a protein has on a DNA sequence and their use for finding genes
4. E. coli promoter sequences predict in vitro RNA polymerase activity
5. Graphic methods to determine the function of nucleic acid sequences
6. The study of correlation structures of DNA sequences: A critical review
7. A prevalent persistent global nonrandomness that distinguishes coding and non-coding eucaryotic nuclear DNA sequences
8. The information content of DNA I, II
9. Information parameters and randomness in mitochondrial DNA
10. The "clustered structure" of the purines/pyrimidines distribution in DNA distinguishes systematically between coding and non-coding sequences
11. Long-range correlations in nucleotide sequences
12. A standard deviation based quantification differentiates coding from non-coding DNA sequences and gives insight to their evolutionary history
13. Uncorrelated DNA walks
14. Correlations in intronless DNA
15. DNA correlations
16. Long or short range correlations in DNA sequences?
17. Evolution of long-range fractal correlations and 1/f noice in DNA base sequences
18. a spectrum in a noncoding DNA sequence
19. Generating nontrivial long-range correlations and 1/f spectra by replication and mutation
20. Scaling properties of coding and non-coding DNA sequences
21. Long and short-range correlations in genome organisation
22. Fractal Cantor patterns in the *sequence structure of DNA
23. The multiple codes of nucleotide sequences
24. Archaeal genomics: Do archaea have a mixed heritage?
25. Patchiness and correlations in DNA sequences
26. The DNA sequence of human chromosome 22
27. Random aggregation models for the formation and evolution or coding and non-coding DNA
28. Characterisation of the pufferfish (Fugu) genome as a compact model vertebrate genome
29. Simple34: An improved and enhanced implementation for VAX and Sun computers of the SIMPLE algorithm for analysis of clustered repetitive motifs in nucleotide sequences