메뉴 건너뛰기




Volumn 196, Issue 3, 1999, Pages 297-308

A standard deviation based quantification differentiates coding from non-coding DNA sequences and gives insight to their evolutionary history

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

EID: 0033531330     PISSN: 00225193     EISSN: None     Source Type: Journal    
DOI: 10.1006/jtbi.1998.0840     Document Type: Article
Times cited : (16)

References (27)
  • 2
    • 0002706128 scopus 로고
    • Long or short range correlations in DNA sequences?
    • Brussels, September 1993, Brussels: Free University of Brussels
    • Almirantis, Y. & Papageorgiou, S. (1993). Long or short range correlations in DNA sequences? In: Proceedings of the European Conference on Artificial Life Brussels, September 1993, pp. 9-140. Brussels: Free University of Brussels.
    • (1993) Proceedings of the European Conference on Artificial Life , pp. 9-140
    • Almirantis, Y.1    Papageorgiou, S.2
  • 3
    • 0031224964 scopus 로고    scopus 로고
    • The clustered structure of the purines/pyrimidines distribution in DNA distinguishes systematically between coding and non- coding sequences
    • Almirantis, Y. & Provata, A. (1997). The clustered structure of the purines/pyrimidines distribution in DNA distinguishes systematically between coding and non- coding sequences. Bull. Math. Biol. 57, 975-992.
    • (1997) Bull. Math. Biol. , vol.57 , pp. 975-992
    • Almirantis, Y.1    Provata, A.2
  • 5
    • 0000952690 scopus 로고    scopus 로고
    • Distribution of base pair repeats in coding and non-coding DNA sequences
    • Dokholyan, N. V., Buldyrev, S. V., Havlin, S. & Stanley, H. E. (1997). Distribution of base pair repeats in coding and non-coding DNA sequences. Phys. Rev. Letts 79, 5182-5185.
    • (1997) Phys. Rev. Letts , vol.79 , pp. 5182-5185
    • Dokholyan, N.V.1    Buldyrev, S.V.2    Havlin, S.3    Stanley, H.E.4
  • 6
    • 0032510454 scopus 로고    scopus 로고
    • Archaeal genomics: Do archaea have a mixed heritage?
    • Doolittle, W. F. & Logston, J. M., Jr. (1998). Archaeal genomics: Do archaea have a mixed heritage? Curr. Biol. 8, R209-R211.
    • (1998) Curr. Biol. , vol.8
    • Doolittle, W.F.1    Logston J.M., Jr.2
  • 7
    • 0026946737 scopus 로고
    • Word frequency and entropy in symbolic sequences: A dynamical perspective
    • Ebeling, W. & Nicolis, G. (1992). Word frequency and entropy in symbolic sequences: A dynamical perspective. Chaos, Solitons Fractals 2, 635-650.
    • (1992) Chaos, Solitons Fractals , vol.2 , pp. 635-650
    • Ebeling, W.1    Nicolis, G.2
  • 8
    • 5244285298 scopus 로고    scopus 로고
    • Correlations in DNA sequences: The role of protein coding segments
    • Herzel, H. & Grosse, I. (1997). Correlations in DNA sequences: The role of protein coding segments. Phys. Rev. E 55, 800-810.
    • (1997) Phys. Rev. E , vol.55 , pp. 800-810
    • Herzel, H.1    Grosse, I.2
  • 9
    • 4243465861 scopus 로고    scopus 로고
    • Entropies of biosequences: The role of repeats
    • Herzel, H., Ebeling, W. & Schmitt, A. O. (1997). Entropies of biosequences: The role of repeats. Phys. Rev. E 50, 5061-5071.
    • (1997) Phys. Rev. E , vol.50 , pp. 5061-5071
    • Herzel, H.1    Ebeling, W.2    Schmitt, A.O.3
  • 10
    • 0013471203 scopus 로고
    • The order of introns and long-range correlations in nucleotide sequences
    • Kapitonov, V. V. & Titov, I. I. (1994). The order of introns and long-range correlations in nucleotide sequences. Doklady Biol. Sci. 337, 403-405.
    • (1994) Doklady Biol. Sci. , vol.337 , pp. 403-405
    • Kapitonov, V.V.1    Titov, I.I.2
  • 11
    • 0027458843 scopus 로고
    • Patchiness and correlations in DNA sequences
    • Karlin, S. & Brendel, V. (1993). Patchiness and correlations in DNA sequences. Science 259, 677-680.
    • (1993) Science , vol.259 , pp. 677-680
    • Karlin, S.1    Brendel, V.2
  • 13
    • 84956088098 scopus 로고
    • á spectrum in a non-coding DNA sequence
    • á spectrum in a non-coding DNA sequence. Europhys. Letts 17, 655-660.
    • (1992) Europhys. Letts , vol.17 , pp. 655-660
    • Li, W.1    Kaneko, K.2
  • 14
    • 0026495650 scopus 로고
    • Correlations between the coding and non-coding regions in DNA
    • Mani, G. S. (1992a). Correlations between the coding and non-coding regions in DNA. J. Theor. Biol. 158, 429-445.
    • (1992) J. Theor. Biol. , vol.158 , pp. 429-445
    • Mani, G.S.1
  • 15
    • 0026492782 scopus 로고
    • Long-range doublet correlations in DNA and the coding regions
    • Mani, G. S. (1992b). Long-range doublet correlations in DNA and the coding regions. J. Theor. Biol. 158, 447-464.
    • (1992) J. Theor. Biol. , vol.158 , pp. 447-464
    • Mani, G.S.1
  • 17
    • 0013470868 scopus 로고
    • Chaotic dynamics in Linguistic-like processes at the syntactic and semantic levels: In pursuit of a multifractal attractor
    • Custi, J. L. & Karlqvist, A. eds. New York: John Wiley
    • Nicolis, J. S. & Katsikas, A. A. (1994). Chaotic dynamics in Linguistic-like processes at the syntactic and semantic levels: In pursuit of a multifractal attractor. In: Cooperation and Conflict in General Evolutionary Processes (Custi, J. L. & Karlqvist, A. eds). New York: John Wiley.
    • (1994) Cooperation and Conflict in General Evolutionary Processes
    • Nicolis, J.S.1    Katsikas, A.A.2
  • 19
    • 0030064378 scopus 로고    scopus 로고
    • Linguistic complexity of protein sequences as compared with texts of human languages
    • Popov, O., Segal, D. M. & Trifonov, E. N. (1996). Linguistic complexity of protein sequences as compared with texts of human languages. Bio Systems 38, 65-74.
    • (1996) Bio Systems , vol.38 , pp. 65-74
    • Popov, O.1    Segal, D.M.2    Trifonov, E.N.3
  • 21
    • 0031351245 scopus 로고    scopus 로고
    • Scaling properties of coding and non-coding DNA sequences
    • Provata, A. & Almirantis, Y. (1997). Scaling properties of coding and non-coding DNA sequences. Physica A 247, 482-496.
    • (1997) Physica A , vol.247 , pp. 482-496
    • Provata, A.1    Almirantis, Y.2
  • 23
    • 0021760028 scopus 로고
    • Measurements of the effects that coding for a protein has on a DNA sequence and their use for finding genes
    • Staden, R. (1984). Measurements of the effects that coding for a protein has on a DNA sequence and their use for finding genes. Nucleic Acids Res. 12, 551-567.
    • (1984) Nucleic Acids Res. , vol.12 , pp. 551-567
    • Staden, R.1
  • 24
    • 0024334889 scopus 로고
    • The multiple codes of nucleotide sequences
    • Trifonov, E. N. (1989). The multiple codes of nucleotide sequences. Bull. Math. Biol. 51, 417-432.
    • (1989) Bull. Math. Biol. , vol.51 , pp. 417-432
    • Trifonov, E.N.1
  • 25
    • 0002312194 scopus 로고
    • Gene splicing: Spatial separation of overlapping messages
    • Trifonov, E. N. (1993). Gene splicing: Spatial separation of overlapping messages. Computers Chem. 17, 27-31.
    • (1993) Computers Chem. , vol.17 , pp. 27-31
    • Trifonov, E.N.1
  • 26
    • 0025833642 scopus 로고
    • Periodicity in DNA coding sequences: Implications in gene evolution
    • Tsonis, A. A., Elsner, J. B. & Tsonis, P. A. (1991). Periodicity in DNA coding sequences: Implications in gene evolution. J. Theor. Biol. 151, 323-331.
    • (1991) J. Theor. Biol. , vol.151 , pp. 323-331
    • Tsonis, A.A.1    Elsner, J.B.2    Tsonis, P.A.3
  • 27
    • 0000204878 scopus 로고
    • Eolution of long-range fractal correlations and 1/f noice in DNA base sequences
    • Voss, R. F. (1992). Eolution of long-range fractal correlations and 1/f noice in DNA base sequences. Phys. Rev. Lett. 68, 3805-3808.
    • (1992) Phys. Rev. Lett. , vol.68 , pp. 3805-3808
    • Voss, R.F.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.