Molecular epidemiology of TT virus (TTV) and characterization of two novel TTV genotypes in Indonesia

Archives of Virology

Volumn 146, Issue 7, 2001, Pages 1249-1266

  Muljono, D H ^a   Nishizawa, T ^b   Tsuda, F ^c   Takahashi, M ^b   Okamoto, H ^b  

^a EIJKMAN INSTITUTE FOR MOLECULAR BIOLOGY   (Indonesia)

^b JICHI MEDICAL UNIVERSITY   (Japan)

^c Shinagawa ku   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CLONE; CODING REGION; GENETIC DIVERSITY; GENOTYPE; GEOGRAPHIC DISTRIBUTION; INDONESIA; POLYMERASE CHAIN REACTION; PREVALENCE; SEQUENCE ANALYSIS; SPECIFICITY; STRAIN DIFFERENCE; TT VIRUS; VIROLOGY; VIRUS CHARACTERIZATION; VIRUS DETECTION;

ADULT; CLONING, MOLECULAR; DNA VIRUS INFECTIONS; DNA, VIRAL; EPIDEMIOLOGY, MOLECULAR; EVOLUTION, MOLECULAR; FEMALE; GENOTYPE; HUMANS; INDONESIA; MALE; MIDDLE AGED; MOLECULAR SEQUENCE DATA; NUCLEIC ACIDS; OPEN READING FRAMES; PHYLOGENY; POLYMERASE CHAIN REACTION; SEQUENCE HOMOLOGY, AMINO ACID; SEQUENCE HOMOLOGY, NUCLEIC ACID; TORQUE TENO VIRUS;

TT VIRUS;

EID: 0034901396     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s007050170089     Document Type: Article

References (41)

1. TT virus infection is widespread in the general populations from different geographic regions
2. Complete sequences of two highly divergent European isolates of TT virus
3. Ovalbumin gene: Evidence for a leader sequence in mRNA and DNA sequence at the exon-intron boundaries
4. Characterization of a highly divergent TT virus genome
5. Complete circular DNA genomes of a TT virus variant (isolate name SANBAN) and 44 partial ORF2 sequences implicating a great degree of diversity beyond genotypes
6. ODEN: A program package for molecular evolutionary analysis and database search of DNA and amino acid sequences
7. TT virus infection in patients with hepatitis C: Frequency, persistence, and sequence heterogeneity
8. Influence of primers on the detection of TT virus DNA by polymerase chain reaction
9. Three spliced mRNAs of TT virus transcribed from a plasmid containing the entire genome in COS1 cells
10. Sequence heterogeneity of TT virus and closely related viruses
11. Identification of a novel GC-rich 113-nucleotide region to complete the circular, single-stranded DNA genome of TT virus, the first human circovirus
12. A catalogue of splice junction sequences
13. An easy dipstick assay for anti-core antibodies to screen blood donors for hepatitis C virus viremia
14. Distribution of the hepatitis B surface antigen subtypes in Indonesia: Implications for ethnic heterogeneity and infection control measures
15. TT virus (TTV) genotypes in native and non-native prostitutes of Irian Jaya, Indonesia: Implication for non-occupational transmission
16. Molecular and biophysical characterization of TT virus: Evidence for a new virus family infecting humans
17. Recently discovered blood-borne viruses: Are they hepatitis viruses or merely endosymbionts?
18. A novel DNA virus (TTV) associated with elevated transaminase levels in posttransfusion hepatitis of unknown etiology
19. Beak and feather disease virus and porcine circovirus genomes: Intermediates between the geminiviruses and plant circoviruses
20. Chicken anaemia virus infection: Molecular basis of pathogenicity
21. The entire nucleotide sequence and classification of a hepatitis C virus isolate of a novel genotype from an Indonesia patient with chronic liver disease
22. Molecular cloning and characterization of a novel DNA virus (TTV) associated with posttransfusion hepatitis of unknown etiology
23. Fecal excretion of a nonenveloped DNA virus (TTV) associated with posttransfusion non-A-G hepatitis
24. Marked genomic heterogeneity and frequent mixed infection of TT virus demonstrated by PCR with primers from coding and noncoding regions
25. The entire nucleotide sequence of a TT virus isolate from the United States (TUS01): Comparison with reported isolates and phylogenetic analysis
26. Circular double-stranded forms of TT virus DNA in the liver
27. Sequestration of TT virus of restricted genotypes in peripheral blood mononuclear cells
28. TT virus mRNAs detected in the bone marrow cells from an infected individual
29. Global distribution of transfusion-transmitted virus
30. The neighbor-joining method: A new method for reconstructing phylogenetic tree
31. Molecular epidemiology of hepatitis B virus in Indonesia
32. Detection of a novel DNA virus (TTV) in blood donors and blood products
33. Very high prevalence of TT virus (TTV) infection in general population of Japan revealed by a new set of PCR primers
34. Full or near full length nucleotide sequences of TT virus variants (types SANBAN and YONBAN) and the TT virus-like mini virus
35. Multiple infection of TT virus (TTV) with different genotypes in Japanese hemophiliacs
36. New genotypes of TT virus (TTV) and a genotyping assay based on restriction fragment length polymorphism
37. Genomic and molecular evolutionary analysis of a newly identified infectious agent (SEN virus) and its relationship to the TT virus family
38. Transmission of human TT virus (TTV) of genotype 1a to chimpanzees with fecal supernatant or serum from patients with acute TTV infection
39. Family Circoviridae
40. Excretion into bile of a novel unenveloped DNA virus (TT virus) associated with acute and chronic non-A-G hepatitis
41. The entire nucleotide sequences of two distinct TT virus (TTV) isolates (TJN01 and TJN02) remotely related to the original TTV isolates