A human rotavirus with rearranged genes 7 and 11 encodes a modified NSP3 protein and suggests an additional mechanism for gene rearrangement

Journal of Virology

Volumn 75, Issue 16, 2001, Pages 7305-7314

  Gault, E ^a   Schnepf, N ^a   Poncet, D ^a   Servant, A ^a   Teran, S ^a   Garbarg Chenon, A ^a  

^a ARMAND TROUSSEAU HOSPITAL   (France)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; DOUBLE STRANDED RNA; NEUROENDOCRINE SPECIFIC PROTEIN; RNA POLYMERASE;

3' UNTRANSLATED REGION; ARTICLE; CASE REPORT; CELL CULTURE; GENE DELETION; GENE DUPLICATION; GENE REARRANGEMENT; HUMAN; IMMUNE DEFICIENCY; INFANT; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PRIORITY JOURNAL; RNA REPLICATION; ROTAVIRUS;

GENE EXPRESSION REGULATION, VIRAL; GENE REARRANGEMENT; HUMANS; RNA-BINDING PROTEINS; ROTAVIRUS; VIRAL NONSTRUCTURAL PROTEINS; VIRAL PROTEINS;

EID: 0034897699     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/JVI.75.16.7305-7314.2001     Document Type: Article

References (47)

1. Reassortment of human rotaviruses carrying rearranged genomes with bovine rotavirus
2. Expression of two bovine rotavirus non-structural proteins (NSP2, NSP3) in the baculovirus system and production of monoclonal antibodies directed against the expressed proteins
3. Nucleotide sequences of normal and rearranged RNA segments 10 of human rotaviruses
4. Isolation of group A swine rotaviruses displaying atypical electropherotypes
5. Atypical rotavirus from South African neonates
6. Bovine rotavirus with rearranged genome reassorts with human rotavirus
7. De novo synthesis of minus strand Rna by the rotavirus RNA polymerase in a cell-free system involves a novel mechanism of initiation
8. Rotavirus RNA replication requires a single-stranded 3′ end for efficient minus-strand synthesis
9. Genome rearrangements of rotaviruses
10. Rotaviruses and their replication
11. Study of genetic reassortment between two human rotaviruses
12. Structure of rearranged genome segment 11 in two different rotavirus strains generated by a similar mechanism
13. Evidence of duplication and deletion in super short segment 11 of rabbit rotavirus Alabama strain
14. Reassortment of human rotavirus possessing genome rearrangements with bovine rotavirus: Evidence for host cell selection
15. The carboxyl-half of the rotavirus nonstructural protein NS53 (NSP1) is not required for virus replication
16. Genome rearrangements of bovine rotavirus after serial passage at high multiplicity of infection
17. Heterogeneity of genome rearrangements in rotaviruses isolated from a chronically infected immunodeficient child
18. The mechanism of RNA recombination in poliovirus
19. Rearrangement generated in double genes, NSP1 and NSP3, of viable progenies from a human rotavirus strain
20. Sequence analysis of normal and rearranged nsp5 genes from human rotavirus strains isolated in nature - Implications for the occurrence of the rearrangement at the step of plus strand synthesis
21. Interpreting cDNA sequences: Some insights from studies on translation
22. RNA recombination in animal and plant viruses
23. Cloning of noncultivatable human rotavirus by single primer amplification
24. Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure
25. Sequence analysis of gene 11 equivalents from "short" and "super short" strains of rotavirus
26. Characterization of an oligomerization domain and RNA-binding properties on rotavirus nonstructural protein NS34
27. Genomic rearrangements in human rotavirus strain Wa; analysis of rearranged RNA segment 7
28. Characterisation of rearranged NSP5 gene of a human rotavirus
29. Open reading frame in rotavirus mRNA specifically promotes synthesis of double-stranded RNA: Template size also affects replication efficiency
30. The genomes of rotaviruses isolated from chronically infected immunodeficient children
31. Identification of the RNA-binding, dimerization, and eIF4G1-binding domains of rotavirus nonstructural protein NSP3
32. Rotavirus RNA-binding protein NSP3 interacts with eIF4GI and evicts the poly(A) binding protein from eIF4F
33. Isolation and characterization of two group A rotaviruses with unusual genome profiles
34. Comparative nucleotide and amino acid sequence analysis of the sequence-specific RNA-binding rotavirus nonstructural protein NSP3
35. The primary structure of crossover regions of intertypic poliovirus recombinants: A model of recombination between RNA genomes
36. Detailed structural analysis of a genome rearrangement in bovine rotavirus
37. Predicting thermodynamic properties of RNA
38. Rearrangement of the VP6 gene of a group A rotavirus in combination with a point mutation affecting trimer stability
39. Diversity in rotavirus genomes
40. An optimized freeze-squeeze method for the recovery of DNA fragments from agarose gels
41. Isolation of two lapine rotaviruses: Characterization of their subgroup, serotype and RNA electropherotypes
42. Genomic concatemerization/deletion in rotaviruses: A new mechanism for generating rapid genetic change of potential epidemiological importance
43. Studies on the recombination between RNA genomes of poliovirus: The primary structure and nonrandom distribution of crossover regions in the genomes of intertypic poliovirus recombinants
44. Coaxial stacking of helixes enhances binding of oligoribonucleotides and improves predictions of RNA folding
45. The 3′-terminal consensus sequence of rotavirus mRNA is the minimal promoter of negative-strand RNA synthesis
46. Crossover regions in foot-and-mouth disease virus (FMDV) recombinants correspond to regions of high local secondary structure
47. Algorithms and thermodynamics for RNA secondary structure prediction: A practical guide