Decomposition of protein tryptophan fluorescence spectra into log-normal components. II. The statistical proof of discreteness of tryptophan classes in proteins

Biophysical Journal

Volumn 81, Issue 3, 2001, Pages 1710-1734

  Reshetnyak, Yana K ^a,b   Burstein, Edward A ^a  

^a INSTITUTE OF THEORETICAL AND EXPERIMENTAL BIOPHYSICS   (Russian Federation)

^b UNIVERSITY OF NORTH TEXAS HEALTH SCIENCE CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN; TRYPTOPHAN;

ALGORITHM; ARTICLE; DECOMPOSITION; FLUORESCENCE; HUMAN; NONHUMAN; SPECTROFLUOROMETRY;

EID: 0034866669     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(01)75824-9     Document Type: Article

References (83)

1. Resolution of protein tryptophan fluorescence spectra into elementary components
2. Annexins IV (p32) and VI (p68) interact with erythrocyte membrane in a calcium-dependent manner
3. Regulatory proteins of crayfish tail muscle
4. Zur theorie des einfl 252 sses von L 246 sungsmitteln auf die elektronenspektren der molek 252 le
5. Study of some physico-chemical properties of the neurotoxic complex and its components from the venom of Bulgarian sand viper, Vipera ammodytes ammodytes. I. Luminescence of tryptophan residues
6. Fluorescence of neurotoxins from Middle-Asian cobra venom
7. Study of the neurotoxic complex and its components from the venom of Bulgarian sand viper, Vipera ammodytes ammodytes
8. Reinterpretation of luminescence properties of neurotoxins from the venom of Middle-Asian cobra, Naja oxiana
9. Quenching of protein fluorescence. I. Principles of the method. Solutions of tryptophan, tyrosine and denatured proteins
10. Luminescence of protein chromophores (model studies)
11. Intrinsic protein luminescence (the nature and application)
12. The study of fast dynamics of protein structure using the intrinsic fluorescence methods
13. The intrinsic luminescence of proteins is a method for studies of the fast structural dynamics
14. Decomposition of protein tryptophan fluorescence spectra into log-normal components. I. Decomposition algorithms
15. Log-normal description of fluorescence spectra of organic fluorophores
16. The fine structure of luminescence spectra of azurin
17. Fluorescence and the location of tryptophan residues in protein molecules
18. The structure stability of KPR (Kinase Related Protein)
19. The effect of pH on the conformation and stability of the structure of plant toxin ricin
20. The effect of pH on the conformation and stability of the structure of plant toxin-ricin
21. Similarity of protein conformation at low pH and high temperature observed for B-chains of two plant toxins: Ricin and mistletoe lectin 1
22. The structure of ricin: The study by the fluorescence quenching method
23. The structure of toxic protein: The mistletoe lectin at different pH. The study by intrinsic fluorescence methods
24. b transitions of tryptophan: Applications of theory and experimental observations to fluorescence of proteins
25. Tryptophan fluorescence shifts in proteins from hybrid simulations: An electrostatic approach
26. Toward understanding tryptophan fluorescence in proteins
27. Isolation and properties of a sarcoplasmic calcium-binding protein from crayfish
28. Spectrofluorimetric studies on C-terminal 34 kDa fragment of caldesmon
29. Fluorescence studies of extracellular guanyl-specific ribonuclease C2 from Aspergillus clavatus
30. A new large-scale purification procedure for muscular parvalbumins
31. The 3-methylindole/n-butanol exciplexes evidence for two exciplex sites in indole compounds
32. Fluorescence of some proteins in water-dioxane solutions
33. Tryptophan fluorescence of serum albumins
34. Fluorescence of β-lactalbumin AB under various physico-chemical conditions. I. Influences of pH and binding of sodium dodecyl sulfate
35. Fluorescence of β-lactalbumin AB under various physico-chemical conditions. II. Denaturation by urea and various organic solvents
36. Tryptophan fluorescence properties of two forms of the tyrosyl-aminoacyl-tRNA-synthase (bovine liver)
37. The intrinsic fluorescence study of the structure of fibronectin
38. A structural study of filamin, a high-molecular-weight actin-binding protein from chicken gizzard
39. What determines the characteristics of the intrinsic UV-fluorescence of proteins? Analysis of the properties of the microenvironment and features of the localization of their tryptophan residues
40. Equilibrium dynamics of proteins. Intrinsic fluorescence study of melittin
41. Spektroskopische bestimmungen des dipolmomentes aromatischer verbindungen im ersten angeregten singulettzustand
42. Die lösungsmittelabhägigkeit der wellenzahl von elektronenbanden und chemisch-physikalischen grundlagen
43. Status of indole photochemistry with special reference to biological application
44. The solvent effect on fluorescence spectrum. Change of solute-solvent interaction during the lifetime of excited solute molecule
45. Solvent effects upon fluorescence spectra and the dipole-moments of excited molecules
46. Deconvolution of the fluorescence emission spectrum of human anti-thrombin and identification of the tryptophan residues that are responsive to heparin binding
47. Mapping of suraminbinding sites of human neutrophil elastase: Investigation by fluorescence energy transfer and molecular modeling
48. Study of the physico-chemical properties of troponins I and T from the heart and skeletal muscles using protein fluorescence and calorimetric methods
49. 2-E transitions
50. Interaction of recombinant rat nucleoside diphosphate kinase alpha with bleached bovine retinal rod outer segment membranes: A possible mode of pH and salt effects
51. Comparative study of recombinant rat nucleoside diphosphate kinases alpha and beta by intrinsic protein fluorescence
52. Purification of muscle actin
53. Analytical description of electron-vibrational spectra of proteins
54. Calcium-regulated interactions of human alpha-lactalbumin with bee venom melittin
55. Cation binding effects on the pH, thermal and urea denaturation transitions in alpha-lactalbumin
56. A spectrofluorimetric study of the environment of tryptophans in bacteriorhodopsin
57. 2+-binding properties of bovine prolactin
58. Fluorescence studies of the calcium binding to whiting (Gadus merlangus) parvalbumin
59. Molten globule and protein folding
60. The identification of tryptophan residues responsible for ATP-induced increase in intrinsic fluorescence of myosin subfragment 1
61. Assignment of log-normal components of protein fluorescence spectra to individual tryptophan residues using their microenvironment properties in three-dimensional structure
62. Assignment of components of fluorescence spectra of serine proteases to clusters of tryptophan residues
63. Conformational changes of γG-globulin under dissociation on peptides
64. Band shapes of the electronic spectra of complex molecules
65. The effect of annexins IV and VI on the fluidity of phosphatidylserine/phosphatidylcholine bilayers studied with the use of 5-deoxylstearate spin label
66. Subfractionation and recombination of a neurotoxic complex of Bulgarian viper (Vipera ammodytes ammodytes)
67. Structural features of ricin agglutinin from Ricinus communis
68. Fluorescence and states of tryptophan in papain
69. Tryptophan fluorescence of proteins in solutions. The spectral maxima positions
70. The fluorescence of actin and actomyosin in various structural states
71. Fluorescence study of myosin and its fragments, heavy and light meromyosins, in concentrated solutions of neutral salts
72. The relation between conformation and UV luminescence of proteins
73. Exciplex studies. II. Indole and indole derivatives
74. Complete sequence of human vinculin and assignment of the gene to chromosome 10
75. Unfolding domains and tryptophan accessibility of a 59 kDa coiled-coil light meromyosin