Comparative analysis of RNA editing sites in higher plant chloroplasts

Journal of Molecular Evolution

Volumn 53, Issue 4-5, 2001, Pages 327-332

  Tsudzuki, Takahiko ^a   Wakasugi, Tatsuya ^b   Sugiura, Masahiro ^c  

^a AICHI GAKUIN UNIVERSITY   (Japan)

^b UNIVERSITY OF TOYAMA   (Japan)

^c NAGOYA CITY UNIVERSITY   (Japan)

Author keywords

Angiosperm; Chloroplast; Initiation codon; RNA editing; Tobacco; Transcript

Indexed keywords

CYTOSINE; URACIL;

AMINO ACID SUBSTITUTION; ANGIOSPERM; ARTICLE; CHLOROPLAST; COMPARATIVE STUDY; HIGHER PLANT; MAIZE; MOLECULAR EVOLUTION; NONHUMAN; RICE; RNA EDITING; START CODON; TOBACCO; TRANSCRIPTION INITIATION;

ANGIOSPERMS; BINDING SITES; CHLOROPLASTS; CHROMOSOME MAPPING; CODON, INITIATOR; EVOLUTION, MOLECULAR; PLANTS; RNA EDITING; RNA, PLANT; RNA, TRANSFER; TRANSCRIPTION, GENETIC;

EID: 0034821617     PISSN: 00222844     EISSN: None     Source Type: Journal    
DOI: 10.1007/s002390010222     Document Type: Article

References (33)

1. Sense from nonsense: How the genetic information of chloroplasts is altered by RNA editing
2. Introduction of a heterologous editing site into the tobacco plastid genome: The lack of RNA editing leads to a mutant phenotype
3. In vivo testing of a tobacco plastid DNA segment for guide RNA function in psbL editing
4. In vivo dissection of cis-acting determinants for plastid RNA editing
5. Transcript editing in chloroplasts of higher plants
6. Identification of critical nucleotide positions for plastid RNA editing site recognition
7. Extraplastidic site-specific factors mediate RNA editing in chloroplasts
8. Site-specific factor involved in the editing of the psbL mRNA in tobacco plastids
9. Sequences directing C to U editing of the plastid psbL mRNA are located within a 22 nucleotide segment spanning the editing site
10. Conservation of RNA editing between rice and maize plastids: Are most editing events dispensable?
11. Occurrence of plastid RNA editing in all major lineages of land plants
12. Transfer of plastid RNA-editing activity to novel sites suggests a critical role for spacing in editing-site recognition
13. The complete sequence of the rice (Oryza sativa) chloroplast genome: Intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals
14. Both RNA editing and RNA cleavage are required for translation of tobacco chloroplast ndhD mRNA: A possible regulatory mechanism for the expression of a chloroplast operon consisting of functionally unrelated genes
15. Occurrence of silent RNA editing in chloroplasts: Its species specificity and the influence of environmental and developmental conditions
16. RNA editing sites in tobacco chloroplast transcripts: Editing as a possible regulator of chloroplast RNA polymerase activity
17. Involvement of a site-specific trans-acting factor and a common RNA-binding protein in the editing of chloroplast mRNAs: Development of a chloroplast in vitro RNA editing system
18. Editing of a chloroplast mRNA by creation of an initiation codon
19. Complete nucleotide sequence of the Oenothera elata plastid chromosome, representing plastome I of the five distinguishable Euoenothera plastomes
20. Site-selective inhibition of plastid RNA editing by heat shock and antibiotics: A role for plastid translation in RNA editing
21. RNA editing in an untranslated region of the Ginkgo chloroplast genome
22. Internal editing of the maize chloroplast ndhA transcript restores codons for conserved amino acids
23. Complete sequence of the maize chloroplast genome: Gene content, hotspots of divergence and fine tuning of genetic information by transcript editing
24. Chinese spring wheat (Triticum aestivum L.) chloroplast genome: Complete sequence and contig clones
25. Complete structure of the chloroplast genome of Arabidopsis thaliana
26. The complete nucleotide sequence of the tobacco chloroplast genome: Its gene organization and expression
27. Angiosperm phylogeny inferred from multiple genes as a tool for comparative biology
28. Evolution and mechanism of translation in chloroplasts
29. High frequency plastid transformation in tobacco by selection for a chimeric aadA gene
30. Creation of a novel protein-coding region at the RNA level in black pine chloroplasts: The pattern of RNA editing in the gymnosperm chloroplast is different from that in angiosperms
31. Updated gene map of tobacco chloroplast DNA
32. Extensive RNA editing of U to C in addition to C to U substitution in the rbcL transcripts of hornwort chloroplasts and the origin of RNA editing in green plants
33. Extensive RNA editing and possible double-stranded structures determining editing sites in the atpB transcripts of hornwort chloroplasts