Comparison of methods for monitoring bacterial transport in the subsurface

Journal of Microbiological Methods

Volumn 47, Issue 2, 2001, Pages 219-231

  DeFlaun, Mary F ^a   Fuller, Mark E ^a   Zhang, Pengfei ^b   Johnson, William P ^b   Mailloux, Brian J ^c   Holben, William E ^d   Kovacik, William P ^d   Balkwill, David L ^e   Onstott, Tullis C ^c  

^a The Shaw Group Inc   (United States)

^b UNIVERSITY OF UTAH   (United States)

^c PRINCETON UNIVERSITY   (United States)

^d UNIVERSITY OF MONTANA   (United States)

^e FLORIDA STATE UNIVERSITY   (United States)

Author keywords

Bacterial detection and quantification; In situ bacterial tracking; Viable stains

Indexed keywords

CARBON 13; CARBOXYFLUORESCEIN DIACETATE SUCCINIMIDYL ESTER; FLUORESCENT DYE;

ACCURACY; ANALYTIC METHOD; ARTICLE; BACTERIAL COUNT; BACTERIUM DETECTION; BACTERIUM ISOLATION; CELL SEPARATION; CONTROLLED STUDY; DEVICE; FLOW CYTOMETRY; INTERMETHOD COMPARISON; NONHUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SPECTROFLUOROMETRY;

BACTERIA; BACTERIOLOGICAL TECHNIQUES; CELL DIVISION; ENVIRONMENT; FLOW CYTOMETRY; FLUORESCEINS; FLUORESCENT DYES; MASS SPECTROMETRY; POLYMERASE CHAIN REACTION; SPECTROMETRY, FLUORESCENCE; SUCCINIMIDES;

EID: 0034802771     PISSN: 01677012     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0167-7012(01)00307-4     Document Type: Article

References (34)

1. Virus and bacteria transport in a sandy aquifer, Cape Cod, MA
2. A simple method for counting small numbers of cells by flow cytometry
3. Signal quantification of bacteria for a groundwater transport experiment
4. Morphological and metabolic responses to starvation by the dissimilatory metal-reducing bacterium Shewanella alga BrY
5. Bacterial transport in fractured rock - A field-scale tracer test at the chalk river nuclear laboratories
6. Preliminary observations on bacterial transport in a coastal plain aquifer
7. Alterations in adhesion, transport, and membrane polymers in an adhesion-deficient Pseudomonad
8. Pilot-scale evaluation of bioaugmentation for in situ remediation of a carbon tetrachloride-contaminated aquifer
9. Examining bacterial transport in intact cores from Oyster, Virginia: Effect of facies type on bacterial breakthrough and retention
10. Development of a vital fluorescent stain method for monitoring bacterial transport in subsurface environments
11. Remediation of contaminated subsurface materials by a metal-reducing bacterium
12. Use of colloid filtration theory in modeling movement of bacteria through a contaminated sandy aquifer
13. Transport of microspheres and indigenous bacteria through a sandy aquifer: Results of natural- and forced-gradient tracer experiments
14. Role of physical heterogeneity in the interpretation of small-scale laboratory and field observations of bacteria, microbial-sized microsphere, and bromide transport through aquifer sediments
15. Physiological considerations in applying laboratory-determined buoyant densities to predictions of bacterial and protozoan transport in groundwater: Results of in-situ and laboratory tests
16. Bioaugmentation for site remediation
17. Monitoring bacterial transport by stable isotope enrichment of cells
18. Bacterial transport in porous media: Evaluation of a model using laboratory observations
19. Ferrographic tracking of bacterial transport in the field at the Narrow Channel Focus Area, Oyster VA
20. Evidence for detachment of indigenous bacteria from aquifer sediment in response to the arrival of injected bacteria
21. Whole-cell quantitative PCR method to monitor subsurface bacterial transport
22. Validity of fluorochrom-stained bacteria as tracers of short-term microbial transport through porous media
23. Electrospray ionization compatible reversed phase separation of phospholipids: Incorporating piperidine as a post column modifier for negative ion detection by mass spectrometry
24. Analysis of in vitro lymphocyte adhesion and transendothelial migration by fluorescent-beads-based flow cytometric cell counting
25. In situ biodegradation of TCE contaminated groundwater
26. Rhodamine WT and Bacillus subtilis transport through an alluvial gravel aquifer
27. The effect of the minor groove binding agent DAPI (2-aminodiphenyl indole) on DNA-directed enzymes: An attempt to explain inhibition of plasmid expression in Escherichia coli
28. Laboratory investigations on the role of sediment surface and groundwater chemistry in transport of bacteria through a contaminated sandy aquifer
29. Field-scale evaluation of in situ bioaugmentation for remediation of chlorinated solvents in groundwater
30. Quantitation of cell concentration using the flow cytometer
31. Use of molecular techniques to evaluate the survival of a microorganism injected into an aquifer
32. Evaluation of hydraulic conductivities calculated from multiport-permeameter measurements
33. Rapid selective ferrographic enumeration of bacteria
34. Bacterial tracking using ferrographic separation