Sequence variability in the first internal transcribed spacer region within and among Cyclospora species is consistent with polyparasitism

International Journal for Parasitology

Volumn 31, Issue 13, 2001, Pages 1475-1487

  Olivier, C ^a,b   Van De Pas, S ^a,b   Lepp, P W ^a,b   Yoder, K ^a,b   Relman, D A ^a,b  

^a STANFORD UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b VA PALO ALTO HEALTH CARE SYSTEM   (United States)

Author keywords

Cyclospora cayetanensis; Cyclospora papionis; Internal transcribed spacer; Polymerase chain reaction based diagnosis; Polyparasitism; Ribosomal DNA

Indexed keywords

NUCLEOTIDE; RIBOSOME RNA;

PARASITE;

ARTICLE; BABOON; BIOASSAY; BIODIVERSITY; CONTROLLED STUDY; CYCLOSPORA; CYCLOSPORA CAYETANENSIS; CYCLOSPORA PAPIONIS; DNA SEQUENCE; FECES ANALYSIS; GENETIC VARIABILITY; GEOGRAPHY; HUMAN; OOCYST; PARASITISM; POLYMERASE CHAIN REACTION; TANZANIA;

ANIMALS; BASE SEQUENCE; CYCLOSPORA; CYCLOSPORIASIS; DNA, PROTOZOAN; DNA, RIBOSOMAL; DNA, RIBOSOMAL SPACER; HUMANS; MOLECULAR SEQUENCE DATA; PHYLOGENY; POLYMERASE CHAIN REACTION; RNA, RIBOSOMAL, 5.8S; RRNA OPERON; SEQUENCE HOMOLOGY, NUCLEIC ACID; SPECIES SPECIFICITY; VARIATION (GENETICS);

EID: 0034796761     PISSN: 00207519     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0020-7519(01)00283-1     Document Type: Article

References (47)

1. Intervening transcribed spacer region 1 variability in Cyclospora cayetanensis
2. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
3. Occurrence of an undescribed coccidian in man in Papua New Guinea
4. Population dynamics of Plasmodium falciparum in an unstable malaria area of eastern Sudan
5. Analysis of infraspecific variation among five strains of Eimeria maxima from North America
6. Molecular phylogeny of the other tissue coccidia: Lankesterella and Caryospora
7. PCR detection of Chlamydia trachomatis
8. PCR cloning and nucleotide sequence determination of the 18S rRNA genes and internal transcribed spacer 1 of the protozoan parasites Cryptosporidium parvum and Cryptosporidium muris
9. Identification of genetic heterogeneity in the Cryptosporidium parvum ribosomal repeat
10. Cryptosporidium is more closely related to the gregarines than to coccidia as shown by phylogenetic analysis of apicomplexan parasites inferred using small-subunit ribosomal RNA gene sequences
11. Update: Outbreaks of C. cayetanensis infection - United States and Canada
12. Cloning and characterization of the rRNA genes and flanking regions from Babesia bovis: Use of the genes as strain discriminating probes
13. Fast and reliable extraction of protozoan parasite DNA from fecal specimens
14. A least squares algorithm for fitting additive trees to proximity data
15. Morphologic and molecular characterization of new Cyclospora species from Ethiopian monkeys: C. cercopitheci sp. n. C. colobi sp. n. and C. papionis sp. n.
16. Attempts to establish experimental Cyclospora cayetanensis infection in laboratory animals
17. Base-calling of automated sequencer traces using phred
18. Consed: A graphical tool for sequence finishing
19. Cross-transmission studies with Eimeria arizonensis, E. arizonensis-like oocysts and Eimeria langebarteli: Host specificity at the genus and species level within the Muridae
20. Comparison of the internal transcribed spacer, ITS 1, from Toxoplasma gondii isolates and Neospora caninum
21. Template preparation for PCR and RFLP of amplification products for the detection and identification of Cyclospora sp. and Eimeria spp. oocysts directly from raspberries
22. An oligonucleotide-ligation assay for the differentiation between Cyclospora and Eimeria spp. polymerase chain reaction amplification products
23. Evidence for two single copy units in Theileria parva ribosomal RNA genes
24. Diagnosis of meningococcal meningitis by broad-range bacterial PCR with cerebrospinal fluid
25. Ribosomal RNA gene organization in Cryptosporidium parvum
26. Regulation and trafficking of three distinct 18 S ribosomal RNAs during development of the malaria parasite
27. Avian coccidiosis
28. Molecular characterization of Cyclospora-like organisms from baboons
29. The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions
30. Effects of sequence alignment and structural domains of ribosomal DNA on phylogeny reconstruction for the protozoan family sarcocystidae
31. Extraction-free, filter-based template preparation for rapid and sensitive PCR detection of pathogenic parasitic protozoa
32. Isolation of Cryptosporidium parvum and Cyclospora cayetanensis from vegetables collected in markets of an endemic region in Peru
33. Cyclospora species - A new protozoan pathogen of humans
34. Generalized neighbor-joining: More reliable phylogenetic tree reconstruction
35. Identification of the uncultured bacillus of Whipple's disease
36. Molecular phylogenetic analysis of Cyclospora, the human intestinal pathogen, suggests that it is closely related to Eimeria species
37. The neighbor-joining method: A new method for reconstructing phylogenetic trees
38. Cyclospora in non-human primates in Gombe, Tanzania
39. Cyclospora
40. Microvariation artifacts introduced by PCR and cloning of closely related 16S rRNA gene sequences
41. Cyclospora: An enigma worth unraveling
42. Phylogeny of the tissue cyst-forming coccidia
43. Template secondary structure promotes polymerase jumping during PCR amplification
44. Methods to prepare RNA and to isolate developmentally regulated genes from Eimeria
45. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
46. Constitutive expression of small subunit ribosomal RNA transcripts in Cryptosporidium parvum oocysts and intracellular stages
47. Waterborne transmission of Cryptosporidium, Cyclospora and Giardia