-
2
-
-
0025269492
-
Intrinsically bent DNA
-
Crothers, D. M., Haran, T. E., and Nadeau, J. G. 1990, Intrinsically bent DNA, J. Biol. Chem., 265, 7093-7096.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 7093-7096
-
-
Crothers, D.M.1
Haran, T.E.2
Nadeau, J.G.3
-
3
-
-
0025312950
-
Sequence-directed curvature of DNA
-
Hagerman, P. J. 1990, Sequence-directed curvature of DNA, Ann. Rev. Biochem., 59, 755-781.
-
(1990)
Ann. Rev. Biochem.
, vol.59
, pp. 755-781
-
-
Hagerman, P.J.1
-
4
-
-
0029087424
-
Effects of localized bending on DNA supercoiling
-
Yang, Y., Westcott, T. P., Pedersen, S. C., Tobias, I., and Olson, W. K. 1995, Effects of localized bending on DNA supercoiling, Trends Biochem. Sci., 20, 313-319.
-
(1995)
Trends Biochem. Sci.
, vol.20
, pp. 313-319
-
-
Yang, Y.1
Westcott, T.P.2
Pedersen, S.C.3
Tobias, I.4
Olson, W.K.5
-
5
-
-
0029956736
-
Bent DNA in the human adenovirus type 2 E1A enhancer is an architectural element for transcription stimulation
-
Ohyama, T. 1996, Bent DNA in the human adenovirus type 2 E1A enhancer is an architectural element for transcription stimulation, J. Biol. Chem., 271, 27823-27828.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 27823-27828
-
-
Ohyama, T.1
-
6
-
-
0029240529
-
An intrinsically bent region upstream of the transcription start site of the rRNA genes of Arabidopsis thaliana interacts with an HMG-related protein
-
Kneidl, C., Dinkl, E., and Grummt, F. 1995, An intrinsically bent region upstream of the transcription start site of the rRNA genes of Arabidopsis thaliana interacts with an HMG-related protein, Plant Mol. Biol., 27, 705-713.
-
(1995)
Plant Mol. Biol.
, vol.27
, pp. 705-713
-
-
Kneidl, C.1
Dinkl, E.2
Grummt, F.3
-
7
-
-
1842301048
-
Structural analysis of mouse rDNA: Coincidence between nuclease hypersensitive sites, DNA curvature and regulatory elements in the intergenic spacer
-
Langst, G., Schatz, T., Langowski, J., and Grummt, I. 1997, Structural analysis of mouse rDNA: coincidence between nuclease hypersensitive sites, DNA curvature and regulatory elements in the intergenic spacer, Nucleic Acids Res., 25, 511-517.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 511-517
-
-
Langst, G.1
Schatz, T.2
Langowski, J.3
Grummt, I.4
-
8
-
-
0027198848
-
DNA-histone interactions are sufficient to position a single nucleosome juxtaposing Drosophila Adh adult enhancer and distal promoter
-
Jackson, J. R. and Benyajati, C. 1993, DNA-histone interactions are sufficient to position a single nucleosome juxtaposing Drosophila Adh adult enhancer and distal promoter, Nucleic Acids Res., 21, 957-967.
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 957-967
-
-
Jackson, J.R.1
Benyajati, C.2
-
9
-
-
0025955262
-
A study of electrophoretic mobility of DNA in agarose and polyacrylamide gels
-
Calladine, C. R., Collis, C. M., Drew, H. R., and Mott, M. R. 1991, A study of electrophoretic mobility of DNA in agarose and polyacrylamide gels, J. Mol. Biol., 221, 981-1005.
-
(1991)
J. Mol. Biol.
, vol.221
, pp. 981-1005
-
-
Calladine, C.R.1
Collis, C.M.2
Drew, H.R.3
Mott, M.R.4
-
10
-
-
0028037902
-
Periodicity of DNA bend sites in the human ε-globin gene region: Possibility of sequence-directed nucleosome phasing
-
Wada-Kiyama, Y. and Kiyama, R. 1994, Periodicity of DNA bend sites in the human ε-globin gene region: Possibility of sequence-directed nucleosome phasing, J. Biol. Chem., 269, 22238-22244.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 22238-22244
-
-
Wada-Kiyama, Y.1
Kiyama, R.2
-
11
-
-
0029074404
-
Conservation and periodicity of DNA bend sites in the human β-globin gene locus
-
Wada-Kiyama, Y. and Kiyama, R. 1995, Conservation and periodicity of DNA bend sites in the human β-globin gene locus, J. Biol. Chem., 270, 12439-12445.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 12439-12445
-
-
Wada-Kiyama, Y.1
Kiyama, R.2
-
12
-
-
0033010426
-
DNA bend sites in the human β-globin locus: Evidence for a basic and universal structural component of genomic DNA
-
Wada-Kiyama, Y., Suzuki, K., and Kiyama, R. 1999, DNA bend sites in the human β-globin locus: Evidence for a basic and universal structural component of genomic DNA, Mol. Biol. Evol., 16, 922-930.
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 922-930
-
-
Wada-Kiyama, Y.1
Suzuki, K.2
Kiyama, R.3
-
13
-
-
0033009043
-
Localization of curved DNA and its association with nucleosome phasing in the promoter region of the human estrogen receptor α gene
-
Wada-Kiyarna, Y., Kuwabara, K., Sakuma, Y., Onishi, Y., Trifonov, E. N., and Kiyama, R. 1999, Localization of curved DNA and its association with nucleosome phasing in the promoter region of the human estrogen receptor α gene, FEBS Lett., 444, 117-124.
-
(1999)
FEBS Lett.
, vol.444
, pp. 117-124
-
-
Wada-Kiyarna, Y.1
Kuwabara, K.2
Sakuma, Y.3
Onishi, Y.4
Trifonov, E.N.5
Kiyama, R.6
-
14
-
-
0032526878
-
Conservation and continuity of periodic bent DNA in genomic rearrangements between the c-myc and immunoglobulin heavy chain μ, loci
-
Ohki, R., Hirota, M., Oishi, M., and Kiyama, R. 1998, Conservation and continuity of periodic bent DNA in genomic rearrangements between the c-myc and immunoglobulin heavy chain μ, loci, Nucl. Acids Res., 26, 3026-3033.
-
(1998)
Nucl. Acids Res.
, vol.26
, pp. 3026-3033
-
-
Ohki, R.1
Hirota, M.2
Oishi, M.3
Kiyama, R.4
-
15
-
-
0032585325
-
Localization and characterization of curved DNA in the human erythropoietin receptor gene by experimental and theoretical approaches
-
Rodley, P., Nishikawa, N. S., Hirota, M., Wada-Kiyama, Y., Noguchi, C. T., Oishi M., and Kiyama, R. 1998, Localization and characterization of curved DNA in the human erythropoietin receptor gene by experimental and theoretical approaches, DNA Res., 5, 349-354.
-
(1998)
DNA Res.
, vol.5
, pp. 349-354
-
-
Rodley, P.1
Nishikawa, N.S.2
Hirota, M.3
Wada-Kiyama, Y.4
Noguchi, C.T.5
Oishi, M.6
Kiyama, R.7
-
16
-
-
0000976134
-
Periodicity of DNA bend sites in eukaryotic genomes
-
Kiyama, R. 1998, Periodicity of DNA bend sites in eukaryotic genomes, Gene Ther. Mol. Biol., 1, 641-647.
-
(1998)
Gene Ther. Mol. Biol.
, vol.1
, pp. 641-647
-
-
Kiyama, R.1
-
17
-
-
0027181196
-
CURVATURE: Software for the analysis of curved DNA
-
Shpigelman, E. S., Trifonov, E. N., and Bolshoy, A. 1993, CURVATURE: software for the analysis of curved DNA, Computer Appl. in Biosci., 9, 435-440.
-
(1993)
Computer Appl. in Biosci.
, vol.9
, pp. 435-440
-
-
Shpigelman, E.S.1
Trifonov, E.N.2
Bolshoy, A.3
-
18
-
-
0024278548
-
The intrinsic curvature of DNA in solution
-
Calladine, C. R., Drew, H. R., and M. J. McCall. 1988, The intrinsic curvature of DNA in solution, J. Mol. Biol., 201, 127-137.
-
(1988)
J. Mol. Biol.
, vol.201
, pp. 127-137
-
-
Calladine, C.R.1
Drew, H.R.2
McCall, M.J.3
-
19
-
-
0031018530
-
Differential behavior of curved DNA upon untwisting
-
Brukner, I., Belmaaza, A., and Chartrand, P. 1997, Differential behavior of curved DNA upon untwisting, Proc. Natl. Acad. Sci. USA, 94, 403-406.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 403-406
-
-
Brukner, I.1
Belmaaza, A.2
Chartrand, P.3
-
20
-
-
0026329869
-
Helical repeat and chirality effects on DNA gel electrophoretic mobility
-
Drak, J. and Crothers, D. M. 1991, Helical repeat and chirality effects on DNA gel electrophoretic mobility, Proc. Natl. Acad. Sci. USA, 88, 3074-3078.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 3074-3078
-
-
Drak, J.1
Crothers, D.M.2
-
21
-
-
0031593199
-
Locus control regions of mammalian beta-globin gene clusters: Combining phylogenetic analyses and experimental results to gain functional insights
-
Hardison, R., Slightorn, J. L., Gumucio, D. L., Goodman, M., Stojanovic, N., and W., Miller. 1997, Locus control regions of mammalian beta-globin gene clusters: combining phylogenetic analyses and experimental results to gain functional insights, Gene, 205, 73-94.
-
(1997)
Gene
, vol.205
, pp. 73-94
-
-
Hardison, R.1
Slightorn, J.L.2
Gumucio, D.L.3
Goodman, M.4
Stojanovic, N.5
Miller, W.6
-
22
-
-
0002398438
-
Hemoglobin switching
-
Stamatoyannopoulos, G., Nienhuis, A. W., Majerus, P., and Varmus, H., eds. W. B. Saunders, Philadelphia
-
Stamatoyannopoulos, G. and Nienhuis, A. W. 1993, Hemoglobin switching, pp107-155. Stamatoyannopoulos, G., Nienhuis, A. W., Majerus, P., and Varmus, H., eds. The molecular basis of blood diseases, W. B. Saunders, Philadelphia.
-
(1993)
The Molecular Basis of Blood Diseases
, pp. 107-155
-
-
Stamatoyannopoulos, G.1
Nienhuis, A.W.2
-
23
-
-
0031964974
-
Gammaglobin gene promoter elements required for interaction with globin enhancers
-
Langdon, S. D. and Kaufman, R. E. 1998, Gammaglobin gene promoter elements required for interaction with globin enhancers, Blood, 91, 309-318.
-
(1998)
Blood
, vol.91
, pp. 309-318
-
-
Langdon, S.D.1
Kaufman, R.E.2
-
24
-
-
0027392751
-
Enhancer-dependent transcription of the epsilon-globin promoter requires promoter-bound GATA-1 and enhancer-bound AP-1/NF-E2
-
Gong, Q. and Dean, A. 1993, Enhancer-dependent transcription of the epsilon-globin promoter requires promoter-bound GATA-1 and enhancer-bound AP-1/NF-E2, Mol. Cell. Biol., 13, 911-917.
-
(1993)
Mol. Cell. Biol.
, vol.13
, pp. 911-917
-
-
Gong, Q.1
Dean, A.2
-
25
-
-
0029831107
-
An intrachromosomal repeating unit based on DNA bending
-
Wada-Kiyama, Y. and Kiyama, R. 1996, An intrachromosomal repeating unit based on DNA bending, Mol. Cell. Biol., 16, 5664-5673.
-
(1996)
Mol. Cell. Biol.
, vol.16
, pp. 5664-5673
-
-
Wada-Kiyama, Y.1
Kiyama, R.2
-
26
-
-
0032509094
-
Expression-dependent Perturbation of Nucleosomal Phases at HS2 of the Human β-LCR: Possible Correlation with Periodic Bent DNA
-
Onishi, Y., Wada-Kiyama, Y., and Kiyama, R. 1998, Expression-dependent Perturbation of Nucleosomal Phases at HS2 of the Human β-LCR: Possible Correlation with Periodic Bent DNA, J. Mol. Biol., 284, 989-1004.
-
(1998)
J. Mol. Biol.
, vol.284
, pp. 989-1004
-
-
Onishi, Y.1
Wada-Kiyama, Y.2
Kiyama, R.3
-
27
-
-
0026612803
-
The epsilon-globin gene silencer. Characterization by in vitro transcription
-
Wada-Kiyama, Y., Peters, B., and Noguchi, C. T. 1992, The epsilon-globin gene silencer. Characterization by in vitro transcription, J. Biol. Chem., 267, 11532-11538.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 11532-11538
-
-
Wada-Kiyama, Y.1
Peters, B.2
Noguchi, C.T.3
-
28
-
-
0024423518
-
A common protein binds to two silencers 5′ to the human beta-globin gene
-
Berg, P. E., Williams, D. M., Qian, R. L., Cohen, R. B., Cao, S. X., Mittelman, M., and Schechter, A. N. 1989, A common protein binds to two silencers 5′ to the human beta-globin gene, Nucleic Acids Res., 17, 8833-8852.
-
(1989)
Nucleic Acids Res.
, vol.17
, pp. 8833-8852
-
-
Berg, P.E.1
Williams, D.M.2
Qian, R.L.3
Cohen, R.B.4
Cao, S.X.5
Mittelman, M.6
Schechter, A.N.7
-
29
-
-
1842411320
-
Crystal structure of the nucleosome core particle at 2.8 A resolution
-
Luger, K., Mader, A. W., Richmond, R. K., Sargent, D. F., and Richmond, T. J. 1997, Crystal structure of the nucleosome core particle at 2.8 A resolution, Nature, 389, 251-260.
-
(1997)
Nature
, vol.389
, pp. 251-260
-
-
Luger, K.1
Mader, A.W.2
Richmond, R.K.3
Sargent, D.F.4
Richmond, T.J.5
-
31
-
-
0030595138
-
Nucleosonie DNA sequence pattern revealed by multiple alignment of experimentally mapped sequences
-
Ioshikhes, I., Bolshoy, A., Derenshteyn, K., Borodovsky, M., and Trifonov, E. N. 1996, Nucleosonie DNA sequence pattern revealed by multiple alignment of experimentally mapped sequences, J. Mol. Biol., 262, 129-139.
-
(1996)
J. Mol. Biol.
, vol.262
, pp. 129-139
-
-
Ioshikhes, I.1
Bolshoy, A.2
Derenshteyn, K.3
Borodovsky, M.4
Trifonov, E.N.5
|