Synthesis and Biophysical Characterization of tRNALys,3 Anticodon Stem-loop RNAs Containing the mcm5s2U Nucleoside

Organic Letters

Volumn 2, Issue 24, 2000, Pages 3865-3868

  Bajji, Ashok C ^a   Davis, Darrell R ^a  

^a UNIVERSITY OF UTAH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DYES, REAGENTS, INDICATORS, MARKERS AND BUFFERS; LYSINE TRANSFER RNA; NUCLEOSIDE; PSEUDOURIDINE;

ANTICODON; ARTICLE; CHEMISTRY; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; SYNTHESIS; THERMODYNAMICS;

ANTICODON; INDICATORS AND REAGENTS; MAGNETIC RESONANCE SPECTROSCOPY; NUCLEOSIDES; PSEUDOURIDINE; RNA, TRANSFER, LYS; THERMODYNAMICS;

EID: 0034736313     PISSN: 15237060     EISSN: None     Source Type: Journal    
DOI: 10.1021/ol006605h     Document Type: Article

References (35)

1. Sprinzl, M.; Horn, C.; Brown, M.; Ioudovitch, A.; Steinberg, S. Nucleic Acids Res. 1998, 26, 148-153.
2. Limbach, P. A.; Crain, P. F.; McCloskey, J. A. Nucleic Acids Res. 1994, 22, 2183-2196.
3. Yokoyama, S.; Nishimura, S. In tRNA: Structure, Biosynthesis and Function; Soll, D., RajBhandary, U., Eds.; ASM Press: Washington, DC, 1995; pp 207-224.
4. Agris, P. F. Prog. Nucleic Acids Res. Mol. Biol. 1996, 53, 74-129.
5. Björk, G. R. In Transfer RNA in Protein Synthesis; Hatfield, D. L., Lee, B. J., Pirtle, R. M., Eds.; CRC Press: Ann Arbor, 1992; pp. 23-85.
6. Beigleman, L.; Matulic-Adamic, M.; Karpeisky, A.; Haeberli, P.; Sweedler, D. Methods Enzymol. 2000, 317, 39-65.
7. Ryder, S. P.; Ortoleva-Donnelly, L.; Kosek, A. B.; Strobel, S. A. Methods Enzymol. 2000, 317, 92-109.
8. Agris, P.; Sierzputowska-Gracz, H.; Smith, W.; Malkiewicz, A.; Sochacka, E.; Nawrot, B. J. Am. Chem. Soc. 1992, 114, 2652-2656.
9. Sierzputowska-Gracz, H.; Sochacka, E.; Malkiewicz, A.; Kuo, K.; Gehrke, C.; Agris, P. J. Am. Chem. Soc. 1987, 109, 7171-7177.
10. Smith, W. S.; Sierzputowska-Gracz, H.; Sochacka, E.; Malkiewicz, A.; Agris, P. F. J. Am. Chem. Soc. 1992, 114, 7989-7997.
11. Watanabe, K.; Yokoyama, S.; Hansske, F.; Kasai, H.; Miyazawa, T. Biochem. Biophys. Res. Commun. 1979, 91, 671-677.
12. Davanloo, P.; Sprinzl, M.; Watanabe, k.; Albani, M.; Kersten, H. Nucleic Acids Res. 1979, 6, 1571-1581.
13. Yamamoto, Y.; Yokoyama, S.; Miyazawa, T.; Watanabe, K.; Higuchi, S. FEBS 1983, 157, 95-99.
14. Agris, P. Biochimie 1991, 73, 1345-1349.
15. Brierley, I.; Meredith, M. R.; Bloys, A. J.; Hagervall, T. G. J. Mol. Biol. 1997, 270, 360-373.
16. Sundaram, M.; Durant, P. C.; Davis, D. R. Biochemistry 2000, 39, 12575-12584.
17. Isel, C.; Ehresmann, C.; Keith, G.; Ehresmann, B.; Marquet, R. J. Mol. Biol. 1995, 247, 236-250.
18. Isel, C.; Westhof, E.; Massire, C.; Le Grice, S. F. J.; Ehresmann, B.; Ehresmann, C.; Marquet, R. EMBO J. 1999, 18, 1038-1048.
19. Fissekis, J. D.; Sweet, F. Biochemistry 1970, 9, 3136-3142.
20. Vorbruggen, H.; Strehlke, P. Chem. Ber. 1973, 106, 3039-3061.
21. Wincott, F.; DiRenzo, A.; Shaffer, C.; Grimm, S.; Tracz, D.; Workman, C.; Sweedler, D.; Gonzalez, C.; Scaringe, S.; Usman, N. Nucleic Acids Res. 1995, 23, 2677-2684.
22. Jager, A.; Engels, J. Tetrahedron Lett. 1984, 25, 1437-1440.
23. Hayakawa, Y.; Uchiyama, M.; Noyori, R. Tetrahedron Lett. 1986, 27, 4191-4194.
24. Kumar, R. K.; Davis, D. R. J. Org. Chem. 1995, 60, 7726-7727.
25. Shah, K.; Wu, H.; Rana, T. M. Bioconjugate Chem. 1994, 5, 508-512.
26. Gasparutto, D.; Livache, T.; Bazin, H.; Dupla, A.; Guy, A.; Khordin, A.; Molko, D.; Roget, A.; Teoule, R. Nucleic Acids Res. 1992, 20, 5159-5166.
27. Sproat, B.; Colonna, F.; Mulla, B.; Tsou, D.; Andrus, A.; Hampel, A.; Vinayak, R. Nucleosides Nucleotides 1995, 14, 255-273.
28. Crain, P. F. Methods Enzymol. 1990, 193, 782-790.
29. Pomerantz, S. C.; McCloskey, J. A. Methods Enzymol. 1990, 193, 796-824.
30. Durant, P. C.; Davis, D. R. J. Mol. Biol. 1999, 285, 115-131.
31. Sundaram, M.; Crain, P. F.; Davis, D. R. J. Org. Chem. 2000, 65, 5609-5614.
32. Jucker, F. M.; Pardi, A. RNA 1995, 1, 219-222.
33. Legault, P.; Pardi, A. J. Magn. Reson. B 1994, 103, 82-86.
34. Schweisguth, D. C.; Moore, P. B. J. Mol. Biol. 1997, 267, 505-519.
35. Yarian, C. S.; Basti, M. M.; Cain, R. J.; Ansari, G.; Guenther, R. H.; Sochacka, E.; Gzerwinska, G.; Malkiewicz, A.; Agris, P. F. Nucleic Acids Res. 1999, 27, 3543-3549.