Probing a tRNA core that contributes to aminoacylation

Journal of Molecular Biology

Volumn 295, Issue 4, 2000, Pages 777-789

  Hamann, Christian S ^a   Hou, Ya Ming ^a  

^a THOMAS JEFFERSON UNIVERSITY   (United States)

Author keywords

Adenosine base triple; Co variation; Cysteine tRNA synthetase; Elongation factor Tu; tRNA(Cys)

Indexed keywords

CYSTEINE SYNTHASE; CYSTEINE TRANSFER RNA; ELONGATION FACTOR; GUANOSINE TRIPHOSPHATE; TRANSFER RNA;

AMINOACYLATION; ARTICLE; BASE PAIRING; CRYSTAL STRUCTURE; ESCHERICHIA COLI; HYDROGEN BOND; MOLECULAR MODEL; NONHUMAN; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN FOLDING; RNA STRUCTURE;

ESCHERICHIA COLI;

EID: 0034723147     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1999.3353     Document Type: Article

References (26)

1. Escherichia coli seryl-tRNA synthetase recognizes tRNA(Ser) by its characteristic tertiary structure
2. The 2.9 Å crystal structure of T. thermophilus seryl-tRNA synthetase complexed with tRNA(Ser)
3. The crystal structures of Thermus thermophilus lysyl-tRNA synthetase complexed with E. coli tRNA(Lys) and a T. thermophilus tRNA(Lys) transcript: Anticodon recognition and conformational changes upon binding of a lysyl-adenylate analogue
4. Probing the structure of RNAs in solution
5. Universal rules and idiosyncratic features in tRNA identity
6. An RNA structural determinant for tRNA recognition
7. A strategy of tRNA recognition that includes determinants of RNA structure
8. The presence of modified nucleotides is required for cloverleaf folding of a human mitochondrial tRNA
9. Structural elements that contribute to an unusual tertiary interaction in a transfer RNA
10. An unusual RNA tertiary interaction has a role for the specific aminoacylation of a transfer RNA
11. Improved methods for binding protein models in electron density maps and the location of errors in these models
12. Three-dimensional tertiary structure of yeast phenylalanine transfer RNA
13. The structural geometry of co-ordinated base changes in transfer RNA
14. Rapid and efficient site-specific mutagenesis without phenotypic selection
15. Aminoacylation of tRNA in the evolution of an aminoacyl-tRNA synthetase
16. Changing the acceptor identity of a transfer RNA by altering nucleotides in a 'variable pocket'
17. Crystal structure of the ternary complex of Phe-tRNAPhe, EF-Tu, and a GTP analog
18. The crystal structure of Cys-tRNA(Cys)-EF-Tu-GDPNP reveals general and specific features in the ternary complex and in tRNA
19. The chemical basis of adenosine conservation throughout the Tetrahymena ribozyme
20. Structure of yeast phenylalanine tRNA at 3 Å resolution
21. Structure of E. coli glutaminyl-tRNA synthetase complexed with tRNA(Gln) and ATP at 2.8 Å resolution
22. Class II aminoacyl transfer RNA synthetases: Crystal structure of yeast aspartyl-tRNA synthetase complexed with tRNA(Asp)
23. Nucleotides in yeast tRNAPhe required for the specific recognition by its cognate synthetase
24. Compilation of tRNA sequences and sequences of tRNA genes
25. Three-dimensional structure of Escherichia coli initiator tRNAfMet