Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak

Gene

Volumn 258, Issue 1-2, 2000, Pages 127-139

  Yokoyama, Katsushi ^a   Makino, Kozo ^a   Kubota, Yoshino ^a   Watanabe, Motoji ^a   Kimura, Sigenobu ^a   Yutsudo, Chikako H ^a   Kurokawa, Ken ^a   Ishii, Kazuo ^b   Hattori, Masahira ^b,c   Tatsuno, Ichiro ^c   Abe, Hiroyuki ^c   Yoh, Myonsun ^a   Iida, Tetsuya ^a   Ohnishi, Makoto ^d   Hayashi, Tetsuya ^d   Yasunaga, Teruo ^a   Honda, Takeshi ^a   Sasakawa, Chihiro ^c   Shinagawa, Hideo ^a  

^a OSAKA UNIVERSITY   (Japan)

^b KITASATO UNIVERSITY   (Japan)

^c UNIVERSITY OF TOKYO   (Japan)

^d SHINSHU UNIVERSITY SCHOOL OF MEDICINE   (Japan)

Author keywords

Attachment site; Lambdoid phage; Multiple recombination; stx1 genes

Indexed keywords

BACTERIOPHAGE DNA; SHIGA TOXIN;

ARTICLE; CONTROLLED STUDY; ESCHERICHIA COLI O157; GENE EXPRESSION REGULATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROPHAGE;

AMINO ACID SEQUENCE; ATTACHMENT SITES, MICROBIOLOGICAL; BACTERIOPHAGES; BASE SEQUENCE; DISEASE OUTBREAKS; DNA TRANSPOSABLE ELEMENTS; DNA, BACTERIAL; ESCHERICHIA COLI INFECTIONS; ESCHERICHIA COLI O157; JAPAN; LYSOGENY; MOLECULAR SEQUENCE DATA; OPEN READING FRAMES; OPERATOR REGIONS (GENETICS); PROMOTER REGIONS (GENETICS); SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; SEQUENCE HOMOLOGY, NUCLEIC ACID; SHIGA-LIKE TOXIN I; TERMINATOR REGIONS (GENETICS);

ESCHERICHIA COLI; UNIDENTIFIED BACTERIOPHAGE;

EID: 0034722626     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(00)00416-9     Document Type: Article

References (37)

1. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
2. A rapid alkaline extraction procedure for screening recombinant plasmid DNA
3. The complete genome sequence of Escherichia coli K-12
4. Proposed new nomenclature for SLT (VT) family
5. Hemorrhagic colitis associated with Escherichia coli O157:H7
6. Phage lambda's accessory genes
7. Site of action of a Vero toxin (VT2) from Escherichia coli O157:H7 and of Shiga toxin on eukaryotic ribosomes. RNA N-glycosidase activity of the toxins
8. Conservation of genome form but not sequence in the transcription antitermination determinants of bacteriophage λ, φ21 and P22
9. Transcription antitermination: the λ paradigm updated
10. The epidemiology of infections caused by Escherichia coli O157:H7, other enterohemorrhagic E. coli, and the associated hemolytic uremic syndrome
11. Repressor and Cro protein: structure, function, and role in lysogenization
12. Mitomycin immunoblot colony assay for detection of Shiga-like toxin-producing Escherichia coli in fecal samples: comparison with DNA probes
13. Nucleotide sequence analysis of the structural genes for Shiga-like toxin I encoded by bacteriophage 933J from Escherichia coli
14. The primary structure of the operons coding for Shigella dysenteriae toxin and temperate phage H30 shiga-like toxin
15. Complete nucleotide sequences of 93-kb and 3.3-kb plasmids of an enterohemorrhagic Escherichia coli O157:H7 derived from Sakai outbreak
16. Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak
17. Induction of prophages of enterohemorrhagic Escherichia coli O157:H7 with norfloxacin
18. Complete sequence of IS629
19. Sequence analysis of Stx2-converting phage VT2-Sa shows a great divergence in early regulation and replication regions
20. Factors influencing heat-labile Escherichia coli enterotoxin activity
21. Functional and genetic analysis of regulatory regions of coliphage H-19B: location of Shiga-like toxin and lysis genes suggest a role for phage functions in toxin release
22. A segment of the phage HK022 chromosome is a mosaic of other lambdoid chromosomes
23. Shiga and Shiga-like toxins
24. Shiga-like toxin converting phage of enterohemorrhagic Escherichia coli strain 933
25. Interaction of Shiga toxins with endothelial cells
26. Sequence of Shiga toxin 2 phage 933W from Escherichia coli O157:H7: Shiga toxin as a phage late-gene product
27. Superinfection exclusion (sieB) genes of bacteriophages P22 and λ
28. Nucleotide sequence of bacteriophage λ DNA
29. Primary structure of the phage P22 repressor and its gene c2
30. Characterization and sequencing of the region containing gene N, the nutL site and t(L1) terminator of bacteriophage φ80
31. Complete genomic sequence of the lytic bacteriophage DT1 of Streptococcus thermophilus
32. Outbreaks of enterohaemorrhagic Escherichia coli O157:H7 infection by two different genotype strains in Japan, 1996
33. Specialized transduction
34. Establishment of repressor synthesis
35. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors
36. Inhibition of Escherichia coli RecA coprotease activities by DinI