Ligand-induced changes in the structure and dynamics of a human class mu glutathione S-transferase

Biochemistry

Volumn 39, Issue 25, 2000, Pages 7343-7356

  McCallum, Scott A ^b,c   Hitchens, T Kevin ^a   Torborg, Christine ^a   Rule, Gordon S ^a  

^a CARNEGIE MELLON UNIVERSITY   (United States)

^b UNIVERSITY OF VIRGINIA   (United States)

^c UNIVERSITY OF COLORADO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GLUTATHIONE; GLUTATHIONE TRANSFERASE; LIGAND;

ARTICLE; BINDING SITE; CATALYSIS; CONFORMATIONAL TRANSITION; ENZYME INHIBITOR COMPLEX; ENZYME METABOLISM; ENZYME SUBSTRATE COMPLEX; LIGAND BINDING; NONHUMAN; PRIORITY JOURNAL; PROTEIN STRUCTURE;

BINDING SITES; GLUTATHIONE TRANSFERASE; HUMANS; KINETICS; LIGANDS; MAGNETIC RESONANCE SPECTROSCOPY; MODELS, MOLECULAR; PROTEIN CONFORMATION;

EID: 0034720772     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi992767d     Document Type: Article

References (53)

1. Armstrong, R. N. (1997) Chem. Res. Toxicol. 10, 2-18.
2. Eaton, D. L., and Bammler, T. K. (1999) Toxicol. Sci. 49, 156-164.
3. Salinas, A. E., and Wong, M. G. (1999) Curr. Med. Chem. 6, 279-309.
4. Rushmore, T. H., and Pickett, C. B. (1993) J. Biol. Chem. 268, 11475-11478.
5. Bruns, C. M., Hubatsch, I., Ridderstrom, M., Mannervik, B., and Tainer, J. A. (1999) J. Mol. Biol. 288, 427-439.
6. Cameron, A. D., Sinning, I., L'Hermite, G., Olin, B., Board, P. G., Mannervik, B., and Jones, T. A. (1995) Structure 15, 717-727.
7. Sinning, I., Kleywegt, G. J., Cowan, S. W., Reinemer, P., Dirr, H. W., Huber, R., Gilliland, G. L., Armstrong, R. N., Ji, X., Board, P. G., Olin, B., Mannervik, B., and Jones, T. A. (1993) J. Mol. Biol. 232, 192-212.
8. Patskovska, L. N., Fedorov, A. A., Patskovsky, Y. V., Almo, S. C., and Listowsky, I. (1998) Acta Crystallogr., Sect. D: Biol. Crystallogr. 54, 458-460.
9. Raghunathan, S., Chandross, R. J., Kretsinger, R. H., Allison, T. J., Penington, C. J., and Rule, G. S. (1994) J. Mol. Biol. 238, 815-832.
10. Sun, Y. J., Kuan, I. C., Tam, M. F., and Hsiao, C. D. (1998) J. Mol. Biol. 278, 239-252.
11. Ji, X., Zhang, P., Armstrong, R. N., and Gilliland, G. L. (1992) Biochemistry 31, 10169-10184.
12. Ji, X., Armstrong, R. N., and Gilliland, G. L. (1993) Biochemistry 32, 12949-12954.
13. Oakley, A. J., Lo Bello, M., Ricci, G., Federici, G., and Parker, M. W. (1998) Biochemistry 37, 9912-9917.
14. Reinemer, P., Dirr, H. W., Ladenstein, R., Huber, R., Lo Bello, M., Federici, G., and Parker, M. W. (1992) J. Mol. Biol. 227, 214-226.
15. Rossjohn, J., McKinstry, W. J., Oakley, A. J., Verger, D., Flanagan, J., Chelvanayagam, G., Tan, K. L., Board, P. G., and Parker, M. W. (1998) Structure 6, 309-322.
16. Dirr, H., Reinemer, P., and Huber, R. (1994) Eur. J. Biochem. 220, 645-661.
17. Board, P. G., Coggan, M., Wilce, M. C., and Parker, M. W. (1995) Biochem. J. 311, 247-250.
18. McCallum, S. A., Hitchens, T. K., and Rule, G. S. (1999) J. Mol. Biol. 285, 2119-2132.
19. Johnson, W. W., Liu, S., Gilliand, G. L., and Armstrong, R. N. (1993) J. Biol. Chem. 268, 11508-11511.
20. Penington, C. J., and Rule, G. S. (1992) Biochemistry 31, 2912-2920.
21. Peng, J. W., and Wagner, G. (1994) Nuclear Magnetic Resonance Probes of Molecular Dynamics (Tycko, R., Ed.) pp 373-454, Kluwer Academic Publishers, Dordrecht, The Netherlands.
22. Palmer, A. G. (1997) Curr. Opin. Struct. Biol. 7, 732-737.
23. Lipari, G., and Szabo, A. J. (1982) J. Am. Chem. Soc. 104, 4546-4559.
24. Clore, G. M., Szabo, A., Bax, A., Kay, L. E., Driscoll, P. C., and Gronenborn, A. M. (1990) J. Am. Chem. Soc. 112, 4989-4991.
25. Mandel, A. M., Akke, M., and Palmer, A. G. (1995) J. Mol. Biol. 246, 144-163.
26. Bothner-By, A. A., Gayathri, C., van Zijl, P. C. M., Maclean, C., Lai, J.-J., and Smith, K. M. (1985) Magn. Reson. Chem. 23, 935-938.
27. Tjandra, N., Omichinski, J. G., Gronenborn, A. M., Clore, G. M., and Bax, A. (1997) Nat. Struct. Biol. 4, 732-738.
28. Hansen, M. R., Rance, M., and Pardi, A. (1998) J. Am. Chem. Soc. 120, 11210-11211.
29. Tolman, J. R., Flanagan, J. M., Kennedy, M. A., and Prestegrad, J. H. (1997) Nat. Struct. Biol. 4, 292-297.
30. Woodward, C. K., and Hilton, B. D. (1979) Annu. Rev. Biophys. Bioeng. 8, 99-127.
31. Englanger, S. W., Englander, J. J., McKinnie, E. R., Ackers, G. K., Turner, G. J., Westrick, J. A., and Gill, S. J. (1992) Science 256, 1684-1687.
32. Miller, D. W., and Dill, K. A. (1995) Protein Sci. 4, 1860-1873.
33. Williams, D. C., Benjamin, D. C., Poljak, R. J., and Rule, G. S. (1996) J. Mol. Biol. 257, 866-876.
34. Freire, E. (1999) Proc. Natl. Acad. Sci. U.S.A. 96, 10118-10122.
35. Schramm, V. L., McCluskey, R., Emig, F. A., and Litwack, G. (1984) J. Biol. Chem. 259, 714-722.
36. Kunkel, T. A., Bebenek, K., and McClary, J. (1991) Methods Enzymol. 204, 125-139.
37. Habig, W. H., and Jakoby, W. B. (1981) Methods Enzymol. 77, 398-405.
38. Segel, I. H. (1975) Enzyme Kinetics, John Wiley, New York.
39. Johnson, M. L., and Frasier, S. G. (1985) Methods Enzymol. 117, 301-342.
40. Marion, D., Ikura, M., and Bax, A. (1989) J. Magn. Reson. 84, 425-430.
41. Bax, A., and Pochapsky, S. S. (1992) J. Magn. Reson. 99, 638-643.
42. Sklenář, V., Piotto, M., Leppik, R., and Saudek, V. (1993) J. Magn. Reson. 102, 241-245.
43. Case, D. A. (1995) J. Biomol. NMR 6, 341-346.
44. Bax, A., Ikura, M., Kay, L. E., Torchia, D. A., and Tschudin, R. (1990) J. Magn. Reson. 86, 304-318.
45. McConnell, H. M. (1958) J. Chem. Phys. 28, 430-434.
46. Lian, L.-Y., and Roberts, G. C. K. (1993) in NMR of Macromolecules (Roberts, G. C. K., Ed.) pp 153-182, IRL Press, Oxford, U.K.
47. Farrow, N. A., Muhandiram, R., Singer, A. U., Pascal, S. M., Kay, C. M., Gish, G., Shoelson, S. E., Pawson, T., Forman-Kay, J. D., and Kay, L. E. (1994) Biochemistry 33, 5984-6003.
48. Hansen, M. R., Mueller, L., and Pardi, A. (1998) Nat. Struct. Biol. 5, 1065-1074.
49. Tjandra, N., Grzesiek, S., and Bax, A. (1996) J. Am. Chem. Soc. 118, 6264-6272.
50. Brunger, A. T. (1992) X-PLOR, A system for X-ray Crystallography and NMR, Yale University Press, New Haven, CT.
51. Fersht, A. (1985) Enzyme Structure and Mechanism, Freeman Press, New York.
52. Kay, L. E., Torchia, D. A., and Bax, A. (1989) Biochemistry 28, 8972-8979.
53. Fushman, D., Tjandra, N., and Cowburn, D. (1998) J. Am. Chem. Soc. 120, 10947-10952.